Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 HMGB1P40-201ENST00000525121 540 ntBASIC6.35□□□□□ -1.39
OTOP1Q7RTM1 MTND2P26-201ENST00000528255 1029 ntBASIC6.35□□□□□ -1.39
OTOP1Q7RTM1 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC6.35□□□□□ -1.39
OTOP1Q7RTM1 AC137627.1-201ENST00000545761 289 ntBASIC6.35□□□□□ -1.39
OTOP1Q7RTM1 AC127381.1-201ENST00000555979 939 ntBASIC6.35□□□□□ -1.39
OTOP1Q7RTM1 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC6.35□□□□□ -1.39
OTOP1Q7RTM1 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC6.35□□□□□ -1.39
OTOP1Q7RTM1 AL354943.1-201ENST00000572103 781 ntBASIC6.35□□□□□ -1.39
OTOP1Q7RTM1 AC209154.1-201ENST00000582156 337 ntBASIC6.35□□□□□ -1.39
OTOP1Q7RTM1 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC6.35□□□□□ -1.39
OTOP1Q7RTM1 AC060780.2-201ENST00000589047 198 ntBASIC6.35□□□□□ -1.39
OTOP1Q7RTM1 AC095055.1-201ENST00000603472 1113 ntBASIC6.35□□□□□ -1.39
OTOP1Q7RTM1 AC013468.1-201ENST00000608680 598 ntBASIC6.35□□□□□ -1.39
OTOP1Q7RTM1 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC6.35□□□□□ -1.39
OTOP1Q7RTM1 AC009237.15-201ENST00000610252 501 ntBASIC6.35□□□□□ -1.39
OTOP1Q7RTM1 AC025574.2-201ENST00000615621 514 ntBASIC6.35□□□□□ -1.39
OTOP1Q7RTM1 AL162574.1-201ENST00000615702 950 ntBASIC6.35□□□□□ -1.39
OTOP1Q7RTM1 AC109583.2-201ENST00000617367 129 ntBASIC6.35□□□□□ -1.39
OTOP1Q7RTM1 AC090527.3-201ENST00000619041 548 ntBASIC6.35□□□□□ -1.39
OTOP1Q7RTM1 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
OTOP1Q7RTM1 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC6.35□□□□□ -1.39
OTOP1Q7RTM1 MIR1322-201ENST00000638013 71 ntBASIC6.35□□□□□ -1.39
OTOP1Q7RTM1 ZNF663P-202ENST00000641770 1131 ntBASIC6.35□□□□□ -1.39
OTOP1Q7RTM1 LINC02211-204ENST00000642024 1070 ntBASIC6.35□□□□□ -1.39
OTOP1Q7RTM1 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.35□□□□□ -1.39
OTOP1Q7RTM1 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.39
OTOP1Q7RTM1 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
OTOP1Q7RTM1 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
OTOP1Q7RTM1 AC073055.1-201ENST00000456901 1621 ntBASIC6.35□□□□□ -1.39
OTOP1Q7RTM1 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
OTOP1Q7RTM1 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
OTOP1Q7RTM1 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.39
OTOP1Q7RTM1 DDX18P6-201ENST00000450119 1997 ntBASIC6.35□□□□□ -1.39
OTOP1Q7RTM1 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
OTOP1Q7RTM1 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
OTOP1Q7RTM1 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
OTOP1Q7RTM1 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC6.34□□□□□ -1.39
OTOP1Q7RTM1 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.39
OTOP1Q7RTM1 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.34□□□□□ -1.39
OTOP1Q7RTM1 AL359955.1-201ENST00000455242 3275 ntBASIC6.34□□□□□ -1.39
OTOP1Q7RTM1 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.34□□□□□ -1.39
OTOP1Q7RTM1 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
OTOP1Q7RTM1 AC126755.2-208ENST00000327792 462 ntBASIC6.34□□□□□ -1.39
OTOP1Q7RTM1 AC138969.1-213ENST00000331436 462 ntBASIC6.34□□□□□ -1.39
OTOP1Q7RTM1 SNORA17.1-201ENST00000362945 126 ntBASIC6.34□□□□□ -1.39
OTOP1Q7RTM1 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
OTOP1Q7RTM1 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
OTOP1Q7RTM1 RNU1-149P-201ENST00000390870 161 ntBASIC6.34□□□□□ -1.39
OTOP1Q7RTM1 RNA5SP487-201ENST00000410186 122 ntBASIC6.34□□□□□ -1.39
OTOP1Q7RTM1 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC6.34□□□□□ -1.39
OTOP1Q7RTM1 HMGB3P31-201ENST00000413333 595 ntBASIC6.34□□□□□ -1.39
OTOP1Q7RTM1 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC6.34□□□□□ -1.39
OTOP1Q7RTM1 RNF10P1-201ENST00000418589 369 ntBASIC6.34□□□□□ -1.39
OTOP1Q7RTM1 AC093655.2-201ENST00000425735 631 ntBASIC6.34□□□□□ -1.39
OTOP1Q7RTM1 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC6.34□□□□□ -1.39
OTOP1Q7RTM1 CDY12P-201ENST00000440679 1015 ntBASIC6.34□□□□□ -1.39
OTOP1Q7RTM1 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC6.34□□□□□ -1.39
OTOP1Q7RTM1 CDY13P-201ENST00000445813 1015 ntBASIC6.34□□□□□ -1.39
OTOP1Q7RTM1 AL161722.1-201ENST00000446972 1032 ntBASIC6.34□□□□□ -1.39
OTOP1Q7RTM1 AC104978.1-201ENST00000449387 391 ntBASIC6.34□□□□□ -1.39
OTOP1Q7RTM1 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
OTOP1Q7RTM1 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC6.34□□□□□ -1.39
OTOP1Q7RTM1 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC6.34□□□□□ -1.39
OTOP1Q7RTM1 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC6.34□□□□□ -1.39
OTOP1Q7RTM1 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
OTOP1Q7RTM1 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC6.34□□□□□ -1.39
OTOP1Q7RTM1 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC6.34□□□□□ -1.39
OTOP1Q7RTM1 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC6.34□□□□□ -1.39
OTOP1Q7RTM1 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
OTOP1Q7RTM1 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
OTOP1Q7RTM1 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.34□□□□□ -1.39
OTOP1Q7RTM1 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC6.34□□□□□ -1.39
OTOP1Q7RTM1 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC6.34□□□□□ -1.39
OTOP1Q7RTM1 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC6.34□□□□□ -1.39
OTOP1Q7RTM1 MIR4311-201ENST00000580794 100 ntBASIC6.34□□□□□ -1.39
OTOP1Q7RTM1 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC6.34□□□□□ -1.39
OTOP1Q7RTM1 CDC42EP3P1-201ENST00000601004 764 ntBASIC6.34□□□□□ -1.39
OTOP1Q7RTM1 AP001267.4-201ENST00000602598 545 ntBASIC6.34□□□□□ -1.39
OTOP1Q7RTM1 AC109454.4-201ENST00000623411 649 ntBASIC6.34□□□□□ -1.39
OTOP1Q7RTM1 AC011815.3-201ENST00000624194 473 ntBASIC6.34□□□□□ -1.39
OTOP1Q7RTM1 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC6.34□□□□□ -1.39
OTOP1Q7RTM1 CYP4F35P-202ENST00000636121 390 ntBASIC6.34□□□□□ -1.39
OTOP1Q7RTM1 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
OTOP1Q7RTM1 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
OTOP1Q7RTM1 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
OTOP1Q7RTM1 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
OTOP1Q7RTM1 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
OTOP1Q7RTM1 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.34□□□□□ -1.39
OTOP1Q7RTM1 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
OTOP1Q7RTM1 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.39
OTOP1Q7RTM1 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
OTOP1Q7RTM1 INTS6P1-201ENST00000504674 2530 ntBASIC6.34□□□□□ -1.39
OTOP1Q7RTM1 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
OTOP1Q7RTM1 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.34□□□□□ -1.4
OTOP1Q7RTM1 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.4
OTOP1Q7RTM1 VN2R3P-201ENST00000422626 1412 ntBASIC6.33□□□□□ -1.4
OTOP1Q7RTM1 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
OTOP1Q7RTM1 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
OTOP1Q7RTM1 AL158152.1-201ENST00000602652 1435 ntBASIC6.33□□□□□ -1.4
OTOP1Q7RTM1 Z98755.1-201ENST00000407015 1384 ntBASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms