Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC3.52□□□□□ -1.85
AP1S3Q96PC3 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC3.52□□□□□ -1.85
AP1S3Q96PC3 AC105254.2-201ENST00000603636 436 ntBASIC3.52□□□□□ -1.85
AP1S3Q96PC3 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.52□□□□□ -1.85
AP1S3Q96PC3 RNA5SP440-201ENST00000612665 119 ntBASIC3.52□□□□□ -1.85
AP1S3Q96PC3 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC3.52□□□□□ -1.85
AP1S3Q96PC3 WWOX-217ENST00000620008 450 ntTSL 2 BASIC3.52□□□□□ -1.85
AP1S3Q96PC3 MIR6837-201ENST00000620884 64 ntBASIC3.52□□□□□ -1.85
AP1S3Q96PC3 AC015804.1-201ENST00000622935 435 ntBASIC3.52□□□□□ -1.85
AP1S3Q96PC3 AP006248.2-201ENST00000623309 592 ntBASIC3.52□□□□□ -1.85
AP1S3Q96PC3 AL353662.3-201ENST00000625131 237 ntBASIC3.52□□□□□ -1.85
AP1S3Q96PC3 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
AP1S3Q96PC3 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
AP1S3Q96PC3 VPS35P1-201ENST00000563400 1518 ntBASIC3.52□□□□□ -1.85
AP1S3Q96PC3 AP001002.1-201ENST00000625148 1513 ntBASIC3.52□□□□□ -1.85
AP1S3Q96PC3 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
AP1S3Q96PC3 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
AP1S3Q96PC3 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
AP1S3Q96PC3 MAPK10-373ENST00000641983 6772 ntBASIC3.52□□□□□ -1.85
AP1S3Q96PC3 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
AP1S3Q96PC3 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC3.52□□□□□ -1.85
AP1S3Q96PC3 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
AP1S3Q96PC3 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
AP1S3Q96PC3 AC011493.1-201ENST00000596753 1632 ntBASIC3.52□□□□□ -1.85
AP1S3Q96PC3 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
AP1S3Q96PC3 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
AP1S3Q96PC3 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
AP1S3Q96PC3 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
AP1S3Q96PC3 CASC19-281ENST00000642118 1554 ntBASIC3.51□□□□□ -1.85
AP1S3Q96PC3 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
AP1S3Q96PC3 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
AP1S3Q96PC3 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
AP1S3Q96PC3 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC3.51□□□□□ -1.85
AP1S3Q96PC3 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC3.51□□□□□ -1.85
AP1S3Q96PC3 RN7SKP293-201ENST00000411389 296 ntBASIC3.51□□□□□ -1.85
AP1S3Q96PC3 TRIM60P17-201ENST00000415181 719 ntBASIC3.51□□□□□ -1.85
AP1S3Q96PC3 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
AP1S3Q96PC3 HNRNPA3P4-201ENST00000427514 803 ntBASIC3.51□□□□□ -1.85
AP1S3Q96PC3 MTCO1P51-201ENST00000427672 1060 ntBASIC3.51□□□□□ -1.85
AP1S3Q96PC3 RPS29P14-201ENST00000431518 171 ntBASIC3.51□□□□□ -1.85
AP1S3Q96PC3 YWHAEP5-201ENST00000431545 765 ntBASIC3.51□□□□□ -1.85
AP1S3Q96PC3 AL353597.2-202ENST00000434901 373 ntBASIC3.51□□□□□ -1.85
AP1S3Q96PC3 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC3.51□□□□□ -1.85
AP1S3Q96PC3 AL161636.2-201ENST00000445179 927 ntBASIC3.51□□□□□ -1.85
AP1S3Q96PC3 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.51□□□□□ -1.85
AP1S3Q96PC3 RPS26P41-201ENST00000450370 284 ntBASIC3.51□□□□□ -1.85
AP1S3Q96PC3 AC239809.1-201ENST00000450470 217 ntBASIC3.51□□□□□ -1.85
AP1S3Q96PC3 SCARNA10-201ENST00000459255 330 ntBASIC3.51□□□□□ -1.85
AP1S3Q96PC3 NDUFA5P5-201ENST00000468361 342 ntBASIC3.51□□□□□ -1.85
AP1S3Q96PC3 RN7SL727P-201ENST00000482164 296 ntBASIC3.51□□□□□ -1.85
AP1S3Q96PC3 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC3.51□□□□□ -1.85
AP1S3Q96PC3 COX6B1P5-201ENST00000509843 249 ntBASIC3.51□□□□□ -1.85
AP1S3Q96PC3 SSX6-203ENST00000509958 336 ntTSL 3 BASIC3.51□□□□□ -1.85
AP1S3Q96PC3 AC018797.3-201ENST00000513388 1241 ntBASIC3.51□□□□□ -1.85
AP1S3Q96PC3 RN7SKP70-201ENST00000516655 271 ntBASIC3.51□□□□□ -1.85
AP1S3Q96PC3 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC3.51□□□□□ -1.85
AP1S3Q96PC3 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC3.51□□□□□ -1.85
AP1S3Q96PC3 AC026688.1-201ENST00000520639 1168 ntBASIC3.51□□□□□ -1.85
AP1S3Q96PC3 MAL2-208ENST00000523307 556 ntTSL 4 BASIC3.51□□□□□ -1.85
AP1S3Q96PC3 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC3.51□□□□□ -1.85
AP1S3Q96PC3 AC100770.1-201ENST00000532310 322 ntBASIC3.51□□□□□ -1.85
AP1S3Q96PC3 OR11J2P-201ENST00000555298 907 ntBASIC3.51□□□□□ -1.85
AP1S3Q96PC3 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC3.51□□□□□ -1.85
AP1S3Q96PC3 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
AP1S3Q96PC3 MIR744-201ENST00000578242 98 ntBASIC3.51□□□□□ -1.85
AP1S3Q96PC3 AC005726.4-201ENST00000582858 458 ntBASIC3.51□□□□□ -1.85
AP1S3Q96PC3 AC023509.5-201ENST00000617434 807 ntBASIC3.51□□□□□ -1.85
AP1S3Q96PC3 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.51□□□□□ -1.85
AP1S3Q96PC3 AC127024.6-201ENST00000621598 424 ntBASIC3.51□□□□□ -1.85
AP1S3Q96PC3 AC087821.1-201ENST00000623639 567 ntBASIC3.51□□□□□ -1.85
AP1S3Q96PC3 MIR6715B-201ENST00000637172 77 ntBASIC3.51□□□□□ -1.85
AP1S3Q96PC3 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
AP1S3Q96PC3 A2MP1-204ENST00000566278 4130 ntBASIC3.51□□□□□ -1.85
AP1S3Q96PC3 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC3.51□□□□□ -1.85
AP1S3Q96PC3 IQCB2P-201ENST00000401788 1633 ntBASIC3.51□□□□□ -1.85
AP1S3Q96PC3 AC007390.2-201ENST00000606229 3803 ntBASIC3.51□□□□□ -1.85
AP1S3Q96PC3 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
AP1S3Q96PC3 EEF1A1P36-201ENST00000427807 1351 ntBASIC3.51□□□□□ -1.85
AP1S3Q96PC3 AC006971.1-201ENST00000407916 4486 ntBASIC3.5□□□□□ -1.85
AP1S3Q96PC3 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.5□□□□□ -1.85
AP1S3Q96PC3 CYP4Z2P-201ENST00000423332 1512 ntBASIC3.5□□□□□ -1.85
AP1S3Q96PC3 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
AP1S3Q96PC3 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
AP1S3Q96PC3 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
AP1S3Q96PC3 NXF4-202ENST00000416098 1465 ntBASIC3.5□□□□□ -1.85
AP1S3Q96PC3 TMSB4XP4-201ENST00000323496 618 ntBASIC3.5□□□□□ -1.85
AP1S3Q96PC3 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
AP1S3Q96PC3 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC3.5□□□□□ -1.85
AP1S3Q96PC3 AC104297.1-201ENST00000393779 870 ntBASIC3.5□□□□□ -1.85
AP1S3Q96PC3 MIR921-201ENST00000401133 56 ntBASIC3.5□□□□□ -1.85
AP1S3Q96PC3 ZNF603P-201ENST00000405613 487 ntBASIC3.5□□□□□ -1.85
AP1S3Q96PC3 RNA5SP178-201ENST00000410380 128 ntBASIC3.5□□□□□ -1.85
AP1S3Q96PC3 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
AP1S3Q96PC3 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC3.5□□□□□ -1.85
AP1S3Q96PC3 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC3.5□□□□□ -1.85
AP1S3Q96PC3 LINC00993-201ENST00000420453 540 ntBASIC3.5□□□□□ -1.85
AP1S3Q96PC3 OR2AM1P-201ENST00000422137 422 ntBASIC3.5□□□□□ -1.85
AP1S3Q96PC3 RWDD4P2-201ENST00000426392 563 ntBASIC3.5□□□□□ -1.85
AP1S3Q96PC3 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC3.5□□□□□ -1.85
AP1S3Q96PC3 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms