Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AC092709.1-201ENST00000521355 1045 ntBASIC3.07□□□□□ -1.92
ALMS1Q8TCU4 AC022106.2-201ENST00000620114 757 ntBASIC3.07□□□□□ -1.92
ALMS1Q8TCU4 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC3.07□□□□□ -1.92
ALMS1Q8TCU4 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC3.07□□□□□ -1.92
ALMS1Q8TCU4 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
ALMS1Q8TCU4 PHACTR2P1-201ENST00000605639 1414 ntBASIC3.07□□□□□ -1.92
ALMS1Q8TCU4 AC011755.1-201ENST00000623763 2049 ntBASIC3.07□□□□□ -1.92
ALMS1Q8TCU4 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
ALMS1Q8TCU4 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC3.07□□□□□ -1.92
ALMS1Q8TCU4 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC3.07□□□□□ -1.92
ALMS1Q8TCU4 RPL21P89-201ENST00000444021 467 ntBASIC3.07□□□□□ -1.92
ALMS1Q8TCU4 AC023136.1-201ENST00000513093 1105 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
ALMS1Q8TCU4 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.07□□□□□ -1.92
ALMS1Q8TCU4 FKBP1BP1-201ENST00000553366 325 ntBASIC3.07□□□□□ -1.92
ALMS1Q8TCU4 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.07□□□□□ -1.92
ALMS1Q8TCU4 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC3.07□□□□□ -1.92
ALMS1Q8TCU4 AF131215.7-201ENST00000602443 707 ntBASIC3.07□□□□□ -1.92
ALMS1Q8TCU4 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.07□□□□□ -1.92
ALMS1Q8TCU4 OR7A19P-201ENST00000608051 733 ntBASIC3.07□□□□□ -1.92
ALMS1Q8TCU4 MIR7151-201ENST00000617477 60 ntBASIC3.07□□□□□ -1.92
ALMS1Q8TCU4 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC3.07□□□□□ -1.92
ALMS1Q8TCU4 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.07□□□□□ -1.92
ALMS1Q8TCU4 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC3.07□□□□□ -1.92
ALMS1Q8TCU4 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
ALMS1Q8TCU4 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC3.07□□□□□ -1.92
ALMS1Q8TCU4 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC3.07□□□□□ -1.92
ALMS1Q8TCU4 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
ALMS1Q8TCU4 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC3.07□□□□□ -1.92
ALMS1Q8TCU4 AL158163.1-201ENST00000603915 1649 ntBASIC3.07□□□□□ -1.92
ALMS1Q8TCU4 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.07□□□□□ -1.92
ALMS1Q8TCU4 RNA5SP119-201ENST00000362715 117 ntBASIC3.07□□□□□ -1.92
ALMS1Q8TCU4 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.07□□□□□ -1.92
ALMS1Q8TCU4 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC3.07□□□□□ -1.92
ALMS1Q8TCU4 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC3.07□□□□□ -1.92
ALMS1Q8TCU4 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.07□□□□□ -1.92
ALMS1Q8TCU4 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.07□□□□□ -1.92
ALMS1Q8TCU4 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.07□□□□□ -1.92
ALMS1Q8TCU4 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.07□□□□□ -1.92
ALMS1Q8TCU4 AC091979.2-201ENST00000607514 214 ntBASIC3.07□□□□□ -1.92
ALMS1Q8TCU4 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC3.07□□□□□ -1.92
ALMS1Q8TCU4 AL672167.1-204ENST00000641875 3017 ntBASIC3.07□□□□□ -1.92
ALMS1Q8TCU4 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
ALMS1Q8TCU4 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC3.07□□□□□ -1.92
ALMS1Q8TCU4 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
ALMS1Q8TCU4 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 AC092681.1-201ENST00000297369 291 ntBASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 AL132838.2-201ENST00000492041 314 ntBASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 AP003730.1-201ENST00000524605 285 ntBASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 AC106782.4-201ENST00000568264 210 ntBASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 AP001273.1-201ENST00000624493 3152 ntBASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 AL603750.1-201ENST00000624216 1717 ntBASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 AC007068.1-201ENST00000396690 844 ntBASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 MRPL50P1-201ENST00000431951 384 ntBASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 AC079804.1-201ENST00000461922 436 ntBASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 AC104763.1-201ENST00000475274 360 ntBASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 AP000619.3-201ENST00000535634 1127 ntBASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 PRPF19P1-201ENST00000584766 898 ntBASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 IPO5P1-202ENST00000600039 287 ntBASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 AC007546.1-201ENST00000619452 559 ntBASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 OFD1P9Y-201ENST00000417699 1491 ntBASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 RLIMP1-201ENST00000339626 1680 ntBASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 AL121950.1-201ENST00000624993 2077 ntBASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 USP45-204ENST00000369233 2514 ntTSL 5 BASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 AC008033.1-201ENST00000216407 1162 ntBASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 RNA5SP241-201ENST00000391326 114 ntBASIC3.06□□□□□ -1.92
ALMS1Q8TCU4 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms