Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
APPP05067 MAPK10-328ENST00000641553 4009 ntBASIC6.57□□□□□ -1.36
APPP05067 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
APPP05067 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
APPP05067 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
APPP05067 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
APPP05067 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
APPP05067 RNU1-146P-201ENST00000364015 165 ntBASIC6.57□□□□□ -1.36
APPP05067 SNORA16A-201ENST00000384342 137 ntBASIC6.57□□□□□ -1.36
APPP05067 RNU1-77P-201ENST00000390868 162 ntBASIC6.57□□□□□ -1.36
APPP05067 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC6.57□□□□□ -1.36
APPP05067 CHMP1B2P-201ENST00000399581 597 ntBASIC6.57□□□□□ -1.36
APPP05067 HMGB3P31-201ENST00000413333 595 ntBASIC6.57□□□□□ -1.36
APPP05067 TAF13P2-201ENST00000416876 286 ntBASIC6.57□□□□□ -1.36
APPP05067 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC6.57□□□□□ -1.36
APPP05067 RIMKLBP2-201ENST00000424737 654 ntBASIC6.57□□□□□ -1.36
APPP05067 RAC1P8-201ENST00000427086 527 ntBASIC6.57□□□□□ -1.36
APPP05067 HMGN2P27-201ENST00000427352 270 ntBASIC6.57□□□□□ -1.36
APPP05067 NPM1P22-201ENST00000427761 952 ntBASIC6.57□□□□□ -1.36
APPP05067 ETF1P3-201ENST00000430422 1160 ntBASIC6.57□□□□□ -1.36
APPP05067 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC6.57□□□□□ -1.36
APPP05067 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC6.57□□□□□ -1.36
APPP05067 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC6.57□□□□□ -1.36
APPP05067 THAP5P1-201ENST00000439089 262 ntBASIC6.57□□□□□ -1.36
APPP05067 RNF148-202ENST00000447240 839 ntTSL 2 BASIC6.57□□□□□ -1.36
APPP05067 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC6.57□□□□□ -1.36
APPP05067 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC6.57□□□□□ -1.36
APPP05067 HSPE1P22-201ENST00000456856 327 ntBASIC6.57□□□□□ -1.36
APPP05067 RNU7-140P-201ENST00000459546 60 ntBASIC6.57□□□□□ -1.36
APPP05067 AL133445.1-201ENST00000467051 452 ntBASIC6.57□□□□□ -1.36
APPP05067 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
APPP05067 RPS17P5-201ENST00000498293 408 ntBASIC6.57□□□□□ -1.36
APPP05067 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC6.57□□□□□ -1.36
APPP05067 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC6.57□□□□□ -1.36
APPP05067 BX510359.5-201ENST00000515651 304 ntBASIC6.57□□□□□ -1.36
APPP05067 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC6.57□□□□□ -1.36
APPP05067 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC6.57□□□□□ -1.36
APPP05067 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
APPP05067 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC6.57□□□□□ -1.36
APPP05067 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC6.57□□□□□ -1.36
APPP05067 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC6.57□□□□□ -1.36
APPP05067 AL109653.1-201ENST00000603091 248 ntBASIC6.57□□□□□ -1.36
APPP05067 AP002906.1-201ENST00000603405 233 ntBASIC6.57□□□□□ -1.36
APPP05067 AC019131.2-201ENST00000609071 870 ntBASIC6.57□□□□□ -1.36
APPP05067 AC022467.1-201ENST00000614738 749 ntBASIC6.57□□□□□ -1.36
APPP05067 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC6.57□□□□□ -1.36
APPP05067 MIR6886-201ENST00000619864 61 ntBASIC6.57□□□□□ -1.36
APPP05067 AC010435.1-201ENST00000623353 1177 ntBASIC6.57□□□□□ -1.36
APPP05067 AC139792.2-201ENST00000624218 587 ntBASIC6.57□□□□□ -1.36
APPP05067 AC000095.2-202ENST00000637415 154 ntBASIC6.57□□□□□ -1.36
APPP05067 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.57□□□□□ -1.36
APPP05067 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
APPP05067 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
APPP05067 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
APPP05067 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
APPP05067 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
APPP05067 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC6.56□□□□□ -1.36
APPP05067 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
APPP05067 CYP4Z2P-201ENST00000423332 1512 ntBASIC6.56□□□□□ -1.36
APPP05067 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC6.56□□□□□ -1.36
APPP05067 RNA5SP27-201ENST00000363839 119 ntBASIC6.56□□□□□ -1.36
APPP05067 Y_RNA.318-201ENST00000365131 97 ntBASIC6.56□□□□□ -1.36
APPP05067 SNORD116.1-201ENST00000365628 92 ntBASIC6.56□□□□□ -1.36
APPP05067 AC119751.3-201ENST00000399720 670 ntBASIC6.56□□□□□ -1.36
APPP05067 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC6.56□□□□□ -1.36
APPP05067 AL391361.1-201ENST00000405580 489 ntBASIC6.56□□□□□ -1.36
APPP05067 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.56□□□□□ -1.36
APPP05067 RPS7P9-201ENST00000414704 586 ntBASIC6.56□□□□□ -1.36
APPP05067 AC093084.1-201ENST00000424233 687 ntBASIC6.56□□□□□ -1.36
APPP05067 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
APPP05067 AC084290.1-201ENST00000434995 374 ntBASIC6.56□□□□□ -1.36
APPP05067 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC6.56□□□□□ -1.36
APPP05067 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC6.56□□□□□ -1.36
APPP05067 KRTAP8-2P-201ENST00000440620 186 ntBASIC6.56□□□□□ -1.36
APPP05067 AC092685.1-201ENST00000447960 1243 ntBASIC6.56□□□□□ -1.36
APPP05067 CALM1P2-201ENST00000452941 448 ntBASIC6.56□□□□□ -1.36
APPP05067 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC6.56□□□□□ -1.36
APPP05067 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC6.56□□□□□ -1.36
APPP05067 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC6.56□□□□□ -1.36
APPP05067 MTHFD2P4-201ENST00000515074 1025 ntBASIC6.56□□□□□ -1.36
APPP05067 RN7SKP34-201ENST00000516142 244 ntBASIC6.56□□□□□ -1.36
APPP05067 SCARNA16.4-201ENST00000516956 187 ntBASIC6.56□□□□□ -1.36
APPP05067 IGKV2-18-201ENST00000522607 343 ntBASIC6.56□□□□□ -1.36
APPP05067 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC6.56□□□□□ -1.36
APPP05067 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC6.56□□□□□ -1.36
APPP05067 OR5AK3P-201ENST00000527486 1297 ntBASIC6.56□□□□□ -1.36
APPP05067 AL356057.1-201ENST00000533798 831 ntBASIC6.56□□□□□ -1.36
APPP05067 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
APPP05067 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC6.56□□□□□ -1.36
APPP05067 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC6.56□□□□□ -1.36
APPP05067 AC018618.2-201ENST00000604770 446 ntBASIC6.56□□□□□ -1.36
APPP05067 AL133507.1-201ENST00000605269 557 ntBASIC6.56□□□□□ -1.36
APPP05067 AC000068.2-201ENST00000608816 460 ntBASIC6.56□□□□□ -1.36
APPP05067 AC109309.2-201ENST00000612597 332 ntBASIC6.56□□□□□ -1.36
APPP05067 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC6.56□□□□□ -1.36
APPP05067 LGI1-209ENST00000627699 664 ntTSL 3 BASIC6.56□□□□□ -1.36
APPP05067 GMFB-210ENST00000628554 639 ntTSL 4 BASIC6.56□□□□□ -1.36
APPP05067 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC6.56□□□□□ -1.36
APPP05067 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
APPP05067 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms