Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 RPL7AP61-201ENST00000443410 636 ntBASIC5.42□□□□□ -1.54
CCNA1P78396 NPM1P39-201ENST00000449818 867 ntBASIC5.42□□□□□ -1.54
CCNA1P78396 OR52E3P-201ENST00000452083 936 ntBASIC5.42□□□□□ -1.54
CCNA1P78396 AC011276.1-201ENST00000469688 323 ntBASIC5.42□□□□□ -1.54
CCNA1P78396 AC010618.1-201ENST00000469924 477 ntBASIC5.42□□□□□ -1.54
CCNA1P78396 AC109327.1-201ENST00000471666 403 ntBASIC5.42□□□□□ -1.54
CCNA1P78396 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CCNA1P78396 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.42□□□□□ -1.54
CCNA1P78396 RN7SKP21-201ENST00000516503 220 ntBASIC5.42□□□□□ -1.54
CCNA1P78396 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC5.42□□□□□ -1.54
CCNA1P78396 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.42□□□□□ -1.54
CCNA1P78396 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.42□□□□□ -1.54
CCNA1P78396 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.42□□□□□ -1.54
CCNA1P78396 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.42□□□□□ -1.54
CCNA1P78396 KPNA2P3-201ENST00000584190 848 ntBASIC5.42□□□□□ -1.54
CCNA1P78396 AL135786.2-201ENST00000608422 615 ntBASIC5.42□□□□□ -1.54
CCNA1P78396 AC026367.3-201ENST00000619032 590 ntBASIC5.42□□□□□ -1.54
CCNA1P78396 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.42□□□□□ -1.54
CCNA1P78396 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.42□□□□□ -1.54
CCNA1P78396 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCNA1P78396 VPS35P1-201ENST00000563400 1518 ntBASIC5.42□□□□□ -1.54
CCNA1P78396 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
CCNA1P78396 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCNA1P78396 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.42□□□□□ -1.54
CCNA1P78396 AC005005.4-201ENST00000623789 16698 ntBASIC5.42□□□□□ -1.54
CCNA1P78396 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCNA1P78396 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
CCNA1P78396 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCNA1P78396 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCNA1P78396 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCNA1P78396 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCNA1P78396 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CCNA1P78396 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
CCNA1P78396 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCNA1P78396 THAP12P8-201ENST00000447914 2115 ntBASIC5.41□□□□□ -1.54
CCNA1P78396 AP000756.2-201ENST00000624168 2567 ntBASIC5.41□□□□□ -1.54
CCNA1P78396 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCNA1P78396 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCNA1P78396 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCNA1P78396 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCNA1P78396 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CCNA1P78396 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.41□□□□□ -1.54
CCNA1P78396 TRGV7-201ENST00000427089 353 ntBASIC5.41□□□□□ -1.54
CCNA1P78396 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC5.41□□□□□ -1.54
CCNA1P78396 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.41□□□□□ -1.54
CCNA1P78396 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.41□□□□□ -1.54
CCNA1P78396 AC079168.2-201ENST00000453977 416 ntBASIC5.41□□□□□ -1.54
CCNA1P78396 MTND4LP2-201ENST00000502312 285 ntBASIC5.41□□□□□ -1.54
CCNA1P78396 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.41□□□□□ -1.54
CCNA1P78396 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.41□□□□□ -1.54
CCNA1P78396 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.41□□□□□ -1.54
CCNA1P78396 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
CCNA1P78396 MTND2P13-201ENST00000577438 1039 ntBASIC5.41□□□□□ -1.54
CCNA1P78396 AC103792.1-201ENST00000603591 919 ntBASIC5.41□□□□□ -1.54
CCNA1P78396 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC5.41□□□□□ -1.54
CCNA1P78396 AL121890.3-201ENST00000618494 516 ntBASIC5.41□□□□□ -1.54
CCNA1P78396 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.41□□□□□ -1.54
CCNA1P78396 AP003499.2-201ENST00000624100 483 ntBASIC5.41□□□□□ -1.54
CCNA1P78396 AC068724.3-201ENST00000625906 87 ntBASIC5.41□□□□□ -1.54
CCNA1P78396 U3.53-201ENST00000628922 216 ntBASIC5.41□□□□□ -1.54
CCNA1P78396 FTO-223ENST00000640179 210 ntTSL 5 BASIC5.41□□□□□ -1.54
CCNA1P78396 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.41□□□□□ -1.54
CCNA1P78396 RAD17P1-201ENST00000418130 2042 ntBASIC5.41□□□□□ -1.54
CCNA1P78396 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CCNA1P78396 AC108467.2-201ENST00000617640 1597 ntBASIC5.41□□□□□ -1.54
CCNA1P78396 AC009951.1-201ENST00000623674 2614 ntBASIC5.41□□□□□ -1.54
CCNA1P78396 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.41□□□□□ -1.54
CCNA1P78396 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
CCNA1P78396 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
CCNA1P78396 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CCNA1P78396 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.54
CCNA1P78396 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
CCNA1P78396 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CCNA1P78396 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.54
CCNA1P78396 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC5.4□□□□□ -1.54
CCNA1P78396 RNA5SP187-201ENST00000384400 119 ntBASIC5.4□□□□□ -1.54
CCNA1P78396 VDAC2P1-201ENST00000399358 958 ntBASIC5.4□□□□□ -1.54
CCNA1P78396 MIR1193-201ENST00000408109 78 ntBASIC5.4□□□□□ -1.54
CCNA1P78396 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CCNA1P78396 AC013429.2-201ENST00000418798 781 ntBASIC5.4□□□□□ -1.54
CCNA1P78396 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC5.4□□□□□ -1.54
CCNA1P78396 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.4□□□□□ -1.54
CCNA1P78396 RPL7L1P1-201ENST00000448259 785 ntBASIC5.4□□□□□ -1.54
CCNA1P78396 NUTF2P7-201ENST00000453086 375 ntBASIC5.4□□□□□ -1.54
CCNA1P78396 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.4□□□□□ -1.54
CCNA1P78396 AC025674.1-201ENST00000507074 324 ntBASIC5.4□□□□□ -1.54
CCNA1P78396 AC106806.2-201ENST00000509365 500 ntBASIC5.4□□□□□ -1.54
CCNA1P78396 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.4□□□□□ -1.54
CCNA1P78396 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.4□□□□□ -1.54
CCNA1P78396 AC027216.1-201ENST00000577726 685 ntBASIC5.4□□□□□ -1.54
CCNA1P78396 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
CCNA1P78396 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC5.4□□□□□ -1.54
CCNA1P78396 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.4□□□□□ -1.54
CCNA1P78396 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.4□□□□□ -1.54
CCNA1P78396 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.4□□□□□ -1.54
CCNA1P78396 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CCNA1P78396 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.4□□□□□ -1.54
CCNA1P78396 TMEM30CP-203ENST00000637814 1035 ntBASIC5.4□□□□□ -1.54
CCNA1P78396 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CCNA1P78396 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.4□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms