Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC5.56□□□□□ -1.52
SALL1Q9NSC2 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC5.56□□□□□ -1.52
SALL1Q9NSC2 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
SALL1Q9NSC2 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC5.56□□□□□ -1.52
SALL1Q9NSC2 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.56□□□□□ -1.52
SALL1Q9NSC2 AC245389.2-201ENST00000616023 576 ntBASIC5.56□□□□□ -1.52
SALL1Q9NSC2 AC242843.1-201ENST00000618702 573 ntBASIC5.56□□□□□ -1.52
SALL1Q9NSC2 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SALL1Q9NSC2 AP001642.1-201ENST00000624727 2117 ntBASIC5.56□□□□□ -1.52
SALL1Q9NSC2 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SALL1Q9NSC2 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SALL1Q9NSC2 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SALL1Q9NSC2 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
SALL1Q9NSC2 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
SALL1Q9NSC2 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.56□□□□□ -1.52
SALL1Q9NSC2 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
SALL1Q9NSC2 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
SALL1Q9NSC2 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
SALL1Q9NSC2 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
SALL1Q9NSC2 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
SALL1Q9NSC2 AL445487.1-201ENST00000415694 1580 ntBASIC5.55□□□□□ -1.52
SALL1Q9NSC2 AC108467.2-201ENST00000617640 1597 ntBASIC5.55□□□□□ -1.52
SALL1Q9NSC2 IGKV7-3-201ENST00000357453 298 ntBASIC5.55□□□□□ -1.52
SALL1Q9NSC2 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
SALL1Q9NSC2 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
SALL1Q9NSC2 ISCUP1-201ENST00000454451 448 ntBASIC5.55□□□□□ -1.52
SALL1Q9NSC2 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC5.55□□□□□ -1.52
SALL1Q9NSC2 MTCO3P42-201ENST00000509488 518 ntBASIC5.55□□□□□ -1.52
SALL1Q9NSC2 AC015795.1-201ENST00000513669 327 ntBASIC5.55□□□□□ -1.52
SALL1Q9NSC2 MTCO3P39-201ENST00000514812 518 ntBASIC5.55□□□□□ -1.52
SALL1Q9NSC2 IGKV2D-10-201ENST00000520194 281 ntBASIC5.55□□□□□ -1.52
SALL1Q9NSC2 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.55□□□□□ -1.52
SALL1Q9NSC2 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.55□□□□□ -1.52
SALL1Q9NSC2 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.55□□□□□ -1.52
SALL1Q9NSC2 AL354950.1-201ENST00000614150 568 ntBASIC5.55□□□□□ -1.52
SALL1Q9NSC2 AL035461.2-201ENST00000619201 524 ntBASIC5.55□□□□□ -1.52
SALL1Q9NSC2 AP005019.3-201ENST00000620418 560 ntBASIC5.55□□□□□ -1.52
SALL1Q9NSC2 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
SALL1Q9NSC2 AL359922.3-201ENST00000624779 1670 ntBASIC5.55□□□□□ -1.52
SALL1Q9NSC2 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.55□□□□□ -1.52
SALL1Q9NSC2 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SALL1Q9NSC2 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC5.55□□□□□ -1.52
SALL1Q9NSC2 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.55□□□□□ -1.52
SALL1Q9NSC2 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SALL1Q9NSC2 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
SALL1Q9NSC2 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SALL1Q9NSC2 AC108751.5-201ENST00000492880 1336 ntBASIC5.55□□□□□ -1.52
SALL1Q9NSC2 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SALL1Q9NSC2 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.55□□□□□ -1.52
SALL1Q9NSC2 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SALL1Q9NSC2 AL121839.2-201ENST00000565058 6943 ntBASIC5.54□□□□□ -1.52
SALL1Q9NSC2 RNA5SP509-201ENST00000364577 119 ntBASIC5.54□□□□□ -1.52
SALL1Q9NSC2 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SALL1Q9NSC2 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC5.54□□□□□ -1.52
SALL1Q9NSC2 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SALL1Q9NSC2 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC5.54□□□□□ -1.52
SALL1Q9NSC2 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.54□□□□□ -1.52
SALL1Q9NSC2 TRIM60P9Y-201ENST00000438459 816 ntBASIC5.54□□□□□ -1.52
SALL1Q9NSC2 TRIM60P11Y-201ENST00000445313 801 ntBASIC5.54□□□□□ -1.52
SALL1Q9NSC2 CYCSP34-201ENST00000458172 304 ntBASIC5.54□□□□□ -1.52
SALL1Q9NSC2 AC011276.1-201ENST00000469688 323 ntBASIC5.54□□□□□ -1.52
SALL1Q9NSC2 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.54□□□□□ -1.52
SALL1Q9NSC2 AC015912.2-201ENST00000571053 181 ntBASIC5.54□□□□□ -1.52
SALL1Q9NSC2 AC006338.2-201ENST00000616864 791 ntBASIC5.54□□□□□ -1.52
SALL1Q9NSC2 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SALL1Q9NSC2 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
SALL1Q9NSC2 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.54□□□□□ -1.52
SALL1Q9NSC2 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SALL1Q9NSC2 CCT8P1-201ENST00000413611 1657 ntBASIC5.54□□□□□ -1.52
SALL1Q9NSC2 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
SALL1Q9NSC2 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.54□□□□□ -1.52
SALL1Q9NSC2 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.54□□□□□ -1.52
SALL1Q9NSC2 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.54□□□□□ -1.52
SALL1Q9NSC2 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.54□□□□□ -1.52
SALL1Q9NSC2 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
SALL1Q9NSC2 GAPDHP49-201ENST00000421421 961 ntBASIC5.53□□□□□ -1.52
SALL1Q9NSC2 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.53□□□□□ -1.52
SALL1Q9NSC2 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.53□□□□□ -1.52
SALL1Q9NSC2 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC5.53□□□□□ -1.52
SALL1Q9NSC2 AC073143.1-201ENST00000436316 395 ntBASIC5.53□□□□□ -1.52
SALL1Q9NSC2 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.53□□□□□ -1.52
SALL1Q9NSC2 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.53□□□□□ -1.52
SALL1Q9NSC2 AC112206.1-201ENST00000468416 477 ntBASIC5.53□□□□□ -1.52
SALL1Q9NSC2 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SALL1Q9NSC2 HMGB3P14-201ENST00000494195 599 ntBASIC5.53□□□□□ -1.52
SALL1Q9NSC2 TRIM36-IT1-201ENST00000503723 881 ntBASIC5.53□□□□□ -1.52
SALL1Q9NSC2 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.53□□□□□ -1.52
SALL1Q9NSC2 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
SALL1Q9NSC2 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.53□□□□□ -1.52
SALL1Q9NSC2 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC5.53□□□□□ -1.52
SALL1Q9NSC2 AC090948.1-201ENST00000607464 549 ntBASIC5.53□□□□□ -1.52
SALL1Q9NSC2 AC005962.2-201ENST00000611427 652 ntBASIC5.53□□□□□ -1.52
SALL1Q9NSC2 AL121890.3-201ENST00000618494 516 ntBASIC5.53□□□□□ -1.52
SALL1Q9NSC2 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
SALL1Q9NSC2 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5.53□□□□□ -1.52
SALL1Q9NSC2 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SALL1Q9NSC2 AC006484.1-201ENST00000435086 1884 ntBASIC5.53□□□□□ -1.52
SALL1Q9NSC2 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SALL1Q9NSC2 OR51H2P-202ENST00000641424 3046 ntBASIC5.53□□□□□ -1.52
SALL1Q9NSC2 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms