Protein–RNA interactions for Protein: O43300

LRRTM2, Leucine-rich repeat transmembrane neuronal protein 2, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM2O43300 RNU6-564P-201ENST00000410983 104 ntBASIC4.67□□□□□ -1.66
LRRTM2O43300 RPL6P29-201ENST00000414863 865 ntBASIC4.67□□□□□ -1.66
LRRTM2O43300 DDX39BP1-205ENST00000422507 192 ntBASIC4.67□□□□□ -1.66
LRRTM2O43300 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.67□□□□□ -1.66
LRRTM2O43300 AC092447.2-201ENST00000435487 669 ntBASIC4.67□□□□□ -1.66
LRRTM2O43300 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.67□□□□□ -1.66
LRRTM2O43300 CACYBPP1-201ENST00000438592 684 ntBASIC4.67□□□□□ -1.66
LRRTM2O43300 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.67□□□□□ -1.66
LRRTM2O43300 CALM1P2-201ENST00000452941 448 ntBASIC4.67□□□□□ -1.66
LRRTM2O43300 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC4.67□□□□□ -1.66
LRRTM2O43300 RPL31P53-201ENST00000457065 348 ntBASIC4.67□□□□□ -1.66
LRRTM2O43300 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.67□□□□□ -1.66
LRRTM2O43300 AC068587.1-201ENST00000483613 781 ntBASIC4.67□□□□□ -1.66
LRRTM2O43300 RN7SL244P-201ENST00000493405 297 ntBASIC4.67□□□□□ -1.66
LRRTM2O43300 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LRRTM2O43300 BTF3P13-201ENST00000513224 490 ntBASIC4.67□□□□□ -1.66
LRRTM2O43300 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC4.67□□□□□ -1.66
LRRTM2O43300 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LRRTM2O43300 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.67□□□□□ -1.66
LRRTM2O43300 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LRRTM2O43300 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.67□□□□□ -1.66
LRRTM2O43300 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.67□□□□□ -1.66
LRRTM2O43300 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.67□□□□□ -1.66
LRRTM2O43300 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC4.67□□□□□ -1.66
LRRTM2O43300 AC209154.1-201ENST00000582156 337 ntBASIC4.67□□□□□ -1.66
LRRTM2O43300 MIR4691-201ENST00000583764 85 ntBASIC4.67□□□□□ -1.66
LRRTM2O43300 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.67□□□□□ -1.66
LRRTM2O43300 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.67□□□□□ -1.66
LRRTM2O43300 AC123786.2-201ENST00000603459 275 ntBASIC4.67□□□□□ -1.66
LRRTM2O43300 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.67□□□□□ -1.66
LRRTM2O43300 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.67□□□□□ -1.66
LRRTM2O43300 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.67□□□□□ -1.66
LRRTM2O43300 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.67□□□□□ -1.66
LRRTM2O43300 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.67□□□□□ -1.66
LRRTM2O43300 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LRRTM2O43300 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LRRTM2O43300 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.66□□□□□ -1.66
LRRTM2O43300 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LRRTM2O43300 AL451142.2-201ENST00000429076 2090 ntBASIC4.66□□□□□ -1.66
LRRTM2O43300 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LRRTM2O43300 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LRRTM2O43300 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.66□□□□□ -1.66
LRRTM2O43300 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
LRRTM2O43300 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
LRRTM2O43300 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
LRRTM2O43300 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
LRRTM2O43300 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
LRRTM2O43300 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.66□□□□□ -1.66
LRRTM2O43300 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
LRRTM2O43300 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LRRTM2O43300 AC019155.1-201ENST00000382242 574 ntBASIC4.66□□□□□ -1.66
LRRTM2O43300 AL136116.2-201ENST00000404020 785 ntBASIC4.66□□□□□ -1.66
LRRTM2O43300 MTND3P20-201ENST00000407663 186 ntBASIC4.66□□□□□ -1.66
LRRTM2O43300 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.66□□□□□ -1.66
LRRTM2O43300 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.66□□□□□ -1.66
LRRTM2O43300 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.66□□□□□ -1.66
LRRTM2O43300 FAM204CP-201ENST00000424489 642 ntBASIC4.66□□□□□ -1.66
LRRTM2O43300 AC068287.1-201ENST00000430283 295 ntBASIC4.66□□□□□ -1.66
LRRTM2O43300 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.66□□□□□ -1.66
LRRTM2O43300 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.66□□□□□ -1.66
LRRTM2O43300 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.66□□□□□ -1.66
LRRTM2O43300 HMGB3P9-201ENST00000441799 583 ntBASIC4.66□□□□□ -1.66
LRRTM2O43300 AL031584.1-201ENST00000447169 754 ntBASIC4.66□□□□□ -1.66
LRRTM2O43300 CCRL1P1-201ENST00000449542 1053 ntBASIC4.66□□□□□ -1.66
LRRTM2O43300 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.66□□□□□ -1.66
LRRTM2O43300 NIP7P2-201ENST00000485801 544 ntBASIC4.66□□□□□ -1.66
LRRTM2O43300 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.66□□□□□ -1.66
LRRTM2O43300 RPL23AP72-201ENST00000492447 435 ntBASIC4.66□□□□□ -1.66
LRRTM2O43300 AC140172.1-201ENST00000502928 141 ntBASIC4.66□□□□□ -1.66
LRRTM2O43300 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.66□□□□□ -1.66
LRRTM2O43300 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.66□□□□□ -1.66
LRRTM2O43300 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.66□□□□□ -1.66
LRRTM2O43300 IGHV3-63-201ENST00000518422 341 ntBASIC4.66□□□□□ -1.66
LRRTM2O43300 MTND2P7-201ENST00000521337 640 ntBASIC4.66□□□□□ -1.66
LRRTM2O43300 C1GALT1P3-201ENST00000522049 819 ntBASIC4.66□□□□□ -1.66
LRRTM2O43300 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC4.66□□□□□ -1.66
LRRTM2O43300 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.66□□□□□ -1.66
LRRTM2O43300 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.66□□□□□ -1.66
LRRTM2O43300 AC009268.1-201ENST00000561352 1203 ntBASIC4.66□□□□□ -1.66
LRRTM2O43300 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.66□□□□□ -1.66
LRRTM2O43300 RN7SL356P-201ENST00000582228 248 ntBASIC4.66□□□□□ -1.66
LRRTM2O43300 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.66□□□□□ -1.66
LRRTM2O43300 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LRRTM2O43300 AC084373.1-201ENST00000603311 235 ntBASIC4.66□□□□□ -1.66
LRRTM2O43300 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.66□□□□□ -1.66
LRRTM2O43300 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
LRRTM2O43300 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC4.66□□□□□ -1.66
LRRTM2O43300 AC135068.12-201ENST00000637370 931 ntBASIC4.66□□□□□ -1.66
LRRTM2O43300 CNOT6LP1-201ENST00000559681 1462 ntBASIC4.66□□□□□ -1.66
LRRTM2O43300 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
LRRTM2O43300 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
LRRTM2O43300 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.66□□□□□ -1.66
LRRTM2O43300 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.65□□□□□ -1.66
LRRTM2O43300 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
LRRTM2O43300 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
LRRTM2O43300 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.65□□□□□ -1.66
LRRTM2O43300 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.65□□□□□ -1.66
LRRTM2O43300 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.65□□□□□ -1.66
LRRTM2O43300 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
LRRTM2O43300 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.65□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms