Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC9.24□□□□□ -0.93
TRIM35Q9UPQ4 RNU6-87P-201ENST00000607561 108 ntBASIC9.24□□□□□ -0.93
TRIM35Q9UPQ4 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC9.24□□□□□ -0.93
TRIM35Q9UPQ4 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC9.24□□□□□ -0.93
TRIM35Q9UPQ4 ARMC8-210ENST00000469044 4790 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
TRIM35Q9UPQ4 LINC02447-201ENST00000499242 1500 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
TRIM35Q9UPQ4 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
TRIM35Q9UPQ4 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
TRIM35Q9UPQ4 FTO-222ENST00000637969 2889 ntTSL 5 BASIC9.24□□□□□ -0.93
TRIM35Q9UPQ4 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
TRIM35Q9UPQ4 TEP1-201ENST00000262715 10695 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
TRIM35Q9UPQ4 AL031123.3-201ENST00000623345 1837 ntBASIC9.24□□□□□ -0.93
TRIM35Q9UPQ4 SH3PXD2A-202ENST00000355946 11245 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
TRIM35Q9UPQ4 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC9.24□□□□□ -0.93
TRIM35Q9UPQ4 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
TRIM35Q9UPQ4 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
TRIM35Q9UPQ4 CLIC5-201ENST00000185206 6023 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
TRIM35Q9UPQ4 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
TRIM35Q9UPQ4 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC9.23□□□□□ -0.93
TRIM35Q9UPQ4 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
TRIM35Q9UPQ4 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
TRIM35Q9UPQ4 OR4Q3-202ENST00000642117 2165 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
TRIM35Q9UPQ4 NUP155-201ENST00000231498 8143 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
TRIM35Q9UPQ4 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC9.23□□□□□ -0.93
TRIM35Q9UPQ4 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC9.23□□□□□ -0.93
TRIM35Q9UPQ4 AC102941.1-201ENST00000567616 1537 ntBASIC9.23□□□□□ -0.93
TRIM35Q9UPQ4 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
TRIM35Q9UPQ4 Y_RNA.81-201ENST00000362997 102 ntBASIC9.23□□□□□ -0.93
TRIM35Q9UPQ4 RNU6-216P-201ENST00000363282 104 ntBASIC9.23□□□□□ -0.93
TRIM35Q9UPQ4 RNU6-266P-201ENST00000364225 107 ntBASIC9.23□□□□□ -0.93
TRIM35Q9UPQ4 RNU6-1013P-201ENST00000384180 107 ntBASIC9.23□□□□□ -0.93
TRIM35Q9UPQ4 Y_RNA.785-201ENST00000384290 109 ntBASIC9.23□□□□□ -0.93
TRIM35Q9UPQ4 RNA5SP53-201ENST00000391299 120 ntBASIC9.23□□□□□ -0.93
TRIM35Q9UPQ4 IL6-203ENST00000401651 539 ntTSL 2 BASIC9.23□□□□□ -0.93
TRIM35Q9UPQ4 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
TRIM35Q9UPQ4 AC074085.1-201ENST00000413598 418 ntBASIC9.23□□□□□ -0.93
TRIM35Q9UPQ4 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC9.23□□□□□ -0.93
TRIM35Q9UPQ4 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
TRIM35Q9UPQ4 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
TRIM35Q9UPQ4 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC9.23□□□□□ -0.93
TRIM35Q9UPQ4 HMGB3P10-201ENST00000434734 572 ntBASIC9.23□□□□□ -0.93
TRIM35Q9UPQ4 AC234771.4-201ENST00000441416 730 ntBASIC9.23□□□□□ -0.93
TRIM35Q9UPQ4 DEFA11P-201ENST00000446470 261 ntBASIC9.23□□□□□ -0.93
TRIM35Q9UPQ4 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC9.23□□□□□ -0.93
TRIM35Q9UPQ4 AL157400.2-201ENST00000454174 563 ntTSL 2 BASIC9.23□□□□□ -0.93
TRIM35Q9UPQ4 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC9.23□□□□□ -0.93
TRIM35Q9UPQ4 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC9.23□□□□□ -0.93
TRIM35Q9UPQ4 BX323845.2-201ENST00000458382 234 ntBASIC9.23□□□□□ -0.93
TRIM35Q9UPQ4 RNU6-1132P-201ENST00000459214 107 ntBASIC9.23□□□□□ -0.93
TRIM35Q9UPQ4 RPS16P9-201ENST00000477220 427 ntBASIC9.23□□□□□ -0.93
TRIM35Q9UPQ4 AC092451.1-201ENST00000480211 153 ntBASIC9.23□□□□□ -0.93
TRIM35Q9UPQ4 AC013356.1-201ENST00000489027 564 ntBASIC9.23□□□□□ -0.93
TRIM35Q9UPQ4 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC9.23□□□□□ -0.93
TRIM35Q9UPQ4 RNU6-416P-201ENST00000516265 103 ntBASIC9.23□□□□□ -0.93
TRIM35Q9UPQ4 IGHVIII-25-1-201ENST00000522143 241 ntBASIC9.23□□□□□ -0.93
TRIM35Q9UPQ4 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC9.23□□□□□ -0.93
TRIM35Q9UPQ4 MIR3133-201ENST00000583157 78 ntBASIC9.23□□□□□ -0.93
TRIM35Q9UPQ4 MIR4428-201ENST00000584884 73 ntBASIC9.23□□□□□ -0.93
TRIM35Q9UPQ4 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
TRIM35Q9UPQ4 AC010605.1-201ENST00000597303 797 ntTSL 2 BASIC9.23□□□□□ -0.93
TRIM35Q9UPQ4 MIR6128-201ENST00000615528 109 ntBASIC9.23□□□□□ -0.93
TRIM35Q9UPQ4 FTX_2.1-201ENST00000618816 94 ntBASIC9.23□□□□□ -0.93
TRIM35Q9UPQ4 AC026108.1-201ENST00000635444 547 ntBASIC9.23□□□□□ -0.93
TRIM35Q9UPQ4 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
TRIM35Q9UPQ4 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
TRIM35Q9UPQ4 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC9.23□□□□□ -0.93
TRIM35Q9UPQ4 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC9.23□□□□□ -0.93
TRIM35Q9UPQ4 AC006020.1-201ENST00000420179 1854 ntBASIC9.23□□□□□ -0.93
TRIM35Q9UPQ4 AC079178.2-201ENST00000439323 1624 ntBASIC9.23□□□□□ -0.93
TRIM35Q9UPQ4 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC9.23□□□□□ -0.93
TRIM35Q9UPQ4 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
TRIM35Q9UPQ4 SLC26A9-202ENST00000367134 4616 ntTSL 5 BASIC9.23□□□□□ -0.93
TRIM35Q9UPQ4 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
TRIM35Q9UPQ4 SPTAN1-222ENST00000630804 7812 ntTSL 5 BASIC9.23□□□□□ -0.93
TRIM35Q9UPQ4 RBPJ-201ENST00000342295 5860 ntTSL 5 BASIC9.23□□□□□ -0.93
TRIM35Q9UPQ4 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC9.22□□□□□ -0.93
TRIM35Q9UPQ4 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
TRIM35Q9UPQ4 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
TRIM35Q9UPQ4 EPB41-201ENST00000343067 5956 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
TRIM35Q9UPQ4 SCAND2P-201ENST00000348993 8975 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
TRIM35Q9UPQ4 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
TRIM35Q9UPQ4 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
TRIM35Q9UPQ4 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
TRIM35Q9UPQ4 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
TRIM35Q9UPQ4 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC9.22□□□□□ -0.93
TRIM35Q9UPQ4 EML5-201ENST00000380664 5910 ntTSL 5 BASIC9.22□□□□□ -0.93
TRIM35Q9UPQ4 MFSD8-217ENST00000641178 4374 ntBASIC9.22□□□□□ -0.93
TRIM35Q9UPQ4 Y_RNA.255-201ENST00000364581 97 ntBASIC9.22□□□□□ -0.93
TRIM35Q9UPQ4 CUBN-201ENST00000377823 705 ntTSL 3 BASIC9.22□□□□□ -0.93
TRIM35Q9UPQ4 RNU6-1040P-201ENST00000383974 107 ntBASIC9.22□□□□□ -0.93
TRIM35Q9UPQ4 RNU2-9P-201ENST00000410194 145 ntBASIC9.22□□□□□ -0.93
TRIM35Q9UPQ4 AL451074.5-201ENST00000415894 435 ntBASIC9.22□□□□□ -0.93
TRIM35Q9UPQ4 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC9.22□□□□□ -0.93
TRIM35Q9UPQ4 GSTA6P-201ENST00000424144 582 ntBASIC9.22□□□□□ -0.93
TRIM35Q9UPQ4 RPL21P91-201ENST00000429231 479 ntBASIC9.22□□□□□ -0.93
TRIM35Q9UPQ4 RPS17P8-201ENST00000434525 335 ntBASIC9.22□□□□□ -0.93
TRIM35Q9UPQ4 AC073109.1-201ENST00000445066 978 ntBASIC9.22□□□□□ -0.93
TRIM35Q9UPQ4 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC9.22□□□□□ -0.93
TRIM35Q9UPQ4 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC9.22□□□□□ -0.93
TRIM35Q9UPQ4 RPL26P28-201ENST00000451325 435 ntBASIC9.22□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms