Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
BLOC1S4Q9NUP1 AC009643.2-201ENST00000603543 1448 ntBASIC5.51□□□□□ -1.53
BLOC1S4Q9NUP1 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
BLOC1S4Q9NUP1 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.51□□□□□ -1.53
BLOC1S4Q9NUP1 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
BLOC1S4Q9NUP1 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
BLOC1S4Q9NUP1 IGKV7-3-201ENST00000357453 298 ntBASIC5.51□□□□□ -1.53
BLOC1S4Q9NUP1 RN7SKP95-201ENST00000362860 303 ntBASIC5.51□□□□□ -1.53
BLOC1S4Q9NUP1 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
BLOC1S4Q9NUP1 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
BLOC1S4Q9NUP1 AL590290.1-201ENST00000405336 380 ntBASIC5.51□□□□□ -1.53
BLOC1S4Q9NUP1 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.51□□□□□ -1.53
BLOC1S4Q9NUP1 SPTLC1P2-201ENST00000407089 121 ntBASIC5.51□□□□□ -1.53
BLOC1S4Q9NUP1 RNA5SP296-201ENST00000410523 111 ntBASIC5.51□□□□□ -1.53
BLOC1S4Q9NUP1 AC093162.1-201ENST00000419682 124 ntBASIC5.51□□□□□ -1.53
BLOC1S4Q9NUP1 SEC63P1-201ENST00000425785 1258 ntBASIC5.51□□□□□ -1.53
BLOC1S4Q9NUP1 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC5.51□□□□□ -1.53
BLOC1S4Q9NUP1 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.51□□□□□ -1.53
BLOC1S4Q9NUP1 AL627308.1-201ENST00000435693 821 ntBASIC5.51□□□□□ -1.53
BLOC1S4Q9NUP1 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.51□□□□□ -1.53
BLOC1S4Q9NUP1 AL137845.2-201ENST00000444292 988 ntBASIC5.51□□□□□ -1.53
BLOC1S4Q9NUP1 AC069540.1-201ENST00000446320 988 ntBASIC5.51□□□□□ -1.53
BLOC1S4Q9NUP1 RPL31P44-201ENST00000447680 377 ntBASIC5.51□□□□□ -1.53
BLOC1S4Q9NUP1 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.51□□□□□ -1.53
BLOC1S4Q9NUP1 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.51□□□□□ -1.53
BLOC1S4Q9NUP1 RN7SL517P-201ENST00000462240 305 ntBASIC5.51□□□□□ -1.53
BLOC1S4Q9NUP1 PPIAP21-201ENST00000464473 501 ntBASIC5.51□□□□□ -1.53
BLOC1S4Q9NUP1 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC5.51□□□□□ -1.53
BLOC1S4Q9NUP1 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.51□□□□□ -1.53
BLOC1S4Q9NUP1 AC074386.1-201ENST00000476560 767 ntBASIC5.51□□□□□ -1.53
BLOC1S4Q9NUP1 RN7SL97P-201ENST00000486780 299 ntBASIC5.51□□□□□ -1.53
BLOC1S4Q9NUP1 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC5.51□□□□□ -1.53
BLOC1S4Q9NUP1 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.51□□□□□ -1.53
BLOC1S4Q9NUP1 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.51□□□□□ -1.53
BLOC1S4Q9NUP1 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC5.51□□□□□ -1.53
BLOC1S4Q9NUP1 ENPP7P9-201ENST00000514456 627 ntBASIC5.51□□□□□ -1.53
BLOC1S4Q9NUP1 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
BLOC1S4Q9NUP1 VTA1P2-201ENST00000520205 911 ntBASIC5.51□□□□□ -1.53
BLOC1S4Q9NUP1 IGLV2-28-201ENST00000520681 304 ntBASIC5.51□□□□□ -1.53
BLOC1S4Q9NUP1 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.51□□□□□ -1.53
BLOC1S4Q9NUP1 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
BLOC1S4Q9NUP1 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC5.51□□□□□ -1.53
BLOC1S4Q9NUP1 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.51□□□□□ -1.53
BLOC1S4Q9NUP1 AF230666.2-201ENST00000602328 725 ntBASIC5.51□□□□□ -1.53
BLOC1S4Q9NUP1 AC007423.1-201ENST00000605009 627 ntBASIC5.51□□□□□ -1.53
BLOC1S4Q9NUP1 AC011374.2-201ENST00000607135 526 ntBASIC5.51□□□□□ -1.53
BLOC1S4Q9NUP1 AL022401.1-201ENST00000619498 108 ntBASIC5.51□□□□□ -1.53
BLOC1S4Q9NUP1 MIR6719-201ENST00000622428 87 ntBASIC5.51□□□□□ -1.53
BLOC1S4Q9NUP1 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.51□□□□□ -1.53
BLOC1S4Q9NUP1 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
BLOC1S4Q9NUP1 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
BLOC1S4Q9NUP1 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
BLOC1S4Q9NUP1 AL731532.2-201ENST00000623542 1953 ntBASIC5.51□□□□□ -1.53
BLOC1S4Q9NUP1 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
BLOC1S4Q9NUP1 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
BLOC1S4Q9NUP1 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
BLOC1S4Q9NUP1 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
BLOC1S4Q9NUP1 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.51□□□□□ -1.53
BLOC1S4Q9NUP1 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
BLOC1S4Q9NUP1 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
BLOC1S4Q9NUP1 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
BLOC1S4Q9NUP1 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
BLOC1S4Q9NUP1 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.5□□□□□ -1.53
BLOC1S4Q9NUP1 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
BLOC1S4Q9NUP1 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.5□□□□□ -1.53
BLOC1S4Q9NUP1 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
BLOC1S4Q9NUP1 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
BLOC1S4Q9NUP1 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
BLOC1S4Q9NUP1 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
BLOC1S4Q9NUP1 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC5.5□□□□□ -1.53
BLOC1S4Q9NUP1 RNA5SP507-201ENST00000363603 121 ntBASIC5.5□□□□□ -1.53
BLOC1S4Q9NUP1 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC5.5□□□□□ -1.53
BLOC1S4Q9NUP1 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC5.5□□□□□ -1.53
BLOC1S4Q9NUP1 RNU6-317P-201ENST00000384031 107 ntBASIC5.5□□□□□ -1.53
BLOC1S4Q9NUP1 MIR92A2-201ENST00000385299 75 ntBASIC5.5□□□□□ -1.53
BLOC1S4Q9NUP1 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
BLOC1S4Q9NUP1 RN7SKP278-201ENST00000410504 342 ntBASIC5.5□□□□□ -1.53
BLOC1S4Q9NUP1 RNA5SP345-201ENST00000410646 108 ntBASIC5.5□□□□□ -1.53
BLOC1S4Q9NUP1 RN7SKP213-201ENST00000410746 298 ntBASIC5.5□□□□□ -1.53
BLOC1S4Q9NUP1 Z68694.1-201ENST00000413929 841 ntBASIC5.5□□□□□ -1.53
BLOC1S4Q9NUP1 LINC01881-201ENST00000416103 412 ntBASIC5.5□□□□□ -1.53
BLOC1S4Q9NUP1 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.5□□□□□ -1.53
BLOC1S4Q9NUP1 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.5□□□□□ -1.53
BLOC1S4Q9NUP1 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.5□□□□□ -1.53
BLOC1S4Q9NUP1 AC093414.1-201ENST00000434712 514 ntBASIC5.5□□□□□ -1.53
BLOC1S4Q9NUP1 AL590762.3-201ENST00000436372 640 ntBASIC5.5□□□□□ -1.53
BLOC1S4Q9NUP1 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC5.5□□□□□ -1.53
BLOC1S4Q9NUP1 CBX1P4-201ENST00000439415 457 ntBASIC5.5□□□□□ -1.53
BLOC1S4Q9NUP1 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.5□□□□□ -1.53
BLOC1S4Q9NUP1 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.5□□□□□ -1.53
BLOC1S4Q9NUP1 AC093166.2-201ENST00000455969 1017 ntBASIC5.5□□□□□ -1.53
BLOC1S4Q9NUP1 RPL23AP56-201ENST00000460778 453 ntBASIC5.5□□□□□ -1.53
BLOC1S4Q9NUP1 RN7SL515P-201ENST00000463999 297 ntBASIC5.5□□□□□ -1.53
BLOC1S4Q9NUP1 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC5.5□□□□□ -1.53
BLOC1S4Q9NUP1 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC5.5□□□□□ -1.53
BLOC1S4Q9NUP1 RNU6-1102P-201ENST00000516149 96 ntBASIC5.5□□□□□ -1.53
BLOC1S4Q9NUP1 RNU6-347P-201ENST00000516658 105 ntBASIC5.5□□□□□ -1.53
BLOC1S4Q9NUP1 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.5□□□□□ -1.53
BLOC1S4Q9NUP1 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC5.5□□□□□ -1.53
BLOC1S4Q9NUP1 MTND2P7-201ENST00000521337 640 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms