Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC4.61□□□□□ -1.67
NDE1Q9NXR1 SSR3-208ENST00000496050 579 ntTSL 4 BASIC4.61□□□□□ -1.67
NDE1Q9NXR1 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.61□□□□□ -1.67
NDE1Q9NXR1 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC4.61□□□□□ -1.67
NDE1Q9NXR1 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.61□□□□□ -1.67
NDE1Q9NXR1 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.61□□□□□ -1.67
NDE1Q9NXR1 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.61□□□□□ -1.67
NDE1Q9NXR1 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.61□□□□□ -1.67
NDE1Q9NXR1 OR4V1P-201ENST00000525394 1140 ntBASIC4.61□□□□□ -1.67
NDE1Q9NXR1 AP003049.1-201ENST00000529418 457 ntBASIC4.61□□□□□ -1.67
NDE1Q9NXR1 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC4.61□□□□□ -1.67
NDE1Q9NXR1 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC4.61□□□□□ -1.67
NDE1Q9NXR1 AC122134.1-202ENST00000569111 1201 ntBASIC4.61□□□□□ -1.67
NDE1Q9NXR1 AL138895.2-201ENST00000603019 178 ntBASIC4.61□□□□□ -1.67
NDE1Q9NXR1 AC098483.2-201ENST00000603158 454 ntBASIC4.61□□□□□ -1.67
NDE1Q9NXR1 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.61□□□□□ -1.67
NDE1Q9NXR1 SUGT1P3-202ENST00000604259 383 ntBASIC4.61□□□□□ -1.67
NDE1Q9NXR1 HMGB1P51-201ENST00000605166 638 ntBASIC4.61□□□□□ -1.67
NDE1Q9NXR1 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC4.61□□□□□ -1.67
NDE1Q9NXR1 AL158196.1-201ENST00000616786 434 ntBASIC4.61□□□□□ -1.67
NDE1Q9NXR1 LINC00901.1-201ENST00000617252 152 ntBASIC4.61□□□□□ -1.67
NDE1Q9NXR1 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.61□□□□□ -1.67
NDE1Q9NXR1 AL359757.1-201ENST00000623176 255 ntBASIC4.61□□□□□ -1.67
NDE1Q9NXR1 AP006248.3-201ENST00000623580 594 ntBASIC4.61□□□□□ -1.67
NDE1Q9NXR1 AL353662.3-201ENST00000625131 237 ntBASIC4.61□□□□□ -1.67
NDE1Q9NXR1 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NDE1Q9NXR1 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NDE1Q9NXR1 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC4.61□□□□□ -1.67
NDE1Q9NXR1 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
NDE1Q9NXR1 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
NDE1Q9NXR1 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NDE1Q9NXR1 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
NDE1Q9NXR1 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
NDE1Q9NXR1 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NDE1Q9NXR1 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
NDE1Q9NXR1 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.6□□□□□ -1.67
NDE1Q9NXR1 AC107027.3-201ENST00000565095 3473 ntBASIC4.6□□□□□ -1.67
NDE1Q9NXR1 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
NDE1Q9NXR1 RN7SKP124-201ENST00000364730 341 ntBASIC4.6□□□□□ -1.67
NDE1Q9NXR1 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
NDE1Q9NXR1 AL391422.1-201ENST00000402155 436 ntBASIC4.6□□□□□ -1.67
NDE1Q9NXR1 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.6□□□□□ -1.67
NDE1Q9NXR1 AC074367.1-201ENST00000438685 1125 ntBASIC4.6□□□□□ -1.67
NDE1Q9NXR1 AC011753.3-201ENST00000443436 406 ntBASIC4.6□□□□□ -1.67
NDE1Q9NXR1 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC4.6□□□□□ -1.67
NDE1Q9NXR1 RPL31P20-201ENST00000449593 360 ntBASIC4.6□□□□□ -1.67
NDE1Q9NXR1 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.6□□□□□ -1.67
NDE1Q9NXR1 RPL35AP19-201ENST00000469425 329 ntBASIC4.6□□□□□ -1.67
NDE1Q9NXR1 RN7SL97P-201ENST00000486780 299 ntBASIC4.6□□□□□ -1.67
NDE1Q9NXR1 RNU6-491P-201ENST00000516099 110 ntBASIC4.6□□□□□ -1.67
NDE1Q9NXR1 AC090151.1-201ENST00000520784 730 ntBASIC4.6□□□□□ -1.67
NDE1Q9NXR1 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.6□□□□□ -1.67
NDE1Q9NXR1 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
NDE1Q9NXR1 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC4.6□□□□□ -1.67
NDE1Q9NXR1 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC4.6□□□□□ -1.67
NDE1Q9NXR1 CKS1BP1-201ENST00000555221 240 ntBASIC4.6□□□□□ -1.67
NDE1Q9NXR1 AC092868.3-201ENST00000560515 784 ntBASIC4.6□□□□□ -1.67
NDE1Q9NXR1 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
NDE1Q9NXR1 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NDE1Q9NXR1 AC005726.4-201ENST00000582858 458 ntBASIC4.6□□□□□ -1.67
NDE1Q9NXR1 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.6□□□□□ -1.67
NDE1Q9NXR1 AC108865.2-201ENST00000606881 432 ntBASIC4.6□□□□□ -1.67
NDE1Q9NXR1 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC4.6□□□□□ -1.67
NDE1Q9NXR1 AL096712.1-201ENST00000614561 159 ntBASIC4.6□□□□□ -1.67
NDE1Q9NXR1 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.6□□□□□ -1.67
NDE1Q9NXR1 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC4.6□□□□□ -1.67
NDE1Q9NXR1 AC106858.1-201ENST00000637497 429 ntBASIC4.6□□□□□ -1.67
NDE1Q9NXR1 AL136164.3-201ENST00000624429 3978 ntBASIC4.6□□□□□ -1.67
NDE1Q9NXR1 AC083899.2-201ENST00000423285 1376 ntBASIC4.6□□□□□ -1.67
NDE1Q9NXR1 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.6□□□□□ -1.67
NDE1Q9NXR1 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
NDE1Q9NXR1 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
NDE1Q9NXR1 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.59□□□□□ -1.67
NDE1Q9NXR1 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
NDE1Q9NXR1 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
NDE1Q9NXR1 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
NDE1Q9NXR1 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
NDE1Q9NXR1 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC4.59□□□□□ -1.67
NDE1Q9NXR1 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.59□□□□□ -1.67
NDE1Q9NXR1 MIR365B-201ENST00000362317 111 ntBASIC4.59□□□□□ -1.67
NDE1Q9NXR1 RNA5SP52-201ENST00000362448 134 ntBASIC4.59□□□□□ -1.67
NDE1Q9NXR1 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
NDE1Q9NXR1 RNU6-1320P-201ENST00000390838 107 ntBASIC4.59□□□□□ -1.67
NDE1Q9NXR1 RNU6-1269P-201ENST00000391139 107 ntBASIC4.59□□□□□ -1.67
NDE1Q9NXR1 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
NDE1Q9NXR1 AL356057.1-202ENST00000402263 756 ntBASIC4.59□□□□□ -1.67
NDE1Q9NXR1 SNORA11B-201ENST00000408175 129 ntBASIC4.59□□□□□ -1.67
NDE1Q9NXR1 RNA5SP345-201ENST00000410646 108 ntBASIC4.59□□□□□ -1.67
NDE1Q9NXR1 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.59□□□□□ -1.67
NDE1Q9NXR1 GSTM3P2-201ENST00000412746 530 ntBASIC4.59□□□□□ -1.67
NDE1Q9NXR1 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
NDE1Q9NXR1 VN2R3P-201ENST00000422626 1412 ntBASIC4.59□□□□□ -1.67
NDE1Q9NXR1 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.59□□□□□ -1.67
NDE1Q9NXR1 HMGN1P2-201ENST00000445197 310 ntBASIC4.59□□□□□ -1.67
NDE1Q9NXR1 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC4.59□□□□□ -1.67
NDE1Q9NXR1 AC000111.2-201ENST00000448200 210 ntBASIC4.59□□□□□ -1.67
NDE1Q9NXR1 AP002345.1-201ENST00000456493 928 ntBASIC4.59□□□□□ -1.67
NDE1Q9NXR1 RNU6-599P-201ENST00000459383 107 ntBASIC4.59□□□□□ -1.67
NDE1Q9NXR1 RNU6-1193P-201ENST00000459461 107 ntBASIC4.59□□□□□ -1.67
NDE1Q9NXR1 AC107015.1-201ENST00000466902 747 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms