Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC3.29□□□□□ -1.88
SYCNQ0VAF6 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.29□□□□□ -1.88
SYCNQ0VAF6 AC092162.1-201ENST00000432828 434 ntBASIC3.29□□□□□ -1.88
SYCNQ0VAF6 OR52B5P-201ENST00000435337 951 ntBASIC3.29□□□□□ -1.88
SYCNQ0VAF6 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC3.29□□□□□ -1.88
SYCNQ0VAF6 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC3.29□□□□□ -1.88
SYCNQ0VAF6 AC073587.1-201ENST00000447093 876 ntBASIC3.29□□□□□ -1.88
SYCNQ0VAF6 MTND2P25-201ENST00000449028 610 ntBASIC3.29□□□□□ -1.88
SYCNQ0VAF6 FAR2P1-206ENST00000449736 709 ntBASIC3.29□□□□□ -1.88
SYCNQ0VAF6 HMGB1P5-202ENST00000451497 985 ntBASIC3.29□□□□□ -1.88
SYCNQ0VAF6 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC3.29□□□□□ -1.88
SYCNQ0VAF6 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC3.29□□□□□ -1.88
SYCNQ0VAF6 AC099560.2-201ENST00000457554 255 ntBASIC3.29□□□□□ -1.88
SYCNQ0VAF6 EIF4A2P4-201ENST00000458691 1196 ntBASIC3.29□□□□□ -1.88
SYCNQ0VAF6 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC3.29□□□□□ -1.88
SYCNQ0VAF6 RN7SL172P-201ENST00000460535 303 ntBASIC3.29□□□□□ -1.88
SYCNQ0VAF6 CABYRP1-201ENST00000465493 1045 ntBASIC3.29□□□□□ -1.88
SYCNQ0VAF6 AC117394.1-201ENST00000477323 567 ntBASIC3.29□□□□□ -1.88
SYCNQ0VAF6 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SYCNQ0VAF6 AC093663.2-201ENST00000484625 313 ntBASIC3.29□□□□□ -1.88
SYCNQ0VAF6 AC107398.1-201ENST00000486904 505 ntBASIC3.29□□□□□ -1.88
SYCNQ0VAF6 RN7SL244P-201ENST00000493405 297 ntBASIC3.29□□□□□ -1.88
SYCNQ0VAF6 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC3.29□□□□□ -1.88
SYCNQ0VAF6 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC3.29□□□□□ -1.88
SYCNQ0VAF6 MTND2P31-201ENST00000512602 616 ntBASIC3.29□□□□□ -1.88
SYCNQ0VAF6 RNA5SP249-201ENST00000516127 99 ntBASIC3.29□□□□□ -1.88
SYCNQ0VAF6 IGHVII-44-2-201ENST00000517728 250 ntBASIC3.29□□□□□ -1.88
SYCNQ0VAF6 AP006245.2-201ENST00000522004 300 ntBASIC3.29□□□□□ -1.88
SYCNQ0VAF6 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC3.29□□□□□ -1.88
SYCNQ0VAF6 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC3.29□□□□□ -1.88
SYCNQ0VAF6 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SYCNQ0VAF6 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC3.29□□□□□ -1.88
SYCNQ0VAF6 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC3.29□□□□□ -1.88
SYCNQ0VAF6 CKS1BP1-201ENST00000555221 240 ntBASIC3.29□□□□□ -1.88
SYCNQ0VAF6 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.29□□□□□ -1.88
SYCNQ0VAF6 AC116553.2-201ENST00000564203 463 ntBASIC3.29□□□□□ -1.88
SYCNQ0VAF6 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC3.29□□□□□ -1.88
SYCNQ0VAF6 AC005242.1-201ENST00000585658 438 ntBASIC3.29□□□□□ -1.88
SYCNQ0VAF6 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC3.29□□□□□ -1.88
SYCNQ0VAF6 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC3.29□□□□□ -1.88
SYCNQ0VAF6 TAS2R6P-201ENST00000605022 826 ntBASIC3.29□□□□□ -1.88
SYCNQ0VAF6 AL353600.1-201ENST00000608148 251 ntBASIC3.29□□□□□ -1.88
SYCNQ0VAF6 AP005432.2-201ENST00000608162 586 ntBASIC3.29□□□□□ -1.88
SYCNQ0VAF6 MIR6768-201ENST00000610734 72 ntBASIC3.29□□□□□ -1.88
SYCNQ0VAF6 AC011472.4-201ENST00000615848 491 ntBASIC3.29□□□□□ -1.88
SYCNQ0VAF6 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC3.29□□□□□ -1.88
SYCNQ0VAF6 AP002967.1-201ENST00000624203 539 ntBASIC3.29□□□□□ -1.88
SYCNQ0VAF6 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC3.29□□□□□ -1.88
SYCNQ0VAF6 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC3.29□□□□□ -1.88
SYCNQ0VAF6 OR52B5P-202ENST00000641118 1110 ntBASIC3.29□□□□□ -1.88
SYCNQ0VAF6 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SYCNQ0VAF6 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SYCNQ0VAF6 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
SYCNQ0VAF6 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
SYCNQ0VAF6 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC3.29□□□□□ -1.88
SYCNQ0VAF6 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SYCNQ0VAF6 AC068446.1-201ENST00000556425 1549 ntBASIC3.29□□□□□ -1.88
SYCNQ0VAF6 AC009313.2-201ENST00000417893 1941 ntBASIC3.29□□□□□ -1.88
SYCNQ0VAF6 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SYCNQ0VAF6 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
SYCNQ0VAF6 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC3.28□□□□□ -1.88
SYCNQ0VAF6 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SYCNQ0VAF6 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
SYCNQ0VAF6 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC3.28□□□□□ -1.88
SYCNQ0VAF6 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SYCNQ0VAF6 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC3.28□□□□□ -1.88
SYCNQ0VAF6 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SYCNQ0VAF6 LRRC37BP1-201ENST00000398851 714 ntBASIC3.28□□□□□ -1.88
SYCNQ0VAF6 UBE2V1P15-201ENST00000407776 448 ntBASIC3.28□□□□□ -1.88
SYCNQ0VAF6 SNORA77-201ENST00000408716 125 ntBASIC3.28□□□□□ -1.88
SYCNQ0VAF6 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC3.28□□□□□ -1.88
SYCNQ0VAF6 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC3.28□□□□□ -1.88
SYCNQ0VAF6 TRAPPC2P5-201ENST00000426293 308 ntBASIC3.28□□□□□ -1.88
SYCNQ0VAF6 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC3.28□□□□□ -1.88
SYCNQ0VAF6 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC3.28□□□□□ -1.88
SYCNQ0VAF6 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC3.28□□□□□ -1.88
SYCNQ0VAF6 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.28□□□□□ -1.88
SYCNQ0VAF6 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC3.28□□□□□ -1.88
SYCNQ0VAF6 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC3.28□□□□□ -1.88
SYCNQ0VAF6 RPS29P9-201ENST00000440360 171 ntBASIC3.28□□□□□ -1.88
SYCNQ0VAF6 OR7E125P-201ENST00000443450 846 ntBASIC3.28□□□□□ -1.88
SYCNQ0VAF6 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.28□□□□□ -1.88
SYCNQ0VAF6 AC099063.2-201ENST00000446360 662 ntBASIC3.28□□□□□ -1.88
SYCNQ0VAF6 KNOP1P3-201ENST00000446933 426 ntBASIC3.28□□□□□ -1.88
SYCNQ0VAF6 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC3.28□□□□□ -1.88
SYCNQ0VAF6 AL389915.2-201ENST00000454576 441 ntBASIC3.28□□□□□ -1.88
SYCNQ0VAF6 AL356981.1-201ENST00000454879 684 ntBASIC3.28□□□□□ -1.88
SYCNQ0VAF6 AC011225.1-201ENST00000457751 369 ntBASIC3.28□□□□□ -1.88
SYCNQ0VAF6 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC3.28□□□□□ -1.88
SYCNQ0VAF6 AC097484.1-201ENST00000471148 389 ntBASIC3.28□□□□□ -1.88
SYCNQ0VAF6 RPS18P6-201ENST00000476880 458 ntBASIC3.28□□□□□ -1.88
SYCNQ0VAF6 METTL15P1-201ENST00000481421 1045 ntBASIC3.28□□□□□ -1.88
SYCNQ0VAF6 RN7SL809P-201ENST00000482040 297 ntBASIC3.28□□□□□ -1.88
SYCNQ0VAF6 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC3.28□□□□□ -1.88
SYCNQ0VAF6 RN7SL101P-201ENST00000496350 279 ntBASIC3.28□□□□□ -1.88
SYCNQ0VAF6 ARL4AP1-201ENST00000503220 705 ntBASIC3.28□□□□□ -1.88
SYCNQ0VAF6 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC3.28□□□□□ -1.88
SYCNQ0VAF6 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC3.28□□□□□ -1.88
SYCNQ0VAF6 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC3.28□□□□□ -1.88
SYCNQ0VAF6 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms