Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC4.61□□□□□ -1.67
RNF6Q9Y252 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.61□□□□□ -1.67
RNF6Q9Y252 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RNF6Q9Y252 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC4.61□□□□□ -1.67
RNF6Q9Y252 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC4.61□□□□□ -1.67
RNF6Q9Y252 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.61□□□□□ -1.67
RNF6Q9Y252 AL512310.9-201ENST00000553311 948 ntBASIC4.61□□□□□ -1.67
RNF6Q9Y252 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.61□□□□□ -1.67
RNF6Q9Y252 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.61□□□□□ -1.67
RNF6Q9Y252 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.61□□□□□ -1.67
RNF6Q9Y252 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RNF6Q9Y252 MIR4691-201ENST00000583764 85 ntBASIC4.61□□□□□ -1.67
RNF6Q9Y252 AC084373.1-201ENST00000603311 235 ntBASIC4.61□□□□□ -1.67
RNF6Q9Y252 AL133406.3-201ENST00000606817 541 ntBASIC4.61□□□□□ -1.67
RNF6Q9Y252 AL353600.1-201ENST00000608148 251 ntBASIC4.61□□□□□ -1.67
RNF6Q9Y252 AC119674.1-220ENST00000641502 1048 ntBASIC4.61□□□□□ -1.67
RNF6Q9Y252 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
RNF6Q9Y252 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
RNF6Q9Y252 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.61□□□□□ -1.67
RNF6Q9Y252 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.61□□□□□ -1.67
RNF6Q9Y252 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.61□□□□□ -1.67
RNF6Q9Y252 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.61□□□□□ -1.67
RNF6Q9Y252 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.61□□□□□ -1.67
RNF6Q9Y252 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.6□□□□□ -1.67
RNF6Q9Y252 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
RNF6Q9Y252 MAPK10-320ENST00000641462 6696 ntBASIC4.6□□□□□ -1.67
RNF6Q9Y252 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.6□□□□□ -1.67
RNF6Q9Y252 DDX18P4-201ENST00000511690 1966 ntBASIC4.6□□□□□ -1.67
RNF6Q9Y252 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
RNF6Q9Y252 IRF5P1-201ENST00000504852 2164 ntBASIC4.6□□□□□ -1.67
RNF6Q9Y252 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.6□□□□□ -1.67
RNF6Q9Y252 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
RNF6Q9Y252 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RNF6Q9Y252 RN7SKP95-201ENST00000362860 303 ntBASIC4.6□□□□□ -1.67
RNF6Q9Y252 MIR421-201ENST00000365696 85 ntBASIC4.6□□□□□ -1.67
RNF6Q9Y252 AL592291.1-201ENST00000403830 352 ntBASIC4.6□□□□□ -1.67
RNF6Q9Y252 AP000580.1-201ENST00000404439 358 ntBASIC4.6□□□□□ -1.67
RNF6Q9Y252 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RNF6Q9Y252 AL590806.1-201ENST00000415818 853 ntBASIC4.6□□□□□ -1.67
RNF6Q9Y252 QRSL1P2-201ENST00000418582 964 ntBASIC4.6□□□□□ -1.67
RNF6Q9Y252 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.6□□□□□ -1.67
RNF6Q9Y252 AL356806.1-201ENST00000422524 916 ntBASIC4.6□□□□□ -1.67
RNF6Q9Y252 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RNF6Q9Y252 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.6□□□□□ -1.67
RNF6Q9Y252 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.6□□□□□ -1.67
RNF6Q9Y252 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.6□□□□□ -1.67
RNF6Q9Y252 NDUFA5P1-201ENST00000433858 341 ntBASIC4.6□□□□□ -1.67
RNF6Q9Y252 AC008072.1-201ENST00000434254 824 ntBASIC4.6□□□□□ -1.67
RNF6Q9Y252 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.6□□□□□ -1.67
RNF6Q9Y252 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.6□□□□□ -1.67
RNF6Q9Y252 PRPF38AP2-201ENST00000438179 851 ntBASIC4.6□□□□□ -1.67
RNF6Q9Y252 ELOCP3-201ENST00000439303 348 ntBASIC4.6□□□□□ -1.67
RNF6Q9Y252 TXNP5-201ENST00000441043 315 ntBASIC4.6□□□□□ -1.67
RNF6Q9Y252 TPT1P13-201ENST00000449760 499 ntBASIC4.6□□□□□ -1.67
RNF6Q9Y252 RN7SL738P-201ENST00000470264 297 ntBASIC4.6□□□□□ -1.67
RNF6Q9Y252 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RNF6Q9Y252 OR51K1P-201ENST00000510214 950 ntBASIC4.6□□□□□ -1.67
RNF6Q9Y252 TCP11X3P-202ENST00000514289 1254 ntBASIC4.6□□□□□ -1.67
RNF6Q9Y252 HMGB1P19-201ENST00000517578 577 ntBASIC4.6□□□□□ -1.67
RNF6Q9Y252 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.6□□□□□ -1.67
RNF6Q9Y252 AC008033.2-201ENST00000542626 177 ntBASIC4.6□□□□□ -1.67
RNF6Q9Y252 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.6□□□□□ -1.67
RNF6Q9Y252 GSTP1P1-201ENST00000548078 319 ntBASIC4.6□□□□□ -1.67
RNF6Q9Y252 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.6□□□□□ -1.67
RNF6Q9Y252 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RNF6Q9Y252 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.6□□□□□ -1.67
RNF6Q9Y252 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.6□□□□□ -1.67
RNF6Q9Y252 AC067805.1-201ENST00000559344 470 ntBASIC4.6□□□□□ -1.67
RNF6Q9Y252 AC079075.1-201ENST00000559543 878 ntBASIC4.6□□□□□ -1.67
RNF6Q9Y252 RN7SL52P-201ENST00000584271 284 ntBASIC4.6□□□□□ -1.67
RNF6Q9Y252 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.6□□□□□ -1.67
RNF6Q9Y252 IMMP1LP1-201ENST00000605170 488 ntBASIC4.6□□□□□ -1.67
RNF6Q9Y252 uc_338.18-201ENST00000615451 175 ntBASIC4.6□□□□□ -1.67
RNF6Q9Y252 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC4.6□□□□□ -1.67
RNF6Q9Y252 AC010435.1-201ENST00000623353 1177 ntBASIC4.6□□□□□ -1.67
RNF6Q9Y252 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RNF6Q9Y252 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RNF6Q9Y252 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.6□□□□□ -1.67
RNF6Q9Y252 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RNF6Q9Y252 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RNF6Q9Y252 VPS35P1-201ENST00000563400 1518 ntBASIC4.6□□□□□ -1.67
RNF6Q9Y252 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.6□□□□□ -1.67
RNF6Q9Y252 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.6□□□□□ -1.67
RNF6Q9Y252 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RNF6Q9Y252 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
RNF6Q9Y252 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RNF6Q9Y252 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
RNF6Q9Y252 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RNF6Q9Y252 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RNF6Q9Y252 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.59□□□□□ -1.67
RNF6Q9Y252 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RNF6Q9Y252 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RNF6Q9Y252 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RNF6Q9Y252 RNA5SP87-201ENST00000384155 118 ntBASIC4.59□□□□□ -1.67
RNF6Q9Y252 MIR141-201ENST00000384975 95 ntBASIC4.59□□□□□ -1.67
RNF6Q9Y252 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
RNF6Q9Y252 AL034370.1-201ENST00000397254 1590 ntBASIC4.59□□□□□ -1.67
RNF6Q9Y252 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.59□□□□□ -1.67
RNF6Q9Y252 CHEK2P3-201ENST00000416118 248 ntBASIC4.59□□□□□ -1.67
RNF6Q9Y252 E2F6P2-201ENST00000420708 748 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms