Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC1.81□□□□□ -2.12
MACF1Q9UPN3 MEG8-217ENST00000556637 924 ntTSL 5 BASIC1.81□□□□□ -2.12
MACF1Q9UPN3 AL033523.1-201ENST00000605153 153 ntBASIC1.81□□□□□ -2.12
MACF1Q9UPN3 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
MACF1Q9UPN3 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
MACF1Q9UPN3 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC1.81□□□□□ -2.12
MACF1Q9UPN3 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC1.81□□□□□ -2.12
MACF1Q9UPN3 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC1.81□□□□□ -2.12
MACF1Q9UPN3 OR8B9P-202ENST00000642028 5216 ntBASIC1.81□□□□□ -2.12
MACF1Q9UPN3 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC1.81□□□□□ -2.12
MACF1Q9UPN3 PTPRB-201ENST00000261266 6110 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
MACF1Q9UPN3 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC1.81□□□□□ -2.12
MACF1Q9UPN3 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
MACF1Q9UPN3 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
MACF1Q9UPN3 MIR1287-201ENST00000408492 90 ntBASIC1.81□□□□□ -2.12
MACF1Q9UPN3 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC1.81□□□□□ -2.12
MACF1Q9UPN3 RPS20P22-201ENST00000473700 357 ntBASIC1.81□□□□□ -2.12
MACF1Q9UPN3 OR2A20P-203ENST00000498397 1268 ntBASIC1.81□□□□□ -2.12
MACF1Q9UPN3 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC1.81□□□□□ -2.12
MACF1Q9UPN3 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
MACF1Q9UPN3 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC1.81□□□□□ -2.12
MACF1Q9UPN3 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC1.81□□□□□ -2.12
MACF1Q9UPN3 MIR4276-201ENST00000584832 70 ntBASIC1.81□□□□□ -2.12
MACF1Q9UPN3 OR7A19P-201ENST00000608051 733 ntBASIC1.81□□□□□ -2.12
MACF1Q9UPN3 FP236240.3-201ENST00000623061 327 ntBASIC1.81□□□□□ -2.12
MACF1Q9UPN3 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC1.81□□□□□ -2.12
MACF1Q9UPN3 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
MACF1Q9UPN3 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC1.81□□□□□ -2.12
MACF1Q9UPN3 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC1.81□□□□□ -2.12
MACF1Q9UPN3 DNAH1-201ENST00000420323 13104 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
MACF1Q9UPN3 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC1.81□□□□□ -2.12
MACF1Q9UPN3 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC1.81□□□□□ -2.12
MACF1Q9UPN3 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC1.81□□□□□ -2.12
MACF1Q9UPN3 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC1.81□□□□□ -2.12
MACF1Q9UPN3 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
MACF1Q9UPN3 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC1.81□□□□□ -2.12
MACF1Q9UPN3 RNA5SP36-201ENST00000410197 133 ntBASIC1.81□□□□□ -2.12
MACF1Q9UPN3 RN7SKP235-201ENST00000410662 305 ntBASIC1.81□□□□□ -2.12
MACF1Q9UPN3 CRIP1P1-201ENST00000427567 185 ntBASIC1.81□□□□□ -2.12
MACF1Q9UPN3 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC1.81□□□□□ -2.12
MACF1Q9UPN3 AC116562.1-201ENST00000485355 781 ntBASIC1.81□□□□□ -2.12
MACF1Q9UPN3 MIR5680-201ENST00000577577 84 ntBASIC1.81□□□□□ -2.12
MACF1Q9UPN3 AC007998.5-201ENST00000622938 237 ntBASIC1.81□□□□□ -2.12
MACF1Q9UPN3 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC1.81□□□□□ -2.12
MACF1Q9UPN3 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC1.81□□□□□ -2.12
MACF1Q9UPN3 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
MACF1Q9UPN3 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
MACF1Q9UPN3 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
MACF1Q9UPN3 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
MACF1Q9UPN3 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
MACF1Q9UPN3 AL590004.4-201ENST00000566733 7060 ntBASIC1.81□□□□□ -2.12
MACF1Q9UPN3 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC1.81□□□□□ -2.12
MACF1Q9UPN3 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
MACF1Q9UPN3 HDGFL3-201ENST00000299633 12733 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
MACF1Q9UPN3 MIR331-201ENST00000362302 94 ntBASIC1.8□□□□□ -2.12
MACF1Q9UPN3 RNA5SP374-201ENST00000362939 125 ntBASIC1.8□□□□□ -2.12
MACF1Q9UPN3 IGKV1OR9-1-201ENST00000424370 284 ntBASIC1.8□□□□□ -2.12
MACF1Q9UPN3 AC005326.1-201ENST00000429197 123 ntBASIC1.8□□□□□ -2.12
MACF1Q9UPN3 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC1.8□□□□□ -2.12
MACF1Q9UPN3 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC1.8□□□□□ -2.12
MACF1Q9UPN3 HCG14-201ENST00000444986 413 ntTSL 2 BASIC1.8□□□□□ -2.12
MACF1Q9UPN3 EIF4A1P11-201ENST00000451239 222 ntBASIC1.8□□□□□ -2.12
MACF1Q9UPN3 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC1.8□□□□□ -2.12
MACF1Q9UPN3 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.8□□□□□ -2.12
MACF1Q9UPN3 AC010424.2-201ENST00000607594 443 ntBASIC1.8□□□□□ -2.12
MACF1Q9UPN3 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC1.8□□□□□ -2.12
MACF1Q9UPN3 PRDM2-203ENST00000343137 5797 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
MACF1Q9UPN3 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC1.8□□□□□ -2.12
MACF1Q9UPN3 HIVEP2-202ENST00000367603 9724 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
MACF1Q9UPN3 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
MACF1Q9UPN3 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
MACF1Q9UPN3 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC1.8□□□□□ -2.12
MACF1Q9UPN3 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
MACF1Q9UPN3 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
MACF1Q9UPN3 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
MACF1Q9UPN3 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC1.8□□□□□ -2.12
MACF1Q9UPN3 SNHG14-226ENST00000640631 13074 ntTSL 5 BASIC1.8□□□□□ -2.12
MACF1Q9UPN3 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
MACF1Q9UPN3 AC007066.1-201ENST00000392902 381 ntBASIC1.8□□□□□ -2.12
MACF1Q9UPN3 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC1.8□□□□□ -2.12
MACF1Q9UPN3 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC1.8□□□□□ -2.12
MACF1Q9UPN3 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.8□□□□□ -2.12
MACF1Q9UPN3 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC1.8□□□□□ -2.12
MACF1Q9UPN3 AC087276.1-201ENST00000529659 480 ntBASIC1.8□□□□□ -2.12
MACF1Q9UPN3 OR11H5P-201ENST00000554039 926 ntBASIC1.8□□□□□ -2.12
MACF1Q9UPN3 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC1.8□□□□□ -2.12
MACF1Q9UPN3 AL391497.1-201ENST00000608671 547 ntBASIC1.8□□□□□ -2.12
MACF1Q9UPN3 ABBA01000935.2-201ENST00000637477 838 ntBASIC1.8□□□□□ -2.12
MACF1Q9UPN3 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC1.8□□□□□ -2.12
MACF1Q9UPN3 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
MACF1Q9UPN3 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
MACF1Q9UPN3 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
MACF1Q9UPN3 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
MACF1Q9UPN3 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC1.8□□□□□ -2.12
MACF1Q9UPN3 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC1.8□□□□□ -2.12
MACF1Q9UPN3 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
MACF1Q9UPN3 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC1.8□□□□□ -2.12
MACF1Q9UPN3 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC1.8□□□□□ -2.12
MACF1Q9UPN3 ZNF365-204ENST00000395251 2695 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
MACF1Q9UPN3 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms