Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 MTATP6P24-201ENST00000576835 677 ntBASIC5.79□□□□□ -1.48
COL20A1Q9P218 SS18L2P2-201ENST00000583960 235 ntBASIC5.79□□□□□ -1.48
COL20A1Q9P218 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.79□□□□□ -1.48
COL20A1Q9P218 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.79□□□□□ -1.48
COL20A1Q9P218 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC5.79□□□□□ -1.48
COL20A1Q9P218 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
COL20A1Q9P218 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.79□□□□□ -1.48
COL20A1Q9P218 AC073569.3-201ENST00000619055 682 ntBASIC5.79□□□□□ -1.48
COL20A1Q9P218 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.79□□□□□ -1.48
COL20A1Q9P218 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
COL20A1Q9P218 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
COL20A1Q9P218 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
COL20A1Q9P218 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
COL20A1Q9P218 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
COL20A1Q9P218 AC017007.4-201ENST00000503353 1352 ntBASIC5.79□□□□□ -1.48
COL20A1Q9P218 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.79□□□□□ -1.48
COL20A1Q9P218 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.79□□□□□ -1.48
COL20A1Q9P218 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.78□□□□□ -1.48
COL20A1Q9P218 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.78□□□□□ -1.48
COL20A1Q9P218 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
COL20A1Q9P218 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.78□□□□□ -1.48
COL20A1Q9P218 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
COL20A1Q9P218 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.78□□□□□ -1.48
COL20A1Q9P218 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
COL20A1Q9P218 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
COL20A1Q9P218 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
COL20A1Q9P218 ZNF29P-201ENST00000225587 168 ntBASIC5.78□□□□□ -1.48
COL20A1Q9P218 METTL21EP-201ENST00000298105 713 ntBASIC5.78□□□□□ -1.48
COL20A1Q9P218 RNU6-236P-201ENST00000363886 106 ntBASIC5.78□□□□□ -1.48
COL20A1Q9P218 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
COL20A1Q9P218 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.78□□□□□ -1.48
COL20A1Q9P218 RNU6-532P-201ENST00000384318 107 ntBASIC5.78□□□□□ -1.48
COL20A1Q9P218 RNU6-452P-201ENST00000384406 107 ntBASIC5.78□□□□□ -1.48
COL20A1Q9P218 SNORA66-201ENST00000384792 133 ntBASIC5.78□□□□□ -1.48
COL20A1Q9P218 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
COL20A1Q9P218 RNU6-244P-201ENST00000391028 104 ntBASIC5.78□□□□□ -1.48
COL20A1Q9P218 RNU6-932P-201ENST00000391108 106 ntBASIC5.78□□□□□ -1.48
COL20A1Q9P218 RNA5SP241-201ENST00000391326 114 ntBASIC5.78□□□□□ -1.48
COL20A1Q9P218 DNAJC19P6-201ENST00000401853 280 ntBASIC5.78□□□□□ -1.48
COL20A1Q9P218 AL136131.1-201ENST00000406079 803 ntBASIC5.78□□□□□ -1.48
COL20A1Q9P218 AL139128.1-201ENST00000413921 941 ntBASIC5.78□□□□□ -1.48
COL20A1Q9P218 AL354868.1-201ENST00000417077 482 ntBASIC5.78□□□□□ -1.48
COL20A1Q9P218 HSPD1P12-201ENST00000429127 1069 ntBASIC5.78□□□□□ -1.48
COL20A1Q9P218 MTCYBP15-201ENST00000433123 1127 ntBASIC5.78□□□□□ -1.48
COL20A1Q9P218 AL590399.4-201ENST00000436561 601 ntBASIC5.78□□□□□ -1.48
COL20A1Q9P218 RPL7P11-201ENST00000437586 658 ntBASIC5.78□□□□□ -1.48
COL20A1Q9P218 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC5.78□□□□□ -1.48
COL20A1Q9P218 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC5.78□□□□□ -1.48
COL20A1Q9P218 TPTE2P3-201ENST00000441562 1189 ntBASIC5.78□□□□□ -1.48
COL20A1Q9P218 HSFY3P-201ENST00000444242 1191 ntBASIC5.78□□□□□ -1.48
COL20A1Q9P218 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.78□□□□□ -1.48
COL20A1Q9P218 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC5.78□□□□□ -1.48
COL20A1Q9P218 SEPT14P24-201ENST00000447236 180 ntBASIC5.78□□□□□ -1.48
COL20A1Q9P218 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC5.78□□□□□ -1.48
COL20A1Q9P218 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
COL20A1Q9P218 SNORD11.1-201ENST00000459482 85 ntBASIC5.78□□□□□ -1.48
COL20A1Q9P218 AC092324.1-201ENST00000468671 324 ntBASIC5.78□□□□□ -1.48
COL20A1Q9P218 COX6B1P2-201ENST00000489624 230 ntBASIC5.78□□□□□ -1.48
COL20A1Q9P218 RPS27AP16-201ENST00000492222 470 ntBASIC5.78□□□□□ -1.48
COL20A1Q9P218 RN7SL244P-201ENST00000493405 297 ntBASIC5.78□□□□□ -1.48
COL20A1Q9P218 RPSAP51-201ENST00000497462 645 ntBASIC5.78□□□□□ -1.48
COL20A1Q9P218 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
COL20A1Q9P218 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC5.78□□□□□ -1.48
COL20A1Q9P218 HMGB1P1-201ENST00000522557 636 ntBASIC5.78□□□□□ -1.48
COL20A1Q9P218 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.78□□□□□ -1.48
COL20A1Q9P218 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.78□□□□□ -1.48
COL20A1Q9P218 LRRC6P1-201ENST00000532188 885 ntBASIC5.78□□□□□ -1.48
COL20A1Q9P218 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC5.78□□□□□ -1.48
COL20A1Q9P218 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.78□□□□□ -1.48
COL20A1Q9P218 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
COL20A1Q9P218 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
COL20A1Q9P218 AC027455.1-201ENST00000574104 594 ntBASIC5.78□□□□□ -1.48
COL20A1Q9P218 RN7SL290P-201ENST00000578661 300 ntBASIC5.78□□□□□ -1.48
COL20A1Q9P218 RN7SL622P-201ENST00000585292 275 ntBASIC5.78□□□□□ -1.48
COL20A1Q9P218 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC5.78□□□□□ -1.48
COL20A1Q9P218 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.78□□□□□ -1.48
COL20A1Q9P218 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC5.78□□□□□ -1.48
COL20A1Q9P218 AL160237.3-201ENST00000604114 1013 ntBASIC5.78□□□□□ -1.48
COL20A1Q9P218 AL136295.6-201ENST00000610486 658 ntBASIC5.78□□□□□ -1.48
COL20A1Q9P218 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.78□□□□□ -1.48
COL20A1Q9P218 AL356863.1-201ENST00000623378 1080 ntBASIC5.78□□□□□ -1.48
COL20A1Q9P218 AC011815.3-201ENST00000624194 473 ntBASIC5.78□□□□□ -1.48
COL20A1Q9P218 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
COL20A1Q9P218 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
COL20A1Q9P218 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
COL20A1Q9P218 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
COL20A1Q9P218 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.78□□□□□ -1.48
COL20A1Q9P218 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.78□□□□□ -1.48
COL20A1Q9P218 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.77□□□□□ -1.48
COL20A1Q9P218 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
COL20A1Q9P218 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.77□□□□□ -1.49
COL20A1Q9P218 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
COL20A1Q9P218 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
COL20A1Q9P218 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
COL20A1Q9P218 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.77□□□□□ -1.49
COL20A1Q9P218 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
COL20A1Q9P218 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
COL20A1Q9P218 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
COL20A1Q9P218 AC007618.1-201ENST00000366455 732 ntBASIC5.77□□□□□ -1.49
COL20A1Q9P218 OR1L6-202ENST00000373684 1044 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 151.2 ms