Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
AP3S1Q92572 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.06□□□□□ -1.76
AP3S1Q92572 RN7SKP124-201ENST00000364730 341 ntBASIC4.06□□□□□ -1.76
AP3S1Q92572 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.06□□□□□ -1.76
AP3S1Q92572 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
AP3S1Q92572 AL603766.1-201ENST00000407763 664 ntBASIC4.06□□□□□ -1.76
AP3S1Q92572 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.06□□□□□ -1.76
AP3S1Q92572 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.06□□□□□ -1.76
AP3S1Q92572 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.06□□□□□ -1.76
AP3S1Q92572 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.06□□□□□ -1.76
AP3S1Q92572 JKAMPP1-201ENST00000413804 919 ntBASIC4.06□□□□□ -1.76
AP3S1Q92572 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.06□□□□□ -1.76
AP3S1Q92572 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.06□□□□□ -1.76
AP3S1Q92572 GLUD1P9-201ENST00000420997 1173 ntBASIC4.06□□□□□ -1.76
AP3S1Q92572 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.06□□□□□ -1.76
AP3S1Q92572 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC4.06□□□□□ -1.76
AP3S1Q92572 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC4.06□□□□□ -1.76
AP3S1Q92572 AC092905.1-201ENST00000467527 949 ntBASIC4.06□□□□□ -1.76
AP3S1Q92572 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC4.06□□□□□ -1.76
AP3S1Q92572 SYT14P1-201ENST00000481459 721 ntBASIC4.06□□□□□ -1.76
AP3S1Q92572 AC093270.2-201ENST00000486157 792 ntBASIC4.06□□□□□ -1.76
AP3S1Q92572 AC006499.4-201ENST00000510947 694 ntBASIC4.06□□□□□ -1.76
AP3S1Q92572 RNU1-6P-201ENST00000516290 144 ntBASIC4.06□□□□□ -1.76
AP3S1Q92572 RNA5SP43-201ENST00000516559 110 ntBASIC4.06□□□□□ -1.76
AP3S1Q92572 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.06□□□□□ -1.76
AP3S1Q92572 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
AP3S1Q92572 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC4.06□□□□□ -1.76
AP3S1Q92572 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.06□□□□□ -1.76
AP3S1Q92572 FO393422.1-201ENST00000603908 708 ntBASIC4.06□□□□□ -1.76
AP3S1Q92572 OR7A19P-201ENST00000608051 733 ntBASIC4.06□□□□□ -1.76
AP3S1Q92572 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
AP3S1Q92572 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
AP3S1Q92572 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.06□□□□□ -1.76
AP3S1Q92572 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
AP3S1Q92572 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
AP3S1Q92572 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
AP3S1Q92572 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
AP3S1Q92572 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.06□□□□□ -1.76
AP3S1Q92572 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
AP3S1Q92572 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
AP3S1Q92572 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.06□□□□□ -1.76
AP3S1Q92572 AL133412.1-201ENST00000380194 2992 ntBASIC4.05□□□□□ -1.76
AP3S1Q92572 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
AP3S1Q92572 AL592437.2-201ENST00000421655 2434 ntBASIC4.05□□□□□ -1.76
AP3S1Q92572 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
AP3S1Q92572 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.05□□□□□ -1.76
AP3S1Q92572 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
AP3S1Q92572 OR11H5P-202ENST00000641612 1325 ntBASIC4.05□□□□□ -1.76
AP3S1Q92572 USP9YP4-201ENST00000424401 1745 ntBASIC4.05□□□□□ -1.76
AP3S1Q92572 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
AP3S1Q92572 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
AP3S1Q92572 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
AP3S1Q92572 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.05□□□□□ -1.76
AP3S1Q92572 RN7SKP126-201ENST00000411143 300 ntBASIC4.05□□□□□ -1.76
AP3S1Q92572 NFU1P1-201ENST00000413128 774 ntBASIC4.05□□□□□ -1.76
AP3S1Q92572 AL450992.3-201ENST00000413192 568 ntBASIC4.05□□□□□ -1.76
AP3S1Q92572 RPS23P10-201ENST00000416185 486 ntBASIC4.05□□□□□ -1.76
AP3S1Q92572 AF186996.5-201ENST00000418098 904 ntBASIC4.05□□□□□ -1.76
AP3S1Q92572 MTND2P2-201ENST00000434633 945 ntBASIC4.05□□□□□ -1.76
AP3S1Q92572 AC110602.1-201ENST00000437414 318 ntBASIC4.05□□□□□ -1.76
AP3S1Q92572 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.05□□□□□ -1.76
AP3S1Q92572 AL137845.2-201ENST00000444292 988 ntBASIC4.05□□□□□ -1.76
AP3S1Q92572 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.05□□□□□ -1.76
AP3S1Q92572 CLIC4P1-201ENST00000453177 535 ntBASIC4.05□□□□□ -1.76
AP3S1Q92572 AC097484.1-201ENST00000471148 389 ntBASIC4.05□□□□□ -1.76
AP3S1Q92572 RPL23AP2-201ENST00000471227 466 ntBASIC4.05□□□□□ -1.76
AP3S1Q92572 AC098799.3-201ENST00000506095 438 ntBASIC4.05□□□□□ -1.76
AP3S1Q92572 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.05□□□□□ -1.76
AP3S1Q92572 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.05□□□□□ -1.76
AP3S1Q92572 AC090281.1-201ENST00000523019 276 ntBASIC4.05□□□□□ -1.76
AP3S1Q92572 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.05□□□□□ -1.76
AP3S1Q92572 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC4.05□□□□□ -1.76
AP3S1Q92572 AL139286.1-201ENST00000604465 483 ntBASIC4.05□□□□□ -1.76
AP3S1Q92572 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC4.05□□□□□ -1.76
AP3S1Q92572 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
AP3S1Q92572 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.05□□□□□ -1.76
AP3S1Q92572 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.05□□□□□ -1.76
AP3S1Q92572 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.05□□□□□ -1.76
AP3S1Q92572 AL683826.1-201ENST00000624104 627 ntBASIC4.05□□□□□ -1.76
AP3S1Q92572 CR381572.2-201ENST00000624852 397 ntBASIC4.05□□□□□ -1.76
AP3S1Q92572 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.05□□□□□ -1.76
AP3S1Q92572 PNPT1P2-201ENST00000456768 2050 ntBASIC4.05□□□□□ -1.76
AP3S1Q92572 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
AP3S1Q92572 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
AP3S1Q92572 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
AP3S1Q92572 AC068254.2-201ENST00000623938 3577 ntBASIC4.04□□□□□ -1.76
AP3S1Q92572 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
AP3S1Q92572 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
AP3S1Q92572 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
AP3S1Q92572 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
AP3S1Q92572 RNA5SP502-201ENST00000362694 119 ntBASIC4.04□□□□□ -1.76
AP3S1Q92572 RN7SKP257-201ENST00000364525 309 ntBASIC4.04□□□□□ -1.76
AP3S1Q92572 RN7SKP275-201ENST00000364626 301 ntBASIC4.04□□□□□ -1.76
AP3S1Q92572 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.04□□□□□ -1.76
AP3S1Q92572 AL136131.1-201ENST00000406079 803 ntBASIC4.04□□□□□ -1.76
AP3S1Q92572 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
AP3S1Q92572 RN7SKP167-201ENST00000411047 285 ntBASIC4.04□□□□□ -1.76
AP3S1Q92572 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.04□□□□□ -1.76
AP3S1Q92572 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.04□□□□□ -1.76
AP3S1Q92572 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms