Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 AC008083.2-201ENST00000546707 476 ntBASIC4.54□□□□□ -1.68
CHRNA9Q9UGM1 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.54□□□□□ -1.68
CHRNA9Q9UGM1 AL049870.4-201ENST00000555741 486 ntBASIC4.54□□□□□ -1.68
CHRNA9Q9UGM1 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.54□□□□□ -1.68
CHRNA9Q9UGM1 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.54□□□□□ -1.68
CHRNA9Q9UGM1 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.54□□□□□ -1.68
CHRNA9Q9UGM1 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.54□□□□□ -1.68
CHRNA9Q9UGM1 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.54□□□□□ -1.68
CHRNA9Q9UGM1 AL049844.2-201ENST00000604280 628 ntBASIC4.54□□□□□ -1.68
CHRNA9Q9UGM1 AC090953.1-201ENST00000604305 1092 ntBASIC4.54□□□□□ -1.68
CHRNA9Q9UGM1 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.54□□□□□ -1.68
CHRNA9Q9UGM1 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC4.54□□□□□ -1.68
CHRNA9Q9UGM1 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CHRNA9Q9UGM1 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CHRNA9Q9UGM1 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CHRNA9Q9UGM1 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
CHRNA9Q9UGM1 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.54□□□□□ -1.68
CHRNA9Q9UGM1 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CHRNA9Q9UGM1 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CHRNA9Q9UGM1 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
CHRNA9Q9UGM1 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
CHRNA9Q9UGM1 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.53□□□□□ -1.68
CHRNA9Q9UGM1 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CHRNA9Q9UGM1 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CHRNA9Q9UGM1 AC068446.1-201ENST00000556425 1549 ntBASIC4.53□□□□□ -1.68
CHRNA9Q9UGM1 AC017002.4-201ENST00000604721 1525 ntBASIC4.53□□□□□ -1.68
CHRNA9Q9UGM1 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CHRNA9Q9UGM1 RNA5SP455-201ENST00000365190 119 ntBASIC4.53□□□□□ -1.68
CHRNA9Q9UGM1 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CHRNA9Q9UGM1 RNU6-31P-201ENST00000384388 108 ntBASIC4.53□□□□□ -1.68
CHRNA9Q9UGM1 RNU6-146P-201ENST00000384602 108 ntBASIC4.53□□□□□ -1.68
CHRNA9Q9UGM1 MIR765-201ENST00000390226 114 ntBASIC4.53□□□□□ -1.68
CHRNA9Q9UGM1 LRRC37BP1-201ENST00000398851 714 ntBASIC4.53□□□□□ -1.68
CHRNA9Q9UGM1 AL136116.2-201ENST00000404020 785 ntBASIC4.53□□□□□ -1.68
CHRNA9Q9UGM1 MIR1178-201ENST00000408396 91 ntBASIC4.53□□□□□ -1.68
CHRNA9Q9UGM1 RN7SKP213-201ENST00000410746 298 ntBASIC4.53□□□□□ -1.68
CHRNA9Q9UGM1 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.53□□□□□ -1.68
CHRNA9Q9UGM1 AL691447.1-201ENST00000419456 387 ntBASIC4.53□□□□□ -1.68
CHRNA9Q9UGM1 AC048351.1-201ENST00000420064 602 ntBASIC4.53□□□□□ -1.68
CHRNA9Q9UGM1 AL358176.3-201ENST00000420757 454 ntBASIC4.53□□□□□ -1.68
CHRNA9Q9UGM1 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CHRNA9Q9UGM1 RPL12P34-201ENST00000424532 479 ntBASIC4.53□□□□□ -1.68
CHRNA9Q9UGM1 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.53□□□□□ -1.68
CHRNA9Q9UGM1 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.53□□□□□ -1.68
CHRNA9Q9UGM1 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.53□□□□□ -1.68
CHRNA9Q9UGM1 RPL34P20-201ENST00000442771 351 ntBASIC4.53□□□□□ -1.68
CHRNA9Q9UGM1 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.53□□□□□ -1.68
CHRNA9Q9UGM1 AL691482.1-201ENST00000453255 87 ntBASIC4.53□□□□□ -1.68
CHRNA9Q9UGM1 RNU6-775P-201ENST00000459318 96 ntBASIC4.53□□□□□ -1.68
CHRNA9Q9UGM1 GYG1P1-201ENST00000460864 698 ntBASIC4.53□□□□□ -1.68
CHRNA9Q9UGM1 AC026348.1-201ENST00000462549 1053 ntBASIC4.53□□□□□ -1.68
CHRNA9Q9UGM1 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.53□□□□□ -1.68
CHRNA9Q9UGM1 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.53□□□□□ -1.68
CHRNA9Q9UGM1 RN7SL177P-201ENST00000476596 299 ntBASIC4.53□□□□□ -1.68
CHRNA9Q9UGM1 BX284632.1-201ENST00000478218 541 ntBASIC4.53□□□□□ -1.68
CHRNA9Q9UGM1 AC008953.1-201ENST00000497334 318 ntBASIC4.53□□□□□ -1.68
CHRNA9Q9UGM1 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.53□□□□□ -1.68
CHRNA9Q9UGM1 AC093763.2-201ENST00000505334 1223 ntBASIC4.53□□□□□ -1.68
CHRNA9Q9UGM1 HMGB1P47-201ENST00000511281 589 ntBASIC4.53□□□□□ -1.68
CHRNA9Q9UGM1 RNA5SP43-201ENST00000516559 110 ntBASIC4.53□□□□□ -1.68
CHRNA9Q9UGM1 AC027308.1-201ENST00000517993 110 ntBASIC4.53□□□□□ -1.68
CHRNA9Q9UGM1 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
CHRNA9Q9UGM1 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.53□□□□□ -1.68
CHRNA9Q9UGM1 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CHRNA9Q9UGM1 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CHRNA9Q9UGM1 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
CHRNA9Q9UGM1 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.53□□□□□ -1.68
CHRNA9Q9UGM1 AL049830.4-201ENST00000555149 351 ntBASIC4.53□□□□□ -1.68
CHRNA9Q9UGM1 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.53□□□□□ -1.68
CHRNA9Q9UGM1 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.53□□□□□ -1.68
CHRNA9Q9UGM1 MIR3936-201ENST00000584304 110 ntBASIC4.53□□□□□ -1.68
CHRNA9Q9UGM1 RN7SL435P-201ENST00000584418 282 ntBASIC4.53□□□□□ -1.68
CHRNA9Q9UGM1 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.53□□□□□ -1.68
CHRNA9Q9UGM1 EIF1P5-201ENST00000585002 234 ntBASIC4.53□□□□□ -1.68
CHRNA9Q9UGM1 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.53□□□□□ -1.68
CHRNA9Q9UGM1 AC090948.2-201ENST00000607363 564 ntBASIC4.53□□□□□ -1.68
CHRNA9Q9UGM1 AC093799.2-201ENST00000610062 578 ntBASIC4.53□□□□□ -1.68
CHRNA9Q9UGM1 AL627230.1-201ENST00000613077 211 ntBASIC4.53□□□□□ -1.68
CHRNA9Q9UGM1 AL591926.8-201ENST00000616876 211 ntBASIC4.53□□□□□ -1.68
CHRNA9Q9UGM1 AP003497.2-201ENST00000624220 967 ntBASIC4.53□□□□□ -1.68
CHRNA9Q9UGM1 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.53□□□□□ -1.68
CHRNA9Q9UGM1 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CHRNA9Q9UGM1 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CHRNA9Q9UGM1 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CHRNA9Q9UGM1 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.53□□□□□ -1.68
CHRNA9Q9UGM1 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.53□□□□□ -1.68
CHRNA9Q9UGM1 DDX18P4-201ENST00000511690 1966 ntBASIC4.53□□□□□ -1.68
CHRNA9Q9UGM1 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
CHRNA9Q9UGM1 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CHRNA9Q9UGM1 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.52□□□□□ -1.69
CHRNA9Q9UGM1 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.52□□□□□ -1.69
CHRNA9Q9UGM1 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.52□□□□□ -1.69
CHRNA9Q9UGM1 SNORA73.1-201ENST00000363107 205 ntBASIC4.52□□□□□ -1.69
CHRNA9Q9UGM1 RNA5SP507-201ENST00000363603 121 ntBASIC4.52□□□□□ -1.69
CHRNA9Q9UGM1 AC019155.1-201ENST00000382242 574 ntBASIC4.52□□□□□ -1.69
CHRNA9Q9UGM1 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.52□□□□□ -1.69
CHRNA9Q9UGM1 AC073136.2-201ENST00000417282 849 ntBASIC4.52□□□□□ -1.69
CHRNA9Q9UGM1 AC019050.1-201ENST00000418508 492 ntBASIC4.52□□□□□ -1.69
CHRNA9Q9UGM1 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.52□□□□□ -1.69
CHRNA9Q9UGM1 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms