Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 RN7SKP35-201ENST00000517210 151 ntBASIC5.41□□□□□ -1.54
CD40P25942 RGS5-218ENST00000526176 574 ntTSL 4 BASIC5.41□□□□□ -1.54
CD40P25942 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC5.41□□□□□ -1.54
CD40P25942 AC073916.1-201ENST00000545095 130 ntBASIC5.41□□□□□ -1.54
CD40P25942 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.41□□□□□ -1.54
CD40P25942 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.41□□□□□ -1.54
CD40P25942 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.41□□□□□ -1.54
CD40P25942 AL121579.2-201ENST00000555466 590 ntBASIC5.41□□□□□ -1.54
CD40P25942 AC092332.1-201ENST00000563684 829 ntBASIC5.41□□□□□ -1.54
CD40P25942 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC5.41□□□□□ -1.54
CD40P25942 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC5.41□□□□□ -1.54
CD40P25942 MTATP6P3-201ENST00000581686 676 ntBASIC5.41□□□□□ -1.54
CD40P25942 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.41□□□□□ -1.54
CD40P25942 LAPTM4BP2-201ENST00000604542 446 ntBASIC5.41□□□□□ -1.54
CD40P25942 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CD40P25942 AC008115.3-201ENST00000614874 549 ntBASIC5.41□□□□□ -1.54
CD40P25942 AC018816.2-201ENST00000621460 353 ntBASIC5.41□□□□□ -1.54
CD40P25942 AC231657.1-201ENST00000624313 397 ntBASIC5.41□□□□□ -1.54
CD40P25942 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC5.41□□□□□ -1.54
CD40P25942 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC5.41□□□□□ -1.54
CD40P25942 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CD40P25942 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC5.41□□□□□ -1.54
CD40P25942 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CD40P25942 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CD40P25942 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.41□□□□□ -1.54
CD40P25942 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CD40P25942 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5.41□□□□□ -1.54
CD40P25942 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CD40P25942 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CD40P25942 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CD40P25942 EEF1A1P24-201ENST00000451469 1378 ntBASIC5.41□□□□□ -1.54
CD40P25942 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.41□□□□□ -1.54
CD40P25942 NPL-212ENST00000614468 2376 ntTSL 5 BASIC5.41□□□□□ -1.54
CD40P25942 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
CD40P25942 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CD40P25942 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.4□□□□□ -1.54
CD40P25942 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.4□□□□□ -1.54
CD40P25942 AC135352.1-201ENST00000506173 1418 ntBASIC5.4□□□□□ -1.54
CD40P25942 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
CD40P25942 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CD40P25942 AC015689.2-201ENST00000528172 1738 ntBASIC5.4□□□□□ -1.54
CD40P25942 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.4□□□□□ -1.54
CD40P25942 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
CD40P25942 QRSL1P1-201ENST00000400977 1540 ntBASIC5.4□□□□□ -1.54
CD40P25942 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.4□□□□□ -1.54
CD40P25942 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
CD40P25942 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CD40P25942 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CD40P25942 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.4□□□□□ -1.54
CD40P25942 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.4□□□□□ -1.54
CD40P25942 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CD40P25942 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CD40P25942 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CD40P25942 OR10J6P-201ENST00000289731 930 ntBASIC5.4□□□□□ -1.54
CD40P25942 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CD40P25942 RNU1-49P-201ENST00000363468 159 ntBASIC5.4□□□□□ -1.54
CD40P25942 RNU4-91P-201ENST00000364778 135 ntBASIC5.4□□□□□ -1.54
CD40P25942 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC5.4□□□□□ -1.54
CD40P25942 MIR506-201ENST00000384998 124 ntBASIC5.4□□□□□ -1.54
CD40P25942 U3.28-201ENST00000391249 210 ntBASIC5.4□□□□□ -1.54
CD40P25942 OR8V1P-201ENST00000395193 873 ntBASIC5.4□□□□□ -1.54
CD40P25942 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CD40P25942 PRRC2CP1-201ENST00000404428 159 ntBASIC5.4□□□□□ -1.54
CD40P25942 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.4□□□□□ -1.54
CD40P25942 SNORA77.2-201ENST00000408571 112 ntBASIC5.4□□□□□ -1.54
CD40P25942 AP000534.2-201ENST00000412729 568 ntBASIC5.4□□□□□ -1.54
CD40P25942 GSTM3P2-201ENST00000412746 530 ntBASIC5.4□□□□□ -1.54
CD40P25942 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.4□□□□□ -1.54
CD40P25942 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.4□□□□□ -1.54
CD40P25942 UBE2V1P14-201ENST00000415815 558 ntBASIC5.4□□□□□ -1.54
CD40P25942 AC130360.1-201ENST00000425489 1117 ntBASIC5.4□□□□□ -1.54
CD40P25942 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.4□□□□□ -1.54
CD40P25942 HSPD1P12-201ENST00000429127 1069 ntBASIC5.4□□□□□ -1.54
CD40P25942 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC5.4□□□□□ -1.54
CD40P25942 AL365184.2-201ENST00000431139 435 ntBASIC5.4□□□□□ -1.54
CD40P25942 OFD1P13Y-201ENST00000431179 1232 ntBASIC5.4□□□□□ -1.54
CD40P25942 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.4□□□□□ -1.54
CD40P25942 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
CD40P25942 FTLP19-201ENST00000433300 394 ntBASIC5.4□□□□□ -1.54
CD40P25942 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC5.4□□□□□ -1.54
CD40P25942 OR3D1P-201ENST00000438288 955 ntBASIC5.4□□□□□ -1.54
CD40P25942 HMGN1P2-201ENST00000445197 310 ntBASIC5.4□□□□□ -1.54
CD40P25942 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.4□□□□□ -1.54
CD40P25942 CFL1P4-201ENST00000451536 498 ntBASIC5.4□□□□□ -1.54
CD40P25942 AC243772.1-201ENST00000451620 410 ntBASIC5.4□□□□□ -1.54
CD40P25942 PPIAP7-201ENST00000454070 489 ntBASIC5.4□□□□□ -1.54
CD40P25942 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC5.4□□□□□ -1.54
CD40P25942 RANP2-201ENST00000456833 229 ntBASIC5.4□□□□□ -1.54
CD40P25942 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.4□□□□□ -1.54
CD40P25942 AC023818.1-201ENST00000498379 384 ntBASIC5.4□□□□□ -1.54
CD40P25942 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.4□□□□□ -1.54
CD40P25942 RNU6-488P-201ENST00000515918 99 ntBASIC5.4□□□□□ -1.54
CD40P25942 RNU6-405P-201ENST00000516637 110 ntBASIC5.4□□□□□ -1.54
CD40P25942 PTS-202ENST00000524931 696 ntTSL 3 BASIC5.4□□□□□ -1.54
CD40P25942 AP000859.1-201ENST00000525536 307 ntBASIC5.4□□□□□ -1.54
CD40P25942 AC130365.2-201ENST00000525882 1201 ntBASIC5.4□□□□□ -1.54
CD40P25942 DEFB131D-201ENST00000526803 184 ntBASIC5.4□□□□□ -1.54
CD40P25942 AP000620.1-201ENST00000527147 504 ntBASIC5.4□□□□□ -1.54
CD40P25942 AP001858.2-201ENST00000536213 601 ntBASIC5.4□□□□□ -1.54
CD40P25942 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms