Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
CLIP1P30622 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CLIP1P30622 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CLIP1P30622 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
CLIP1P30622 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
CLIP1P30622 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC7.11□□□□□ -1.27
CLIP1P30622 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
CLIP1P30622 SNORA74C-2-201ENST00000411179 201 ntBASIC7.1□□□□□ -1.27
CLIP1P30622 AC011933.1-201ENST00000413334 321 ntBASIC7.1□□□□□ -1.27
CLIP1P30622 RPL23AP52-201ENST00000439311 478 ntBASIC7.1□□□□□ -1.27
CLIP1P30622 AC114495.1-201ENST00000441274 436 ntBASIC7.1□□□□□ -1.27
CLIP1P30622 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC7.1□□□□□ -1.27
CLIP1P30622 AC116533.1-201ENST00000459748 321 ntBASIC7.1□□□□□ -1.27
CLIP1P30622 AC041039.1-201ENST00000485656 536 ntBASIC7.1□□□□□ -1.27
CLIP1P30622 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CLIP1P30622 SNORA70.11-201ENST00000515987 138 ntBASIC7.1□□□□□ -1.27
CLIP1P30622 SNORA70.13-201ENST00000516116 138 ntBASIC7.1□□□□□ -1.27
CLIP1P30622 MIR1254-2-201ENST00000579553 63 ntBASIC7.1□□□□□ -1.27
CLIP1P30622 RN7SL435P-201ENST00000584418 282 ntBASIC7.1□□□□□ -1.27
CLIP1P30622 AC091178.1-203ENST00000584586 279 ntBASIC7.1□□□□□ -1.27
CLIP1P30622 COX6CP4-201ENST00000605798 228 ntBASIC7.1□□□□□ -1.27
CLIP1P30622 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
CLIP1P30622 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC7.1□□□□□ -1.27
CLIP1P30622 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CLIP1P30622 AL603750.1-201ENST00000624216 1717 ntBASIC7.1□□□□□ -1.27
CLIP1P30622 AC083837.1-201ENST00000565297 2994 ntBASIC7.1□□□□□ -1.27
CLIP1P30622 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC7.1□□□□□ -1.27
CLIP1P30622 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC7.1□□□□□ -1.27
CLIP1P30622 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC7.1□□□□□ -1.27
CLIP1P30622 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CLIP1P30622 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CLIP1P30622 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
CLIP1P30622 ARAFP1-201ENST00000422172 605 ntBASIC7.1□□□□□ -1.27
CLIP1P30622 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CLIP1P30622 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC7.1□□□□□ -1.27
CLIP1P30622 AC113403.1-201ENST00000604910 193 ntBASIC7.1□□□□□ -1.27
CLIP1P30622 ARF4P1-201ENST00000605447 541 ntBASIC7.1□□□□□ -1.27
CLIP1P30622 AC023043.4-201ENST00000612081 449 ntBASIC7.1□□□□□ -1.27
CLIP1P30622 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC7.1□□□□□ -1.27
CLIP1P30622 ZYXP1-201ENST00000617638 118 ntBASIC7.1□□□□□ -1.27
CLIP1P30622 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
CLIP1P30622 AC007546.1-201ENST00000619452 559 ntBASIC7.1□□□□□ -1.27
CLIP1P30622 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CLIP1P30622 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC7.09□□□□□ -1.27
CLIP1P30622 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC7.09□□□□□ -1.27
CLIP1P30622 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CLIP1P30622 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC7.09□□□□□ -1.27
CLIP1P30622 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
CLIP1P30622 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CLIP1P30622 AC003985.2-201ENST00000562268 1669 ntBASIC7.09□□□□□ -1.27
CLIP1P30622 AL358176.3-201ENST00000420757 454 ntBASIC7.09□□□□□ -1.28
CLIP1P30622 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC7.09□□□□□ -1.28
CLIP1P30622 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC7.09□□□□□ -1.28
CLIP1P30622 PHBP16-201ENST00000446318 950 ntBASIC7.09□□□□□ -1.28
CLIP1P30622 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC7.09□□□□□ -1.28
CLIP1P30622 AC012671.1-201ENST00000451912 203 ntBASIC7.09□□□□□ -1.28
CLIP1P30622 AL445433.1-201ENST00000457507 257 ntBASIC7.09□□□□□ -1.28
CLIP1P30622 RPS27AP17-201ENST00000463344 455 ntBASIC7.09□□□□□ -1.28
CLIP1P30622 CR383656.1-201ENST00000484916 377 ntBASIC7.09□□□□□ -1.28
CLIP1P30622 RN7SL691P-201ENST00000494487 301 ntBASIC7.09□□□□□ -1.28
CLIP1P30622 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC7.09□□□□□ -1.28
CLIP1P30622 AC091979.2-201ENST00000607514 214 ntBASIC7.09□□□□□ -1.28
CLIP1P30622 AC024941.1-201ENST00000612250 334 ntBASIC7.09□□□□□ -1.28
CLIP1P30622 AP003497.2-201ENST00000624220 967 ntBASIC7.09□□□□□ -1.28
CLIP1P30622 AC140479.6-201ENST00000633535 357 ntBASIC7.09□□□□□ -1.28
CLIP1P30622 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
CLIP1P30622 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC7.09□□□□□ -1.28
CLIP1P30622 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC7.09□□□□□ -1.28
CLIP1P30622 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CLIP1P30622 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CLIP1P30622 AC112198.2-201ENST00000426589 6996 ntBASIC7.08□□□□□ -1.28
CLIP1P30622 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC7.08□□□□□ -1.28
CLIP1P30622 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC7.08□□□□□ -1.28
CLIP1P30622 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
CLIP1P30622 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC7.08□□□□□ -1.28
CLIP1P30622 RNA5SP388-201ENST00000362584 119 ntBASIC7.08□□□□□ -1.28
CLIP1P30622 RPEP2-201ENST00000432149 701 ntBASIC7.08□□□□□ -1.28
CLIP1P30622 AC114755.5-201ENST00000447760 831 ntBASIC7.08□□□□□ -1.28
CLIP1P30622 FPGT-203ENST00000467578 601 ntTSL 2 BASIC7.08□□□□□ -1.28
CLIP1P30622 UQCRHP4-201ENST00000471686 272 ntBASIC7.08□□□□□ -1.28
CLIP1P30622 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CLIP1P30622 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC7.08□□□□□ -1.28
CLIP1P30622 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CLIP1P30622 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CLIP1P30622 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CLIP1P30622 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CLIP1P30622 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC7.07□□□□□ -1.28
CLIP1P30622 RNU1-13P-201ENST00000384499 162 ntBASIC7.07□□□□□ -1.28
CLIP1P30622 CDY14P-201ENST00000431260 1014 ntBASIC7.07□□□□□ -1.28
CLIP1P30622 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC7.07□□□□□ -1.28
CLIP1P30622 CDY12P-201ENST00000440679 1015 ntBASIC7.07□□□□□ -1.28
CLIP1P30622 CDY13P-201ENST00000445813 1015 ntBASIC7.07□□□□□ -1.28
CLIP1P30622 CDY23P-201ENST00000451661 1014 ntBASIC7.07□□□□□ -1.28
CLIP1P30622 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC7.07□□□□□ -1.28
CLIP1P30622 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC7.07□□□□□ -1.28
CLIP1P30622 AC079587.1-201ENST00000603846 277 ntBASIC7.07□□□□□ -1.28
CLIP1P30622 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC7.07□□□□□ -1.28
CLIP1P30622 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC7.07□□□□□ -1.28
CLIP1P30622 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CLIP1P30622 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms