Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC3.88□□□□□ -1.79
COL8A2P25067 AC068831.4-201ENST00000556118 109 ntBASIC3.88□□□□□ -1.79
COL8A2P25067 AC105036.1-201ENST00000566222 271 ntBASIC3.88□□□□□ -1.79
COL8A2P25067 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC3.88□□□□□ -1.79
COL8A2P25067 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC3.88□□□□□ -1.79
COL8A2P25067 AL356218.2-201ENST00000605264 187 ntBASIC3.88□□□□□ -1.79
COL8A2P25067 AP005019.3-201ENST00000620418 560 ntBASIC3.88□□□□□ -1.79
COL8A2P25067 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
COL8A2P25067 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
COL8A2P25067 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
COL8A2P25067 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
COL8A2P25067 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC3.88□□□□□ -1.79
COL8A2P25067 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
COL8A2P25067 RAD17P1-201ENST00000418130 2042 ntBASIC3.88□□□□□ -1.79
COL8A2P25067 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
COL8A2P25067 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
COL8A2P25067 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC3.88□□□□□ -1.79
COL8A2P25067 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
COL8A2P25067 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC3.88□□□□□ -1.79
COL8A2P25067 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC3.88□□□□□ -1.79
COL8A2P25067 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC3.88□□□□□ -1.79
COL8A2P25067 AL031119.1-201ENST00000404707 1879 ntBASIC3.88□□□□□ -1.79
COL8A2P25067 AL391684.1-202ENST00000641293 1636 ntBASIC3.88□□□□□ -1.79
COL8A2P25067 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC3.87□□□□□ -1.79
COL8A2P25067 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
COL8A2P25067 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC3.87□□□□□ -1.79
COL8A2P25067 CASC19-206ENST00000641028 1430 ntBASIC3.87□□□□□ -1.79
COL8A2P25067 MAPK10-286ENST00000641208 8747 ntBASIC3.87□□□□□ -1.79
COL8A2P25067 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC3.87□□□□□ -1.79
COL8A2P25067 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
COL8A2P25067 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
COL8A2P25067 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC3.87□□□□□ -1.79
COL8A2P25067 MIR659-201ENST00000384963 97 ntBASIC3.87□□□□□ -1.79
COL8A2P25067 AL080315.1-201ENST00000406055 466 ntBASIC3.87□□□□□ -1.79
COL8A2P25067 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
COL8A2P25067 RAB28P1-201ENST00000411517 641 ntBASIC3.87□□□□□ -1.79
COL8A2P25067 ELOCP19-201ENST00000411919 318 ntBASIC3.87□□□□□ -1.79
COL8A2P25067 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC3.87□□□□□ -1.79
COL8A2P25067 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC3.87□□□□□ -1.79
COL8A2P25067 AC091390.1-201ENST00000433904 331 ntBASIC3.87□□□□□ -1.79
COL8A2P25067 AC073143.1-201ENST00000436316 395 ntBASIC3.87□□□□□ -1.79
COL8A2P25067 RPL23AP93-201ENST00000440847 484 ntBASIC3.87□□□□□ -1.79
COL8A2P25067 AL589765.3-201ENST00000446084 462 ntBASIC3.87□□□□□ -1.79
COL8A2P25067 AL031584.1-201ENST00000447169 754 ntBASIC3.87□□□□□ -1.79
COL8A2P25067 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC3.87□□□□□ -1.79
COL8A2P25067 RPL21P126-201ENST00000470049 478 ntBASIC3.87□□□□□ -1.79
COL8A2P25067 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC3.87□□□□□ -1.79
COL8A2P25067 AC091544.1-201ENST00000484702 348 ntBASIC3.87□□□□□ -1.79
COL8A2P25067 SNORA26.10-201ENST00000516427 141 ntBASIC3.87□□□□□ -1.79
COL8A2P25067 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC3.87□□□□□ -1.79
COL8A2P25067 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
COL8A2P25067 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.87□□□□□ -1.79
COL8A2P25067 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC3.87□□□□□ -1.79
COL8A2P25067 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.87□□□□□ -1.79
COL8A2P25067 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
COL8A2P25067 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC3.87□□□□□ -1.79
COL8A2P25067 AC022106.2-201ENST00000620114 757 ntBASIC3.87□□□□□ -1.79
COL8A2P25067 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC3.87□□□□□ -1.79
COL8A2P25067 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC3.87□□□□□ -1.79
COL8A2P25067 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC3.87□□□□□ -1.79
COL8A2P25067 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
COL8A2P25067 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC3.87□□□□□ -1.79
COL8A2P25067 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
COL8A2P25067 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
COL8A2P25067 BCLAF1P2-201ENST00000624956 2609 ntBASIC3.87□□□□□ -1.79
COL8A2P25067 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
COL8A2P25067 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
COL8A2P25067 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC3.86□□□□□ -1.79
COL8A2P25067 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
COL8A2P25067 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
COL8A2P25067 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
COL8A2P25067 AL592291.1-201ENST00000403830 352 ntBASIC3.86□□□□□ -1.79
COL8A2P25067 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.86□□□□□ -1.79
COL8A2P25067 XIST-201ENST00000416330 750 ntTSL 2 BASIC3.86□□□□□ -1.79
COL8A2P25067 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC3.86□□□□□ -1.79
COL8A2P25067 RANP7-201ENST00000418085 644 ntBASIC3.86□□□□□ -1.79
COL8A2P25067 CKS1BP6-201ENST00000424932 240 ntBASIC3.86□□□□□ -1.79
COL8A2P25067 RPS12P10-201ENST00000427031 377 ntBASIC3.86□□□□□ -1.79
COL8A2P25067 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC3.86□□□□□ -1.79
COL8A2P25067 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.86□□□□□ -1.79
COL8A2P25067 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC3.86□□□□□ -1.79
COL8A2P25067 ELOCP3-201ENST00000439303 348 ntBASIC3.86□□□□□ -1.79
COL8A2P25067 Z95152.1-201ENST00000453556 656 ntBASIC3.86□□□□□ -1.79
COL8A2P25067 ISCUP1-201ENST00000454451 448 ntBASIC3.86□□□□□ -1.79
COL8A2P25067 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.86□□□□□ -1.79
COL8A2P25067 AC026979.1-201ENST00000492525 396 ntBASIC3.86□□□□□ -1.79
COL8A2P25067 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC3.86□□□□□ -1.79
COL8A2P25067 RNU6-1334P-201ENST00000516032 105 ntBASIC3.86□□□□□ -1.79
COL8A2P25067 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC3.86□□□□□ -1.79
COL8A2P25067 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC3.86□□□□□ -1.79
COL8A2P25067 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC3.86□□□□□ -1.79
COL8A2P25067 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC3.86□□□□□ -1.79
COL8A2P25067 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC3.86□□□□□ -1.79
COL8A2P25067 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC3.86□□□□□ -1.79
COL8A2P25067 AC008782.1-201ENST00000603386 430 ntBASIC3.86□□□□□ -1.79
COL8A2P25067 AC005191.1-201ENST00000603950 358 ntBASIC3.86□□□□□ -1.79
COL8A2P25067 AL445423.1-201ENST00000609941 536 ntBASIC3.86□□□□□ -1.79
COL8A2P25067 AC083809.1-201ENST00000615051 472 ntBASIC3.86□□□□□ -1.79
COL8A2P25067 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC3.86□□□□□ -1.79
COL8A2P25067 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms