Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC5.43□□□□□ -1.54
RNF220Q5VTB9 AC111152.1-202ENST00000635848 339 ntBASIC5.43□□□□□ -1.54
RNF220Q5VTB9 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
RNF220Q5VTB9 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC5.43□□□□□ -1.54
RNF220Q5VTB9 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RNF220Q5VTB9 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
RNF220Q5VTB9 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
RNF220Q5VTB9 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.43□□□□□ -1.54
RNF220Q5VTB9 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RNF220Q5VTB9 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC5.43□□□□□ -1.54
RNF220Q5VTB9 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
RNF220Q5VTB9 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
RNF220Q5VTB9 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RNF220Q5VTB9 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
RNF220Q5VTB9 AC000374.1-201ENST00000434698 1745 ntBASIC5.43□□□□□ -1.54
RNF220Q5VTB9 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.42□□□□□ -1.54
RNF220Q5VTB9 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.42□□□□□ -1.54
RNF220Q5VTB9 CASC19-248ENST00000641674 1356 ntBASIC5.42□□□□□ -1.54
RNF220Q5VTB9 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RNF220Q5VTB9 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
RNF220Q5VTB9 MAPK10-349ENST00000641767 3661 ntBASIC5.42□□□□□ -1.54
RNF220Q5VTB9 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RNF220Q5VTB9 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.42□□□□□ -1.54
RNF220Q5VTB9 SELENOWP1-201ENST00000322792 252 ntBASIC5.42□□□□□ -1.54
RNF220Q5VTB9 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RNF220Q5VTB9 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.42□□□□□ -1.54
RNF220Q5VTB9 SNORA51.9-201ENST00000384295 124 ntBASIC5.42□□□□□ -1.54
RNF220Q5VTB9 AL049545.1-201ENST00000401856 572 ntBASIC5.42□□□□□ -1.54
RNF220Q5VTB9 AC016739.1-201ENST00000405359 345 ntBASIC5.42□□□□□ -1.54
RNF220Q5VTB9 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.42□□□□□ -1.54
RNF220Q5VTB9 PAICSP7-201ENST00000419829 962 ntBASIC5.42□□□□□ -1.54
RNF220Q5VTB9 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC5.42□□□□□ -1.54
RNF220Q5VTB9 DPRXP1-201ENST00000426312 460 ntBASIC5.42□□□□□ -1.54
RNF220Q5VTB9 RPL34P6-201ENST00000432390 345 ntBASIC5.42□□□□□ -1.54
RNF220Q5VTB9 RPL7P34-201ENST00000433316 712 ntBASIC5.42□□□□□ -1.54
RNF220Q5VTB9 RPS26P40-201ENST00000435209 294 ntBASIC5.42□□□□□ -1.54
RNF220Q5VTB9 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.42□□□□□ -1.54
RNF220Q5VTB9 RPS12P17-201ENST00000438591 377 ntBASIC5.42□□□□□ -1.54
RNF220Q5VTB9 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC5.42□□□□□ -1.54
RNF220Q5VTB9 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.42□□□□□ -1.54
RNF220Q5VTB9 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
RNF220Q5VTB9 HMGB1P48-201ENST00000446155 598 ntBASIC5.42□□□□□ -1.54
RNF220Q5VTB9 AC104306.1-201ENST00000449702 371 ntBASIC5.42□□□□□ -1.54
RNF220Q5VTB9 OR52E3P-201ENST00000452083 936 ntBASIC5.42□□□□□ -1.54
RNF220Q5VTB9 GEMIN2P1-201ENST00000454246 752 ntBASIC5.42□□□□□ -1.54
RNF220Q5VTB9 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.42□□□□□ -1.54
RNF220Q5VTB9 VN1R40P-201ENST00000455196 941 ntBASIC5.42□□□□□ -1.54
RNF220Q5VTB9 AC245028.2-201ENST00000458673 253 ntBASIC5.42□□□□□ -1.54
RNF220Q5VTB9 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC5.42□□□□□ -1.54
RNF220Q5VTB9 RN7SL269P-201ENST00000467795 305 ntBASIC5.42□□□□□ -1.54
RNF220Q5VTB9 AC006511.1-201ENST00000470614 315 ntBASIC5.42□□□□□ -1.54
RNF220Q5VTB9 MTND2P14-201ENST00000482139 351 ntBASIC5.42□□□□□ -1.54
RNF220Q5VTB9 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.42□□□□□ -1.54
RNF220Q5VTB9 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC5.42□□□□□ -1.54
RNF220Q5VTB9 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.42□□□□□ -1.54
RNF220Q5VTB9 EIF3KP3-201ENST00000514461 639 ntBASIC5.42□□□□□ -1.54
RNF220Q5VTB9 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.42□□□□□ -1.54
RNF220Q5VTB9 AC138938.1-201ENST00000515431 782 ntBASIC5.42□□□□□ -1.54
RNF220Q5VTB9 MIR2117-201ENST00000516780 80 ntBASIC5.42□□□□□ -1.54
RNF220Q5VTB9 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.42□□□□□ -1.54
RNF220Q5VTB9 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.42□□□□□ -1.54
RNF220Q5VTB9 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.42□□□□□ -1.54
RNF220Q5VTB9 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.42□□□□□ -1.54
RNF220Q5VTB9 SETP1-201ENST00000556014 845 ntBASIC5.42□□□□□ -1.54
RNF220Q5VTB9 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.42□□□□□ -1.54
RNF220Q5VTB9 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.42□□□□□ -1.54
RNF220Q5VTB9 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.42□□□□□ -1.54
RNF220Q5VTB9 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC5.42□□□□□ -1.54
RNF220Q5VTB9 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.42□□□□□ -1.54
RNF220Q5VTB9 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC5.42□□□□□ -1.54
RNF220Q5VTB9 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC5.42□□□□□ -1.54
RNF220Q5VTB9 AP003973.1-201ENST00000604639 691 ntBASIC5.42□□□□□ -1.54
RNF220Q5VTB9 AC069545.1-201ENST00000605671 358 ntBASIC5.42□□□□□ -1.54
RNF220Q5VTB9 AL136131.3-201ENST00000607600 188 ntBASIC5.42□□□□□ -1.54
RNF220Q5VTB9 AC116447.1-201ENST00000613153 453 ntBASIC5.42□□□□□ -1.54
RNF220Q5VTB9 AL021918.2-201ENST00000613415 194 ntBASIC5.42□□□□□ -1.54
RNF220Q5VTB9 AC091304.6-201ENST00000619761 202 ntBASIC5.42□□□□□ -1.54
RNF220Q5VTB9 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.42□□□□□ -1.54
RNF220Q5VTB9 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.42□□□□□ -1.54
RNF220Q5VTB9 MIR6813-201ENST00000621638 56 ntBASIC5.42□□□□□ -1.54
RNF220Q5VTB9 AP003485.2-201ENST00000623636 610 ntBASIC5.42□□□□□ -1.54
RNF220Q5VTB9 AP001962.1-201ENST00000624114 559 ntBASIC5.42□□□□□ -1.54
RNF220Q5VTB9 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC5.42□□□□□ -1.54
RNF220Q5VTB9 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.42□□□□□ -1.54
RNF220Q5VTB9 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.42□□□□□ -1.54
RNF220Q5VTB9 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
RNF220Q5VTB9 USP9YP4-201ENST00000424401 1745 ntBASIC5.42□□□□□ -1.54
RNF220Q5VTB9 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
RNF220Q5VTB9 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
RNF220Q5VTB9 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RNF220Q5VTB9 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.41□□□□□ -1.54
RNF220Q5VTB9 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RNF220Q5VTB9 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
RNF220Q5VTB9 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RNF220Q5VTB9 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
RNF220Q5VTB9 AC114947.2-201ENST00000565748 2125 ntBASIC5.41□□□□□ -1.54
RNF220Q5VTB9 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.41□□□□□ -1.54
RNF220Q5VTB9 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RNF220Q5VTB9 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
RNF220Q5VTB9 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms