Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AC018628.1-201ENST00000624147 3819 ntBASIC5.28□□□□□ -1.56
CLRN1P58418 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.28□□□□□ -1.56
CLRN1P58418 AC130304.1-201ENST00000622942 2385 ntBASIC5.28□□□□□ -1.56
CLRN1P58418 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLRN1P58418 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLRN1P58418 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.28□□□□□ -1.56
CLRN1P58418 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLRN1P58418 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
CLRN1P58418 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLRN1P58418 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC5.28□□□□□ -1.56
CLRN1P58418 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CLRN1P58418 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.28□□□□□ -1.56
CLRN1P58418 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLRN1P58418 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CLRN1P58418 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLRN1P58418 RNU6-500P-201ENST00000362349 107 ntBASIC5.28□□□□□ -1.56
CLRN1P58418 RN7SKP171-201ENST00000364417 303 ntBASIC5.28□□□□□ -1.56
CLRN1P58418 Y_RNA.311-201ENST00000365068 96 ntBASIC5.28□□□□□ -1.56
CLRN1P58418 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLRN1P58418 RN7SKP142-201ENST00000411236 328 ntBASIC5.28□□□□□ -1.56
CLRN1P58418 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.28□□□□□ -1.56
CLRN1P58418 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC5.28□□□□□ -1.56
CLRN1P58418 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.28□□□□□ -1.56
CLRN1P58418 BLOC1S2P1-201ENST00000428431 301 ntBASIC5.28□□□□□ -1.56
CLRN1P58418 RPL12P16-201ENST00000431098 498 ntBASIC5.28□□□□□ -1.56
CLRN1P58418 RPL21P110-201ENST00000433345 446 ntBASIC5.28□□□□□ -1.56
CLRN1P58418 AC073410.1-201ENST00000435125 589 ntBASIC5.28□□□□□ -1.56
CLRN1P58418 AL445928.1-201ENST00000435545 222 ntBASIC5.28□□□□□ -1.56
CLRN1P58418 BX679664.2-201ENST00000439282 283 ntBASIC5.28□□□□□ -1.56
CLRN1P58418 RPS7P3-201ENST00000443360 580 ntBASIC5.28□□□□□ -1.56
CLRN1P58418 AL591363.1-201ENST00000450091 483 ntBASIC5.28□□□□□ -1.56
CLRN1P58418 DDX39BP2-208ENST00000453923 258 ntBASIC5.28□□□□□ -1.56
CLRN1P58418 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC5.28□□□□□ -1.56
CLRN1P58418 AC118758.1-202ENST00000454719 225 ntBASIC5.28□□□□□ -1.56
CLRN1P58418 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.28□□□□□ -1.56
CLRN1P58418 RNU6-956P-201ENST00000458868 103 ntBASIC5.28□□□□□ -1.56
CLRN1P58418 RNU1-88P-201ENST00000459274 128 ntBASIC5.28□□□□□ -1.56
CLRN1P58418 AL035404.1-201ENST00000497982 568 ntBASIC5.28□□□□□ -1.56
CLRN1P58418 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.28□□□□□ -1.56
CLRN1P58418 TOMM22P4-201ENST00000511318 336 ntBASIC5.28□□□□□ -1.56
CLRN1P58418 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC5.28□□□□□ -1.56
CLRN1P58418 snoU109.5-201ENST00000516231 132 ntBASIC5.28□□□□□ -1.56
CLRN1P58418 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.28□□□□□ -1.56
CLRN1P58418 AP003396.4-201ENST00000527574 265 ntBASIC5.28□□□□□ -1.56
CLRN1P58418 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC5.28□□□□□ -1.56
CLRN1P58418 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.28□□□□□ -1.56
CLRN1P58418 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC5.28□□□□□ -1.56
CLRN1P58418 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLRN1P58418 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC5.28□□□□□ -1.56
CLRN1P58418 AC002310.3-201ENST00000569728 723 ntBASIC5.28□□□□□ -1.56
CLRN1P58418 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.28□□□□□ -1.56
CLRN1P58418 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5.28□□□□□ -1.56
CLRN1P58418 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.28□□□□□ -1.56
CLRN1P58418 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC5.28□□□□□ -1.56
CLRN1P58418 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.28□□□□□ -1.56
CLRN1P58418 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
CLRN1P58418 AC068768.2-201ENST00000602352 343 ntBASIC5.28□□□□□ -1.56
CLRN1P58418 AC124916.2-201ENST00000604416 224 ntBASIC5.28□□□□□ -1.56
CLRN1P58418 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.28□□□□□ -1.56
CLRN1P58418 AC092266.1-201ENST00000610958 165 ntBASIC5.28□□□□□ -1.56
CLRN1P58418 MIR6806-201ENST00000622141 64 ntBASIC5.28□□□□□ -1.56
CLRN1P58418 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.28□□□□□ -1.56
CLRN1P58418 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.28□□□□□ -1.56
CLRN1P58418 AC127502.3-201ENST00000636170 1206 ntBASIC5.28□□□□□ -1.56
CLRN1P58418 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.28□□□□□ -1.56
CLRN1P58418 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLRN1P58418 AL359955.1-201ENST00000455242 3275 ntBASIC5.28□□□□□ -1.56
CLRN1P58418 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC5.28□□□□□ -1.56
CLRN1P58418 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CLRN1P58418 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC5.28□□□□□ -1.56
CLRN1P58418 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
CLRN1P58418 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CLRN1P58418 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.28□□□□□ -1.56
CLRN1P58418 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC5.28□□□□□ -1.56
CLRN1P58418 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLRN1P58418 AL353743.4-201ENST00000422653 1547 ntBASIC5.28□□□□□ -1.56
CLRN1P58418 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.28□□□□□ -1.56
CLRN1P58418 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.27□□□□□ -1.57
CLRN1P58418 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.27□□□□□ -1.57
CLRN1P58418 AC005224.3-201ENST00000584683 2140 ntBASIC5.27□□□□□ -1.57
CLRN1P58418 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLRN1P58418 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
CLRN1P58418 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.27□□□□□ -1.57
CLRN1P58418 AC007159.1-201ENST00000566529 4706 ntBASIC5.27□□□□□ -1.57
CLRN1P58418 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.27□□□□□ -1.57
CLRN1P58418 AC027514.1-201ENST00000588561 1603 ntBASIC5.27□□□□□ -1.57
CLRN1P58418 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLRN1P58418 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.27□□□□□ -1.57
CLRN1P58418 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.27□□□□□ -1.57
CLRN1P58418 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLRN1P58418 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
CLRN1P58418 RN7SKP128-201ENST00000364270 303 ntBASIC5.27□□□□□ -1.57
CLRN1P58418 RNU6-621P-201ENST00000364752 109 ntBASIC5.27□□□□□ -1.57
CLRN1P58418 SNORA51.9-201ENST00000384295 124 ntBASIC5.27□□□□□ -1.57
CLRN1P58418 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CLRN1P58418 MIR1275-201ENST00000408770 80 ntBASIC5.27□□□□□ -1.57
CLRN1P58418 RNU2-42P-201ENST00000410697 113 ntBASIC5.27□□□□□ -1.57
CLRN1P58418 PGBD4P8-201ENST00000412993 562 ntBASIC5.27□□□□□ -1.57
CLRN1P58418 UBE2V1P10-201ENST00000414685 269 ntBASIC5.27□□□□□ -1.57
CLRN1P58418 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms