Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 AL592436.1-201ENST00000605135 558 ntBASIC1.82□□□□□ -2.12
MACF1Q9UPN3 SVEP1-203ENST00000401783 12350 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 AL031595.3-201ENST00000624919 14262 ntBASIC1.82□□□□□ -2.12
MACF1Q9UPN3 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 DNAH9-203ENST00000454412 13452 ntTSL 5 BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 KIAA1143-201ENST00000296121 5122 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 MAP4K4-206ENST00000413150 6958 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 SNORA60-201ENST00000362396 134 ntBASIC1.82□□□□□ -2.12
MACF1Q9UPN3 LINC00993-201ENST00000420453 540 ntBASIC1.82□□□□□ -2.12
MACF1Q9UPN3 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 ZKSCAN7P1-201ENST00000543668 673 ntBASIC1.82□□□□□ -2.12
MACF1Q9UPN3 AC113403.1-201ENST00000604910 193 ntBASIC1.82□□□□□ -2.12
MACF1Q9UPN3 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 PSD3-203ENST00000428502 6330 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 ADAM22-205ENST00000398209 9144 ntAPPRIS P4 TSL 1 (best) BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 WNT2B-203ENST00000369686 10879 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 CCDC88A-202ENST00000336838 9505 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 NFASC-225ENST00000539706 10135 ntAPPRIS ALT1 TSL 5 BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 CLASP1-202ENST00000397587 7915 ntTSL 5 BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 CYB5R4-202ENST00000369681 9252 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 AL512634.1-201ENST00000566873 2432 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 RNU6ATAC5P-201ENST00000388104 126 ntBASIC1.82□□□□□ -2.12
MACF1Q9UPN3 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 RNU6ATAC28P-201ENST00000459249 118 ntBASIC1.82□□□□□ -2.12
MACF1Q9UPN3 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 RN7SL622P-201ENST00000585292 275 ntBASIC1.82□□□□□ -2.12
MACF1Q9UPN3 AC016957.2-201ENST00000616998 848 ntBASIC1.82□□□□□ -2.12
MACF1Q9UPN3 ADGRB3-202ENST00000370598 6010 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 FAM135B-204ENST00000395297 6962 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 ALB-220ENST00000621628 1606 ntTSL 5 BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 AL353763.2-201ENST00000623489 1903 ntBASIC1.82□□□□□ -2.12
MACF1Q9UPN3 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 VWC2-201ENST00000340652 11299 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 SNORA70.10-201ENST00000384515 134 ntBASIC1.82□□□□□ -2.12
MACF1Q9UPN3 MIR1251-201ENST00000408552 70 ntBASIC1.82□□□□□ -2.12
MACF1Q9UPN3 AC012158.1-204ENST00000483430 465 ntBASIC1.82□□□□□ -2.12
MACF1Q9UPN3 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
MACF1Q9UPN3 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
MACF1Q9UPN3 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC1.81□□□□□ -2.12
MACF1Q9UPN3 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC1.81□□□□□ -2.12
MACF1Q9UPN3 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC1.81□□□□□ -2.12
MACF1Q9UPN3 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
MACF1Q9UPN3 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
MACF1Q9UPN3 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC1.81□□□□□ -2.12
MACF1Q9UPN3 AC103783.1-201ENST00000520506 373 ntBASIC1.81□□□□□ -2.12
MACF1Q9UPN3 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC1.81□□□□□ -2.12
MACF1Q9UPN3 AC093249.4-201ENST00000564755 259 ntBASIC1.81□□□□□ -2.12
MACF1Q9UPN3 MIR8069-1-201ENST00000616627 86 ntBASIC1.81□□□□□ -2.12
MACF1Q9UPN3 MIR8069-2-201ENST00000621412 86 ntBASIC1.81□□□□□ -2.12
MACF1Q9UPN3 AC010608.2-201ENST00000624830 470 ntBASIC1.81□□□□□ -2.12
MACF1Q9UPN3 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
MACF1Q9UPN3 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC1.81□□□□□ -2.12
MACF1Q9UPN3 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
MACF1Q9UPN3 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
MACF1Q9UPN3 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
MACF1Q9UPN3 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC1.81□□□□□ -2.12
MACF1Q9UPN3 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
MACF1Q9UPN3 RNU1-33P-201ENST00000364249 162 ntBASIC1.81□□□□□ -2.12
MACF1Q9UPN3 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.81□□□□□ -2.12
MACF1Q9UPN3 AL513124.1-201ENST00000450410 614 ntBASIC1.81□□□□□ -2.12
MACF1Q9UPN3 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC1.81□□□□□ -2.12
MACF1Q9UPN3 AP000563.1-201ENST00000490865 758 ntBASIC1.81□□□□□ -2.12
MACF1Q9UPN3 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC1.81□□□□□ -2.12
MACF1Q9UPN3 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.81□□□□□ -2.12
MACF1Q9UPN3 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC1.81□□□□□ -2.12
MACF1Q9UPN3 AC012493.2-201ENST00000595083 291 ntBASIC1.81□□□□□ -2.12
MACF1Q9UPN3 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC1.81□□□□□ -2.12
MACF1Q9UPN3 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
MACF1Q9UPN3 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
MACF1Q9UPN3 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC1.81□□□□□ -2.12
MACF1Q9UPN3 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
MACF1Q9UPN3 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
MACF1Q9UPN3 RNU6-213P-201ENST00000384051 104 ntBASIC1.81□□□□□ -2.12
MACF1Q9UPN3 AL035423.1-201ENST00000420331 213 ntBASIC1.81□□□□□ -2.12
MACF1Q9UPN3 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC1.81□□□□□ -2.12
MACF1Q9UPN3 RSL24D1P3-201ENST00000449255 495 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms