Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 CCNB3-204ENST00000376042 4693 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
VARS2Q5ST30 AC016930.1-201ENST00000468766 2205 ntBASIC8.05□□□□□ -1.12
VARS2Q5ST30 C1GALT1-201ENST00000223122 6078 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
VARS2Q5ST30 YME1L1-201ENST00000326799 3994 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
VARS2Q5ST30 LPP-208ENST00000448637 5835 ntTSL 5 BASIC8.04□□□□□ -1.12
VARS2Q5ST30 METTL2A-204ENST00000616852 3150 ntTSL 2 BASIC8.04□□□□□ -1.12
VARS2Q5ST30 PTPN14-205ENST00000543945 3842 ntTSL 5 BASIC8.04□□□□□ -1.12
VARS2Q5ST30 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC8.04□□□□□ -1.12
VARS2Q5ST30 RASGRP3-202ENST00000403687 4807 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
VARS2Q5ST30 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC8.04□□□□□ -1.12
VARS2Q5ST30 GAN-202ENST00000568107 15244 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
VARS2Q5ST30 RTL9-201ENST00000465301 5426 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
VARS2Q5ST30 SNORA73B-201ENST00000363217 204 ntBASIC8.04□□□□□ -1.12
VARS2Q5ST30 AL360182.1-201ENST00000397433 468 ntBASIC8.04□□□□□ -1.12
VARS2Q5ST30 MIR548H3-201ENST00000408771 118 ntBASIC8.04□□□□□ -1.12
VARS2Q5ST30 RN7SKP207-201ENST00000411204 303 ntBASIC8.04□□□□□ -1.12
VARS2Q5ST30 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC8.04□□□□□ -1.12
VARS2Q5ST30 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC8.04□□□□□ -1.12
VARS2Q5ST30 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC8.04□□□□□ -1.12
VARS2Q5ST30 AL773545.1-201ENST00000425632 347 ntTSL 5 BASIC8.04□□□□□ -1.12
VARS2Q5ST30 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC8.04□□□□□ -1.12
VARS2Q5ST30 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC8.04□□□□□ -1.12
VARS2Q5ST30 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC8.04□□□□□ -1.12
VARS2Q5ST30 RPS7P4-201ENST00000444127 582 ntBASIC8.04□□□□□ -1.12
VARS2Q5ST30 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC8.04□□□□□ -1.12
VARS2Q5ST30 AL139109.1-201ENST00000455491 297 ntBASIC8.04□□□□□ -1.12
VARS2Q5ST30 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC8.04□□□□□ -1.12
VARS2Q5ST30 AC116049.2-201ENST00000508572 754 ntTSL 4 BASIC8.04□□□□□ -1.12
VARS2Q5ST30 AC006499.2-201ENST00000513470 337 ntBASIC8.04□□□□□ -1.12
VARS2Q5ST30 RNU6-885P-201ENST00000516607 104 ntBASIC8.04□□□□□ -1.12
VARS2Q5ST30 RNU6-410P-201ENST00000517006 107 ntBASIC8.04□□□□□ -1.12
VARS2Q5ST30 Y_RNA.715-201ENST00000517082 110 ntBASIC8.04□□□□□ -1.12
VARS2Q5ST30 AC087257.2-201ENST00000538759 928 ntBASIC8.04□□□□□ -1.12
VARS2Q5ST30 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC8.04□□□□□ -1.12
VARS2Q5ST30 KDM1B-203ENST00000546309 496 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
VARS2Q5ST30 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC8.04□□□□□ -1.12
VARS2Q5ST30 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC8.04□□□□□ -1.12
VARS2Q5ST30 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC8.04□□□□□ -1.12
VARS2Q5ST30 AC011193.2-201ENST00000582638 367 ntBASIC8.04□□□□□ -1.12
VARS2Q5ST30 AC006116.6-201ENST00000593258 1103 ntBASIC8.04□□□□□ -1.12
VARS2Q5ST30 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC8.04□□□□□ -1.12
VARS2Q5ST30 CUX2P1-201ENST00000606426 298 ntBASIC8.04□□□□□ -1.12
VARS2Q5ST30 MIR8082-201ENST00000612488 81 ntBASIC8.04□□□□□ -1.12
VARS2Q5ST30 METAP1-212ENST00000625963 147 ntTSL 5 BASIC8.04□□□□□ -1.12
VARS2Q5ST30 AC073488.8-201ENST00000631952 757 ntBASIC8.04□□□□□ -1.12
VARS2Q5ST30 AL606534.2-204ENST00000635008 178 ntBASIC8.04□□□□□ -1.12
VARS2Q5ST30 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
VARS2Q5ST30 GPR151-201ENST00000311104 3088 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
VARS2Q5ST30 NDUFA9-201ENST00000266544 8363 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
VARS2Q5ST30 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
VARS2Q5ST30 IPO9-201ENST00000361565 11435 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
VARS2Q5ST30 BRS3-201ENST00000370648 2833 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
VARS2Q5ST30 APP-209ENST00000440126 2846 ntTSL 2 BASIC8.04□□□□□ -1.12
VARS2Q5ST30 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC8.04□□□□□ -1.12
VARS2Q5ST30 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
VARS2Q5ST30 CAST-228ENST00000509903 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
VARS2Q5ST30 SOX6-202ENST00000396356 8865 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
VARS2Q5ST30 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC8.04□□□□□ -1.12
VARS2Q5ST30 DCAF5-208ENST00000556847 2791 ntTSL 5 BASIC8.04□□□□□ -1.12
VARS2Q5ST30 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC8.03□□□□□ -1.12
VARS2Q5ST30 PDIK1L-202ENST00000374271 4279 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
VARS2Q5ST30 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
VARS2Q5ST30 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
VARS2Q5ST30 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC8.03□□□□□ -1.12
VARS2Q5ST30 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC8.03□□□□□ -1.12
VARS2Q5ST30 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC8.03□□□□□ -1.12
VARS2Q5ST30 AC004972.1-201ENST00000623934 2209 ntBASIC8.03□□□□□ -1.12
VARS2Q5ST30 ZNF45-204ENST00000589703 2409 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
VARS2Q5ST30 ZC3H6-202ENST00000409871 11542 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
VARS2Q5ST30 TMPPE-202ENST00000416695 3451 ntAPPRIS ALT2 TSL 2 BASIC8.03□□□□□ -1.12
VARS2Q5ST30 PIWIL2-204ENST00000521356 3488 ntTSL 2 BASIC8.03□□□□□ -1.12
VARS2Q5ST30 CDY1-202ENST00000361963 2177 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
VARS2Q5ST30 FAM217B-202ENST00000360816 5036 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
VARS2Q5ST30 ZNF812P-201ENST00000457674 1694 ntBASIC8.03□□□□□ -1.12
VARS2Q5ST30 AL355377.1-201ENST00000621125 1653 ntBASIC8.03□□□□□ -1.12
VARS2Q5ST30 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
VARS2Q5ST30 SNORD113-7-201ENST00000363762 77 ntBASIC8.03□□□□□ -1.12
VARS2Q5ST30 RNY1P12-201ENST00000364251 105 ntBASIC8.03□□□□□ -1.12
VARS2Q5ST30 THEM5-201ENST00000368817 984 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
VARS2Q5ST30 RNU6-730P-201ENST00000383954 104 ntBASIC8.03□□□□□ -1.12
VARS2Q5ST30 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC8.03□□□□□ -1.12
VARS2Q5ST30 SNORA11.3-201ENST00000408471 128 ntBASIC8.03□□□□□ -1.12
VARS2Q5ST30 SNORA11C-201ENST00000408532 129 ntBASIC8.03□□□□□ -1.12
VARS2Q5ST30 BOLA3P4-201ENST00000418151 400 ntBASIC8.03□□□□□ -1.12
VARS2Q5ST30 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC8.03□□□□□ -1.12
VARS2Q5ST30 RNU7-157P-201ENST00000459600 66 ntBASIC8.03□□□□□ -1.12
VARS2Q5ST30 RPL23AP11-201ENST00000475260 469 ntBASIC8.03□□□□□ -1.12
VARS2Q5ST30 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC8.03□□□□□ -1.12
VARS2Q5ST30 RPL7P43-201ENST00000478876 753 ntBASIC8.03□□□□□ -1.12
VARS2Q5ST30 RPL34P33-201ENST00000486062 334 ntBASIC8.03□□□□□ -1.12
VARS2Q5ST30 GAPDHP62-201ENST00000515313 990 ntBASIC8.03□□□□□ -1.12
VARS2Q5ST30 AC023595.1-201ENST00000536216 564 ntTSL 4 BASIC8.03□□□□□ -1.12
VARS2Q5ST30 DHX8-202ENST00000540306 3809 ntTSL 2 BASIC8.03□□□□□ -1.12
VARS2Q5ST30 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC8.03□□□□□ -1.12
VARS2Q5ST30 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC8.03□□□□□ -1.12
VARS2Q5ST30 SCIMP-204ENST00000574297 569 ntAPPRIS ALT2 TSL 3 BASIC8.03□□□□□ -1.12
VARS2Q5ST30 AC024614.1-201ENST00000577546 307 ntBASIC8.03□□□□□ -1.12
VARS2Q5ST30 PPIAP14-201ENST00000577627 496 ntBASIC8.03□□□□□ -1.12
VARS2Q5ST30 MIR3672-201ENST00000584290 82 ntBASIC8.03□□□□□ -1.12
VARS2Q5ST30 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC8.03□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms