Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
SHROOM3Q8TF72 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SHROOM3Q8TF72 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SHROOM3Q8TF72 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SHROOM3Q8TF72 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.75□□□□□ -1.65
SHROOM3Q8TF72 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SHROOM3Q8TF72 AL451062.2-201ENST00000427515 271 ntBASIC4.74□□□□□ -1.65
SHROOM3Q8TF72 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.74□□□□□ -1.65
SHROOM3Q8TF72 Y_RNA.719-201ENST00000517156 106 ntBASIC4.74□□□□□ -1.65
SHROOM3Q8TF72 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.74□□□□□ -1.65
SHROOM3Q8TF72 SOX5P1-201ENST00000524155 1127 ntBASIC4.74□□□□□ -1.65
SHROOM3Q8TF72 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SHROOM3Q8TF72 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.74□□□□□ -1.65
SHROOM3Q8TF72 AC020915.5-201ENST00000596836 964 ntBASIC4.74□□□□□ -1.65
SHROOM3Q8TF72 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
SHROOM3Q8TF72 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.74□□□□□ -1.65
SHROOM3Q8TF72 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.74□□□□□ -1.65
SHROOM3Q8TF72 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SHROOM3Q8TF72 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
SHROOM3Q8TF72 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
SHROOM3Q8TF72 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SHROOM3Q8TF72 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC4.74□□□□□ -1.65
SHROOM3Q8TF72 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
SHROOM3Q8TF72 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.74□□□□□ -1.65
SHROOM3Q8TF72 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SHROOM3Q8TF72 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
SHROOM3Q8TF72 SNORA71.2-201ENST00000364941 134 ntBASIC4.74□□□□□ -1.65
SHROOM3Q8TF72 SNORA70F-201ENST00000384142 135 ntBASIC4.74□□□□□ -1.65
SHROOM3Q8TF72 RNU1-13P-201ENST00000384499 162 ntBASIC4.74□□□□□ -1.65
SHROOM3Q8TF72 AL139039.2-201ENST00000407436 479 ntBASIC4.74□□□□□ -1.65
SHROOM3Q8TF72 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.74□□□□□ -1.65
SHROOM3Q8TF72 RN7SKP167-201ENST00000411047 285 ntBASIC4.74□□□□□ -1.65
SHROOM3Q8TF72 YWHAZP2-201ENST00000440317 728 ntBASIC4.74□□□□□ -1.65
SHROOM3Q8TF72 AC114755.5-201ENST00000447760 831 ntBASIC4.74□□□□□ -1.65
SHROOM3Q8TF72 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.74□□□□□ -1.65
SHROOM3Q8TF72 AC108463.1-201ENST00000450258 347 ntBASIC4.74□□□□□ -1.65
SHROOM3Q8TF72 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC4.74□□□□□ -1.65
SHROOM3Q8TF72 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.74□□□□□ -1.65
SHROOM3Q8TF72 RPL12P20-201ENST00000475538 479 ntBASIC4.74□□□□□ -1.65
SHROOM3Q8TF72 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.74□□□□□ -1.65
SHROOM3Q8TF72 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.74□□□□□ -1.65
SHROOM3Q8TF72 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.74□□□□□ -1.65
SHROOM3Q8TF72 BGLT3-201ENST00000564523 994 ntBASIC4.74□□□□□ -1.65
SHROOM3Q8TF72 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SHROOM3Q8TF72 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.74□□□□□ -1.65
SHROOM3Q8TF72 MIR6716-201ENST00000613413 80 ntBASIC4.74□□□□□ -1.65
SHROOM3Q8TF72 AC006133.1-201ENST00000617106 264 ntBASIC4.74□□□□□ -1.65
SHROOM3Q8TF72 AC034229.5-201ENST00000624258 185 ntBASIC4.74□□□□□ -1.65
SHROOM3Q8TF72 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SHROOM3Q8TF72 AP001642.1-201ENST00000624727 2117 ntBASIC4.74□□□□□ -1.65
SHROOM3Q8TF72 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.74□□□□□ -1.65
SHROOM3Q8TF72 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SHROOM3Q8TF72 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
SHROOM3Q8TF72 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
SHROOM3Q8TF72 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SHROOM3Q8TF72 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
SHROOM3Q8TF72 RN7SKP186-201ENST00000365371 303 ntBASIC4.73□□□□□ -1.65
SHROOM3Q8TF72 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
SHROOM3Q8TF72 RPL36AP10-201ENST00000421785 322 ntBASIC4.73□□□□□ -1.65
SHROOM3Q8TF72 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.73□□□□□ -1.65
SHROOM3Q8TF72 RPL23AP93-201ENST00000440847 484 ntBASIC4.73□□□□□ -1.65
SHROOM3Q8TF72 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.73□□□□□ -1.65
SHROOM3Q8TF72 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.73□□□□□ -1.65
SHROOM3Q8TF72 RNA5SP446-201ENST00000515955 82 ntBASIC4.73□□□□□ -1.65
SHROOM3Q8TF72 MIR3936-201ENST00000584304 110 ntBASIC4.73□□□□□ -1.65
SHROOM3Q8TF72 MIR3138-201ENST00000585238 82 ntBASIC4.73□□□□□ -1.65
SHROOM3Q8TF72 AC093227.2-201ENST00000589357 285 ntBASIC4.73□□□□□ -1.65
SHROOM3Q8TF72 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SHROOM3Q8TF72 OR8B1P-202ENST00000641132 1178 ntBASIC4.73□□□□□ -1.65
SHROOM3Q8TF72 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC4.73□□□□□ -1.65
SHROOM3Q8TF72 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SHROOM3Q8TF72 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.73□□□□□ -1.65
SHROOM3Q8TF72 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SHROOM3Q8TF72 SNORD46.1-201ENST00000364139 104 ntBASIC4.73□□□□□ -1.65
SHROOM3Q8TF72 AL592291.1-201ENST00000403830 352 ntBASIC4.73□□□□□ -1.65
SHROOM3Q8TF72 AL359643.1-201ENST00000404109 423 ntBASIC4.73□□□□□ -1.65
SHROOM3Q8TF72 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.73□□□□□ -1.65
SHROOM3Q8TF72 AC023141.6-201ENST00000429418 337 ntBASIC4.73□□□□□ -1.65
SHROOM3Q8TF72 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.73□□□□□ -1.65
SHROOM3Q8TF72 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.73□□□□□ -1.65
SHROOM3Q8TF72 RPL36AP15-201ENST00000444514 266 ntBASIC4.73□□□□□ -1.65
SHROOM3Q8TF72 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SHROOM3Q8TF72 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.73□□□□□ -1.65
SHROOM3Q8TF72 NDUFB4P12-201ENST00000513465 390 ntBASIC4.73□□□□□ -1.65
SHROOM3Q8TF72 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
SHROOM3Q8TF72 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.73□□□□□ -1.65
SHROOM3Q8TF72 OR7A19P-201ENST00000608051 733 ntBASIC4.73□□□□□ -1.65
SHROOM3Q8TF72 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.73□□□□□ -1.65
SHROOM3Q8TF72 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
SHROOM3Q8TF72 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SHROOM3Q8TF72 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC4.72□□□□□ -1.65
SHROOM3Q8TF72 CASC19-255ENST00000641733 1385 ntBASIC4.72□□□□□ -1.65
SHROOM3Q8TF72 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SHROOM3Q8TF72 AC125257.1-201ENST00000560400 2930 ntBASIC4.72□□□□□ -1.65
SHROOM3Q8TF72 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SHROOM3Q8TF72 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC4.72□□□□□ -1.65
SHROOM3Q8TF72 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SHROOM3Q8TF72 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.72□□□□□ -1.65
SHROOM3Q8TF72 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.72□□□□□ -1.65
SHROOM3Q8TF72 SCARNA10-201ENST00000459255 330 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms