Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.89□□□□□ -1.63
VPS33AQ96AX1 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
VPS33AQ96AX1 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
VPS33AQ96AX1 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
VPS33AQ96AX1 AL137100.1-201ENST00000556703 1620 ntBASIC4.89□□□□□ -1.63
VPS33AQ96AX1 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
VPS33AQ96AX1 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
VPS33AQ96AX1 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
VPS33AQ96AX1 LINC01355-201ENST00000566551 5444 ntBASIC4.89□□□□□ -1.63
VPS33AQ96AX1 MTCO1P18-201ENST00000455518 1419 ntBASIC4.89□□□□□ -1.63
VPS33AQ96AX1 MAPK10-304ENST00000641341 3984 ntBASIC4.89□□□□□ -1.63
VPS33AQ96AX1 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.88□□□□□ -1.63
VPS33AQ96AX1 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
VPS33AQ96AX1 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
VPS33AQ96AX1 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
VPS33AQ96AX1 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
VPS33AQ96AX1 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
VPS33AQ96AX1 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.88□□□□□ -1.63
VPS33AQ96AX1 U3.3-201ENST00000362986 216 ntBASIC4.88□□□□□ -1.63
VPS33AQ96AX1 RNA5SP510-201ENST00000364697 99 ntBASIC4.88□□□□□ -1.63
VPS33AQ96AX1 RNA5SP339-201ENST00000390987 122 ntBASIC4.88□□□□□ -1.63
VPS33AQ96AX1 AC005522.1-201ENST00000395416 346 ntBASIC4.88□□□□□ -1.63
VPS33AQ96AX1 RPL31P52-201ENST00000407532 367 ntBASIC4.88□□□□□ -1.63
VPS33AQ96AX1 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
VPS33AQ96AX1 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC4.88□□□□□ -1.63
VPS33AQ96AX1 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.88□□□□□ -1.63
VPS33AQ96AX1 AL158050.1-201ENST00000416077 457 ntBASIC4.88□□□□□ -1.63
VPS33AQ96AX1 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.88□□□□□ -1.63
VPS33AQ96AX1 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC4.88□□□□□ -1.63
VPS33AQ96AX1 COX6CP13-201ENST00000428703 226 ntBASIC4.88□□□□□ -1.63
VPS33AQ96AX1 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC4.88□□□□□ -1.63
VPS33AQ96AX1 RPL23AP19-201ENST00000436229 369 ntBASIC4.88□□□□□ -1.63
VPS33AQ96AX1 GYG1P1-201ENST00000460864 698 ntBASIC4.88□□□□□ -1.63
VPS33AQ96AX1 AC094085.1-201ENST00000468914 584 ntBASIC4.88□□□□□ -1.63
VPS33AQ96AX1 AC006511.1-201ENST00000470614 315 ntBASIC4.88□□□□□ -1.63
VPS33AQ96AX1 AC022795.1-201ENST00000473808 480 ntBASIC4.88□□□□□ -1.63
VPS33AQ96AX1 SIAH1P1-201ENST00000479411 923 ntBASIC4.88□□□□□ -1.63
VPS33AQ96AX1 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.88□□□□□ -1.63
VPS33AQ96AX1 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC4.88□□□□□ -1.63
VPS33AQ96AX1 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC4.88□□□□□ -1.63
VPS33AQ96AX1 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.88□□□□□ -1.63
VPS33AQ96AX1 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC4.88□□□□□ -1.63
VPS33AQ96AX1 RN7SKP46-201ENST00000515942 234 ntBASIC4.88□□□□□ -1.63
VPS33AQ96AX1 RNA5SP464-201ENST00000516251 108 ntBASIC4.88□□□□□ -1.63
VPS33AQ96AX1 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC4.88□□□□□ -1.63
VPS33AQ96AX1 AC012400.1-201ENST00000518452 381 ntBASIC4.88□□□□□ -1.63
VPS33AQ96AX1 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.88□□□□□ -1.63
VPS33AQ96AX1 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
VPS33AQ96AX1 IGKV2-36-201ENST00000519999 223 ntBASIC4.88□□□□□ -1.63
VPS33AQ96AX1 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.88□□□□□ -1.63
VPS33AQ96AX1 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
VPS33AQ96AX1 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.88□□□□□ -1.63
VPS33AQ96AX1 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.88□□□□□ -1.63
VPS33AQ96AX1 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC4.88□□□□□ -1.63
VPS33AQ96AX1 AC106734.1-201ENST00000568646 663 ntBASIC4.88□□□□□ -1.63
VPS33AQ96AX1 MTND4LP24-201ENST00000572277 291 ntBASIC4.88□□□□□ -1.63
VPS33AQ96AX1 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.88□□□□□ -1.63
VPS33AQ96AX1 FO393422.1-201ENST00000603908 708 ntBASIC4.88□□□□□ -1.63
VPS33AQ96AX1 TAS2R6P-201ENST00000605022 826 ntBASIC4.88□□□□□ -1.63
VPS33AQ96AX1 AC005972.3-201ENST00000606304 481 ntBASIC4.88□□□□□ -1.63
VPS33AQ96AX1 AC006213.5-201ENST00000619673 288 ntBASIC4.88□□□□□ -1.63
VPS33AQ96AX1 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.88□□□□□ -1.63
VPS33AQ96AX1 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.88□□□□□ -1.63
VPS33AQ96AX1 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
VPS33AQ96AX1 AL596275.2-204ENST00000641628 552 ntBASIC4.88□□□□□ -1.63
VPS33AQ96AX1 AL596275.2-206ENST00000641957 626 ntBASIC4.88□□□□□ -1.63
VPS33AQ96AX1 AC107068.1-201ENST00000563286 4218 ntBASIC4.88□□□□□ -1.63
VPS33AQ96AX1 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
VPS33AQ96AX1 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.88□□□□□ -1.63
VPS33AQ96AX1 AC008432.1-201ENST00000615912 1320 ntBASIC4.88□□□□□ -1.63
VPS33AQ96AX1 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
VPS33AQ96AX1 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.88□□□□□ -1.63
VPS33AQ96AX1 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
VPS33AQ96AX1 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
VPS33AQ96AX1 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.88□□□□□ -1.63
VPS33AQ96AX1 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
VPS33AQ96AX1 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.87□□□□□ -1.63
VPS33AQ96AX1 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
VPS33AQ96AX1 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
VPS33AQ96AX1 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
VPS33AQ96AX1 SCARNA15-201ENST00000607520 4325 ntBASIC4.87□□□□□ -1.63
VPS33AQ96AX1 SCN1A-220ENST00000641603 12506 ntBASIC4.87□□□□□ -1.63
VPS33AQ96AX1 AC092162.3-201ENST00000624511 1624 ntBASIC4.87□□□□□ -1.63
VPS33AQ96AX1 AC022031.1-201ENST00000585985 2593 ntBASIC4.87□□□□□ -1.63
VPS33AQ96AX1 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
VPS33AQ96AX1 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
VPS33AQ96AX1 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
VPS33AQ96AX1 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
VPS33AQ96AX1 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
VPS33AQ96AX1 BPHL-201ENST00000380368 797 ntTSL 5 BASIC4.87□□□□□ -1.63
VPS33AQ96AX1 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC4.87□□□□□ -1.63
VPS33AQ96AX1 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
VPS33AQ96AX1 RNU1-149P-201ENST00000390870 161 ntBASIC4.87□□□□□ -1.63
VPS33AQ96AX1 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.87□□□□□ -1.63
VPS33AQ96AX1 RNU4-27P-201ENST00000410889 139 ntBASIC4.87□□□□□ -1.63
VPS33AQ96AX1 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.87□□□□□ -1.63
VPS33AQ96AX1 RPL36AP10-201ENST00000421785 322 ntBASIC4.87□□□□□ -1.63
VPS33AQ96AX1 EI24P4-201ENST00000423683 1078 ntBASIC4.87□□□□□ -1.63
VPS33AQ96AX1 RPL12P28-201ENST00000430852 489 ntBASIC4.87□□□□□ -1.63
VPS33AQ96AX1 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms