Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 GTF2IP22-201ENST00000554443 182 ntBASIC3.71□□□□□ -1.82
CSMD1Q96PZ7 MIR5685-201ENST00000579080 79 ntBASIC3.71□□□□□ -1.82
CSMD1Q96PZ7 MIR7853-201ENST00000584820 132 ntBASIC3.71□□□□□ -1.82
CSMD1Q96PZ7 AC011816.2-201ENST00000607089 556 ntBASIC3.71□□□□□ -1.82
CSMD1Q96PZ7 CCAT2-201ENST00000630920 1752 ntBASIC3.71□□□□□ -1.82
CSMD1Q96PZ7 ARNTL2-207ENST00000542388 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
CSMD1Q96PZ7 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC3.71□□□□□ -1.82
CSMD1Q96PZ7 SNORA70.6-201ENST00000383934 134 ntBASIC3.71□□□□□ -1.82
CSMD1Q96PZ7 OR6C71P-201ENST00000432580 913 ntBASIC3.71□□□□□ -1.82
CSMD1Q96PZ7 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.71□□□□□ -1.82
CSMD1Q96PZ7 RPL37P3-201ENST00000456825 293 ntBASIC3.71□□□□□ -1.82
CSMD1Q96PZ7 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.71□□□□□ -1.82
CSMD1Q96PZ7 IFITM8P-201ENST00000522529 394 ntBASIC3.71□□□□□ -1.82
CSMD1Q96PZ7 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.71□□□□□ -1.82
CSMD1Q96PZ7 MIR4513-201ENST00000581077 86 ntBASIC3.71□□□□□ -1.82
CSMD1Q96PZ7 AC107294.1-201ENST00000609524 467 ntBASIC3.71□□□□□ -1.82
CSMD1Q96PZ7 uc_338.13-201ENST00000618243 179 ntBASIC3.71□□□□□ -1.82
CSMD1Q96PZ7 MIR6852-201ENST00000621699 66 ntBASIC3.71□□□□□ -1.82
CSMD1Q96PZ7 AP001002.2-201ENST00000625137 386 ntBASIC3.71□□□□□ -1.82
CSMD1Q96PZ7 AC006453.5-201ENST00000636451 619 ntBASIC3.71□□□□□ -1.82
CSMD1Q96PZ7 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CSMD1Q96PZ7 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
CSMD1Q96PZ7 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CSMD1Q96PZ7 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.82
CSMD1Q96PZ7 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CSMD1Q96PZ7 AC012213.2-201ENST00000562917 4597 ntBASIC3.71□□□□□ -1.82
CSMD1Q96PZ7 TRIM51GP-201ENST00000534741 1350 ntBASIC3.71□□□□□ -1.82
CSMD1Q96PZ7 TSC1-208ENST00000545250 8310 ntTSL 5 BASIC3.71□□□□□ -1.82
CSMD1Q96PZ7 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CSMD1Q96PZ7 ALMS1-204ENST00000484298 12595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
CSMD1Q96PZ7 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CSMD1Q96PZ7 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
CSMD1Q96PZ7 COX5BP7-201ENST00000414780 274 ntBASIC3.71□□□□□ -1.82
CSMD1Q96PZ7 MFSD13B-201ENST00000420133 1290 ntBASIC3.71□□□□□ -1.82
CSMD1Q96PZ7 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.71□□□□□ -1.82
CSMD1Q96PZ7 AL133244.1-201ENST00000456007 258 ntBASIC3.71□□□□□ -1.82
CSMD1Q96PZ7 ACTR3P3-201ENST00000480448 893 ntBASIC3.71□□□□□ -1.82
CSMD1Q96PZ7 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC3.71□□□□□ -1.82
CSMD1Q96PZ7 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC3.71□□□□□ -1.82
CSMD1Q96PZ7 AC092354.2-201ENST00000607786 514 ntBASIC3.71□□□□□ -1.82
CSMD1Q96PZ7 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC3.71□□□□□ -1.82
CSMD1Q96PZ7 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
CSMD1Q96PZ7 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC3.71□□□□□ -1.82
CSMD1Q96PZ7 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CSMD1Q96PZ7 SOX6-202ENST00000396356 8865 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
CSMD1Q96PZ7 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
CSMD1Q96PZ7 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CSMD1Q96PZ7 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
CSMD1Q96PZ7 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CSMD1Q96PZ7 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CSMD1Q96PZ7 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CSMD1Q96PZ7 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CSMD1Q96PZ7 CPHL1P-201ENST00000461341 3407 ntBASIC3.7□□□□□ -1.82
CSMD1Q96PZ7 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
CSMD1Q96PZ7 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CSMD1Q96PZ7 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CSMD1Q96PZ7 MIR490-201ENST00000384865 128 ntBASIC3.7□□□□□ -1.82
CSMD1Q96PZ7 SNORA48.2-201ENST00000390926 124 ntBASIC3.7□□□□□ -1.82
CSMD1Q96PZ7 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CSMD1Q96PZ7 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
CSMD1Q96PZ7 RNA5SP36-201ENST00000410197 133 ntBASIC3.7□□□□□ -1.82
CSMD1Q96PZ7 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC3.7□□□□□ -1.82
CSMD1Q96PZ7 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC3.7□□□□□ -1.82
CSMD1Q96PZ7 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC3.7□□□□□ -1.82
CSMD1Q96PZ7 PSAT1P4-201ENST00000466500 526 ntBASIC3.7□□□□□ -1.82
CSMD1Q96PZ7 RPL6P9-201ENST00000466502 859 ntBASIC3.7□□□□□ -1.82
CSMD1Q96PZ7 AL049873.1-201ENST00000480540 376 ntBASIC3.7□□□□□ -1.82
CSMD1Q96PZ7 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CSMD1Q96PZ7 KCTD9P2-201ENST00000512203 1013 ntBASIC3.7□□□□□ -1.82
CSMD1Q96PZ7 RNA5SP519-201ENST00000516480 119 ntBASIC3.7□□□□□ -1.82
CSMD1Q96PZ7 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CSMD1Q96PZ7 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC3.7□□□□□ -1.82
CSMD1Q96PZ7 PRPF19P1-201ENST00000584766 898 ntBASIC3.7□□□□□ -1.82
CSMD1Q96PZ7 AC115621.1-201ENST00000604653 858 ntBASIC3.7□□□□□ -1.82
CSMD1Q96PZ7 AL034408.1-201ENST00000637712 664 ntBASIC3.7□□□□□ -1.82
CSMD1Q96PZ7 TRIM66-202ENST00000402157 10086 ntAPPRIS P5 TSL 5 BASIC3.7□□□□□ -1.82
CSMD1Q96PZ7 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC3.7□□□□□ -1.82
CSMD1Q96PZ7 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.7□□□□□ -1.82
CSMD1Q96PZ7 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CSMD1Q96PZ7 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
CSMD1Q96PZ7 AC007382.1-201ENST00000624376 2618 ntBASIC3.7□□□□□ -1.82
CSMD1Q96PZ7 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CSMD1Q96PZ7 AC090018.1-201ENST00000434369 367 ntBASIC3.7□□□□□ -1.82
CSMD1Q96PZ7 AC006994.1-201ENST00000438212 839 ntBASIC3.7□□□□□ -1.82
CSMD1Q96PZ7 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC3.7□□□□□ -1.82
CSMD1Q96PZ7 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC3.7□□□□□ -1.82
CSMD1Q96PZ7 AL049830.4-201ENST00000555149 351 ntBASIC3.7□□□□□ -1.82
CSMD1Q96PZ7 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
CSMD1Q96PZ7 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CSMD1Q96PZ7 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CSMD1Q96PZ7 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC3.7□□□□□ -1.82
CSMD1Q96PZ7 RAPGEF5-202ENST00000401957 6159 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CSMD1Q96PZ7 RNU1-83P-201ENST00000363426 164 ntBASIC3.69□□□□□ -1.82
CSMD1Q96PZ7 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.69□□□□□ -1.82
CSMD1Q96PZ7 AC104763.1-201ENST00000475274 360 ntBASIC3.69□□□□□ -1.82
CSMD1Q96PZ7 GAPDHP36-201ENST00000480688 918 ntBASIC3.69□□□□□ -1.82
CSMD1Q96PZ7 RN7SL323P-201ENST00000494712 295 ntBASIC3.69□□□□□ -1.82
CSMD1Q96PZ7 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.69□□□□□ -1.82
CSMD1Q96PZ7 AC005255.1-201ENST00000593748 216 ntBASIC3.69□□□□□ -1.82
CSMD1Q96PZ7 OR7A19P-201ENST00000608051 733 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms