Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 Y_RNA.710-201ENST00000516975 110 ntBASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 AC118273.2-201ENST00000532092 465 ntBASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 RPA2P3-201ENST00000533268 770 ntBASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 AL049870.4-201ENST00000555741 486 ntBASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 DPPA2P4-201ENST00000563717 878 ntBASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 BGLT3-201ENST00000564523 994 ntBASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 MIR3154-201ENST00000577829 84 ntBASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 IMMP1LP1-201ENST00000605170 488 ntBASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 uc_338.31-201ENST00000615595 186 ntBASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 AC018628.1-201ENST00000624147 3819 ntBASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 OR5H6-203ENST00000642105 978 ntBASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 HDAC1P2-201ENST00000453661 1398 ntBASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SEC61A2Q9H9S3 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SEC61A2Q9H9S3 AC239868.2-201ENST00000564237 4527 ntBASIC5.49□□□□□ -1.53
SEC61A2Q9H9S3 AP002512.4-202ENST00000641599 4530 ntBASIC5.49□□□□□ -1.53
SEC61A2Q9H9S3 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
SEC61A2Q9H9S3 AC140134.1-201ENST00000511830 3544 ntBASIC5.49□□□□□ -1.53
SEC61A2Q9H9S3 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SEC61A2Q9H9S3 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
SEC61A2Q9H9S3 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.49□□□□□ -1.53
SEC61A2Q9H9S3 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SEC61A2Q9H9S3 AC092692.1-201ENST00000623625 2595 ntBASIC5.49□□□□□ -1.53
SEC61A2Q9H9S3 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
SEC61A2Q9H9S3 AC092070.2-203ENST00000598377 3644 ntBASIC5.49□□□□□ -1.53
SEC61A2Q9H9S3 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SEC61A2Q9H9S3 AC016716.1-201ENST00000265882 708 ntBASIC5.49□□□□□ -1.53
SEC61A2Q9H9S3 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SEC61A2Q9H9S3 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SEC61A2Q9H9S3 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SEC61A2Q9H9S3 RNU1-65P-201ENST00000363919 148 ntBASIC5.49□□□□□ -1.53
SEC61A2Q9H9S3 SNORA43.1-201ENST00000364863 140 ntBASIC5.49□□□□□ -1.53
SEC61A2Q9H9S3 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.49□□□□□ -1.53
SEC61A2Q9H9S3 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SEC61A2Q9H9S3 RNU6-259P-201ENST00000383999 107 ntBASIC5.49□□□□□ -1.53
SEC61A2Q9H9S3 Y_RNA.554-201ENST00000384672 102 ntBASIC5.49□□□□□ -1.53
SEC61A2Q9H9S3 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SEC61A2Q9H9S3 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.49□□□□□ -1.53
SEC61A2Q9H9S3 MTCO3P31-201ENST00000405526 789 ntBASIC5.49□□□□□ -1.53
SEC61A2Q9H9S3 RN7SKP108-201ENST00000411367 328 ntBASIC5.49□□□□□ -1.53
SEC61A2Q9H9S3 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.49□□□□□ -1.53
SEC61A2Q9H9S3 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.49□□□□□ -1.53
SEC61A2Q9H9S3 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC5.49□□□□□ -1.53
SEC61A2Q9H9S3 RPA2P2-201ENST00000419698 796 ntBASIC5.49□□□□□ -1.53
SEC61A2Q9H9S3 RPL7AP14-201ENST00000424041 802 ntBASIC5.49□□□□□ -1.53
SEC61A2Q9H9S3 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SEC61A2Q9H9S3 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.49□□□□□ -1.53
SEC61A2Q9H9S3 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC5.49□□□□□ -1.53
SEC61A2Q9H9S3 AL645936.1-201ENST00000441979 518 ntBASIC5.49□□□□□ -1.53
SEC61A2Q9H9S3 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC5.49□□□□□ -1.53
SEC61A2Q9H9S3 RPS26P30-201ENST00000443431 335 ntBASIC5.49□□□□□ -1.53
SEC61A2Q9H9S3 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.49□□□□□ -1.53
SEC61A2Q9H9S3 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.49□□□□□ -1.53
SEC61A2Q9H9S3 CALM1P2-201ENST00000452941 448 ntBASIC5.49□□□□□ -1.53
SEC61A2Q9H9S3 SSXP1-201ENST00000453640 473 ntBASIC5.49□□□□□ -1.53
SEC61A2Q9H9S3 AC112187.1-201ENST00000455837 479 ntBASIC5.49□□□□□ -1.53
SEC61A2Q9H9S3 MTND1P16-201ENST00000465177 898 ntBASIC5.49□□□□□ -1.53
SEC61A2Q9H9S3 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC5.49□□□□□ -1.53
SEC61A2Q9H9S3 AC041039.1-201ENST00000485656 536 ntBASIC5.49□□□□□ -1.53
SEC61A2Q9H9S3 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC5.49□□□□□ -1.53
SEC61A2Q9H9S3 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC5.49□□□□□ -1.53
SEC61A2Q9H9S3 SNX18P24-201ENST00000505249 671 ntBASIC5.49□□□□□ -1.53
SEC61A2Q9H9S3 AC098799.2-201ENST00000509466 868 ntBASIC5.49□□□□□ -1.53
SEC61A2Q9H9S3 KHDC1P1-201ENST00000511053 508 ntBASIC5.49□□□□□ -1.53
SEC61A2Q9H9S3 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC5.49□□□□□ -1.53
SEC61A2Q9H9S3 AC114781.4-201ENST00000513707 639 ntBASIC5.49□□□□□ -1.53
SEC61A2Q9H9S3 RNU6-506P-201ENST00000516553 94 ntBASIC5.49□□□□□ -1.53
SEC61A2Q9H9S3 AC124293.1-201ENST00000530034 493 ntBASIC5.49□□□□□ -1.53
SEC61A2Q9H9S3 AC024405.1-201ENST00000532521 1042 ntBASIC5.49□□□□□ -1.53
SEC61A2Q9H9S3 NTS-203ENST00000551529 801 ntTSL 3 BASIC5.49□□□□□ -1.53
SEC61A2Q9H9S3 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.49□□□□□ -1.53
SEC61A2Q9H9S3 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC5.49□□□□□ -1.53
SEC61A2Q9H9S3 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.49□□□□□ -1.53
SEC61A2Q9H9S3 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC5.49□□□□□ -1.53
SEC61A2Q9H9S3 RN7SL230P-201ENST00000580835 303 ntBASIC5.49□□□□□ -1.53
SEC61A2Q9H9S3 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC5.49□□□□□ -1.53
SEC61A2Q9H9S3 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.49□□□□□ -1.53
SEC61A2Q9H9S3 DYNLL1P1-201ENST00000595442 269 ntBASIC5.49□□□□□ -1.53
SEC61A2Q9H9S3 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.49□□□□□ -1.53
SEC61A2Q9H9S3 AC112230.1-201ENST00000604342 547 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms