Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AL121890.1-201ENST00000435457 205 ntBASIC1.96□□□□□ -2.1
USH2AO75445 AC104164.2-201ENST00000496953 495 ntBASIC1.96□□□□□ -2.1
USH2AO75445 AK4P6-201ENST00000505168 528 ntBASIC1.96□□□□□ -2.1
USH2AO75445 AC069306.1-201ENST00000507006 843 ntBASIC1.96□□□□□ -2.1
USH2AO75445 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC1.96□□□□□ -2.1
USH2AO75445 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC1.96□□□□□ -2.1
USH2AO75445 AL139124.1-201ENST00000609123 421 ntBASIC1.96□□□□□ -2.1
USH2AO75445 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC1.96□□□□□ -2.1
USH2AO75445 FP236240.3-201ENST00000623061 327 ntBASIC1.96□□□□□ -2.1
USH2AO75445 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC1.96□□□□□ -2.1
USH2AO75445 AL133383.2-201ENST00000622958 2336 ntBASIC1.96□□□□□ -2.1
USH2AO75445 FRMPD4-202ENST00000616992 7916 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
USH2AO75445 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC1.96□□□□□ -2.1
USH2AO75445 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
USH2AO75445 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
USH2AO75445 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC1.96□□□□□ -2.1
USH2AO75445 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
USH2AO75445 BAZ2A-214ENST00000551812 8600 ntAPPRIS P3 TSL 1 (best) BASIC1.96□□□□□ -2.1
USH2AO75445 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC1.96□□□□□ -2.1
USH2AO75445 FN1-209ENST00000432072 7759 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
USH2AO75445 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC1.96□□□□□ -2.1
USH2AO75445 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
USH2AO75445 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC1.96□□□□□ -2.1
USH2AO75445 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
USH2AO75445 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
USH2AO75445 AC083902.2-201ENST00000511828 10086 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
USH2AO75445 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC1.96□□□□□ -2.1
USH2AO75445 RNA5SP513-201ENST00000364648 118 ntBASIC1.96□□□□□ -2.1
USH2AO75445 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
USH2AO75445 RNU4-6P-201ENST00000410804 122 ntBASIC1.96□□□□□ -2.1
USH2AO75445 RPS26P38-201ENST00000414476 348 ntBASIC1.96□□□□□ -2.1
USH2AO75445 FTH1P10-202ENST00000430907 550 ntBASIC1.96□□□□□ -2.1
USH2AO75445 TBCAP1-201ENST00000436520 327 ntBASIC1.96□□□□□ -2.1
USH2AO75445 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC1.96□□□□□ -2.1
USH2AO75445 IFITM8P-201ENST00000522529 394 ntBASIC1.96□□□□□ -2.1
USH2AO75445 EIF5A2P1-201ENST00000564027 460 ntBASIC1.96□□□□□ -2.1
USH2AO75445 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
USH2AO75445 FBN2-201ENST00000262464 10724 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
USH2AO75445 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
USH2AO75445 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC1.96□□□□□ -2.1
USH2AO75445 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC1.96□□□□□ -2.1
USH2AO75445 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC1.96□□□□□ -2.1
USH2AO75445 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
USH2AO75445 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
USH2AO75445 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
USH2AO75445 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
USH2AO75445 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC1.96□□□□□ -2.1
USH2AO75445 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC1.96□□□□□ -2.1
USH2AO75445 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC1.96□□□□□ -2.1
USH2AO75445 SPTB-208ENST00000556626 10153 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
USH2AO75445 USP6-205ENST00000574788 8464 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
USH2AO75445 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
USH2AO75445 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC1.96□□□□□ -2.1
USH2AO75445 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
USH2AO75445 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
USH2AO75445 CLVS2-201ENST00000275162 11485 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
USH2AO75445 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
USH2AO75445 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
USH2AO75445 MIR490-201ENST00000384865 128 ntBASIC1.96□□□□□ -2.1
USH2AO75445 QRSL1P2-201ENST00000418582 964 ntBASIC1.96□□□□□ -2.1
USH2AO75445 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC1.96□□□□□ -2.1
USH2AO75445 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC1.96□□□□□ -2.1
USH2AO75445 RN7SL601P-201ENST00000471221 293 ntBASIC1.96□□□□□ -2.1
USH2AO75445 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC1.96□□□□□ -2.1
USH2AO75445 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC1.96□□□□□ -2.1
USH2AO75445 ABBA01000935.2-201ENST00000637477 838 ntBASIC1.96□□□□□ -2.1
USH2AO75445 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC1.96□□□□□ -2.1
USH2AO75445 ARNT2-207ENST00000533983 6690 ntAPPRIS ALT1 TSL 5 BASIC1.96□□□□□ -2.1
USH2AO75445 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
USH2AO75445 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
USH2AO75445 LDHAL6CP-202ENST00000550738 3224 ntBASIC1.96□□□□□ -2.1
USH2AO75445 CSMD1-218ENST00000635120 11737 ntAPPRIS P2 TSL 5 BASIC1.96□□□□□ -2.1
USH2AO75445 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
USH2AO75445 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC1.95□□□□□ -2.1
USH2AO75445 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
USH2AO75445 UBBP2-201ENST00000376781 231 ntBASIC1.95□□□□□ -2.1
USH2AO75445 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
USH2AO75445 ZDHHC20P2-201ENST00000424108 429 ntBASIC1.95□□□□□ -2.1
USH2AO75445 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC1.95□□□□□ -2.1
USH2AO75445 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC1.95□□□□□ -2.1
USH2AO75445 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC1.95□□□□□ -2.1
USH2AO75445 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.95□□□□□ -2.1
USH2AO75445 AC010632.3-201ENST00000611377 369 ntBASIC1.95□□□□□ -2.1
USH2AO75445 AC243960.7-201ENST00000623532 707 ntBASIC1.95□□□□□ -2.1
USH2AO75445 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
USH2AO75445 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC1.95□□□□□ -2.1
USH2AO75445 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC1.95□□□□□ -2.1
USH2AO75445 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
USH2AO75445 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
USH2AO75445 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
USH2AO75445 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
USH2AO75445 ZKSCAN1-206ENST00000620510 9192 ntTSL 5 BASIC1.95□□□□□ -2.1
USH2AO75445 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC1.95□□□□□ -2.1
USH2AO75445 NFASC-204ENST00000401399 10205 ntAPPRIS ALT1 TSL 1 (best) BASIC1.95□□□□□ -2.1
USH2AO75445 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
USH2AO75445 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC1.95□□□□□ -2.1
USH2AO75445 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
USH2AO75445 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
USH2AO75445 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
USH2AO75445 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms