Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCNA1P78396 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CCNA1P78396 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCNA1P78396 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCNA1P78396 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CCNA1P78396 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.45□□□□□ -1.54
CCNA1P78396 AC022417.1-201ENST00000624768 1303 ntBASIC5.45□□□□□ -1.54
CCNA1P78396 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.45□□□□□ -1.54
CCNA1P78396 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
CCNA1P78396 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.44□□□□□ -1.54
CCNA1P78396 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.44□□□□□ -1.54
CCNA1P78396 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCNA1P78396 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCNA1P78396 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
CCNA1P78396 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCNA1P78396 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.44□□□□□ -1.54
CCNA1P78396 RNU6-1331P-201ENST00000363658 106 ntBASIC5.44□□□□□ -1.54
CCNA1P78396 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
CCNA1P78396 AC104297.1-201ENST00000393779 870 ntBASIC5.44□□□□□ -1.54
CCNA1P78396 Z98745.1-201ENST00000402553 494 ntBASIC5.44□□□□□ -1.54
CCNA1P78396 RPL17P36-201ENST00000420302 549 ntBASIC5.44□□□□□ -1.54
CCNA1P78396 GTF2IP2-201ENST00000424290 697 ntBASIC5.44□□□□□ -1.54
CCNA1P78396 MTND4LP12-201ENST00000448237 295 ntBASIC5.44□□□□□ -1.54
CCNA1P78396 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.44□□□□□ -1.54
CCNA1P78396 AL356981.1-201ENST00000454879 684 ntBASIC5.44□□□□□ -1.54
CCNA1P78396 AC093166.2-201ENST00000455969 1017 ntBASIC5.44□□□□□ -1.54
CCNA1P78396 MTND6P32-201ENST00000457611 483 ntBASIC5.44□□□□□ -1.54
CCNA1P78396 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.44□□□□□ -1.54
CCNA1P78396 NPM1P28-201ENST00000492269 840 ntBASIC5.44□□□□□ -1.54
CCNA1P78396 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC5.44□□□□□ -1.54
CCNA1P78396 RNA5SP464-201ENST00000516251 108 ntBASIC5.44□□□□□ -1.54
CCNA1P78396 RNU6-709P-201ENST00000517257 104 ntBASIC5.44□□□□□ -1.54
CCNA1P78396 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.44□□□□□ -1.54
CCNA1P78396 AC018442.3-201ENST00000523025 183 ntBASIC5.44□□□□□ -1.54
CCNA1P78396 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.44□□□□□ -1.54
CCNA1P78396 AC138701.1-201ENST00000524329 714 ntBASIC5.44□□□□□ -1.54
CCNA1P78396 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCNA1P78396 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.44□□□□□ -1.54
CCNA1P78396 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCNA1P78396 AC124856.1-201ENST00000600819 896 ntBASIC5.44□□□□□ -1.54
CCNA1P78396 AL133338.2-201ENST00000604292 736 ntBASIC5.44□□□□□ -1.54
CCNA1P78396 OR51C1P-201ENST00000608504 942 ntBASIC5.44□□□□□ -1.54
CCNA1P78396 AC091046.3-201ENST00000631455 1574 ntBASIC5.44□□□□□ -1.54
CCNA1P78396 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCNA1P78396 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.44□□□□□ -1.54
CCNA1P78396 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCNA1P78396 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCNA1P78396 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCNA1P78396 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.43□□□□□ -1.54
CCNA1P78396 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.43□□□□□ -1.54
CCNA1P78396 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
CCNA1P78396 AL603750.1-201ENST00000624216 1717 ntBASIC5.43□□□□□ -1.54
CCNA1P78396 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
CCNA1P78396 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.43□□□□□ -1.54
CCNA1P78396 RNU6-167P-201ENST00000384292 106 ntBASIC5.43□□□□□ -1.54
CCNA1P78396 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.43□□□□□ -1.54
CCNA1P78396 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCNA1P78396 AC096644.3-201ENST00000416788 338 ntBASIC5.43□□□□□ -1.54
CCNA1P78396 AC007064.3-201ENST00000422608 359 ntBASIC5.43□□□□□ -1.54
CCNA1P78396 AC004975.1-201ENST00000428733 208 ntBASIC5.43□□□□□ -1.54
CCNA1P78396 AC097523.2-201ENST00000435551 652 ntBASIC5.43□□□□□ -1.54
CCNA1P78396 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.43□□□□□ -1.54
CCNA1P78396 MTCYBP21-201ENST00000443300 1113 ntBASIC5.43□□□□□ -1.54
CCNA1P78396 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.43□□□□□ -1.54
CCNA1P78396 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.43□□□□□ -1.54
CCNA1P78396 DEFB109A-201ENST00000482450 265 ntBASIC5.43□□□□□ -1.54
CCNA1P78396 NIP7P2-201ENST00000485801 544 ntBASIC5.43□□□□□ -1.54
CCNA1P78396 OR10D4P-201ENST00000525892 951 ntBASIC5.43□□□□□ -1.54
CCNA1P78396 AP001781.1-201ENST00000530977 207 ntBASIC5.43□□□□□ -1.54
CCNA1P78396 BNIP3P5-201ENST00000562290 498 ntBASIC5.43□□□□□ -1.54
CCNA1P78396 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.43□□□□□ -1.54
CCNA1P78396 CD24P2-201ENST00000565486 219 ntBASIC5.43□□□□□ -1.54
CCNA1P78396 AC023575.1-201ENST00000580510 358 ntBASIC5.43□□□□□ -1.54
CCNA1P78396 PRPF19P1-201ENST00000584766 898 ntBASIC5.43□□□□□ -1.54
CCNA1P78396 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC5.43□□□□□ -1.54
CCNA1P78396 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.43□□□□□ -1.54
CCNA1P78396 AC008782.1-201ENST00000603386 430 ntBASIC5.43□□□□□ -1.54
CCNA1P78396 AL133243.1-201ENST00000614487 366 ntBASIC5.43□□□□□ -1.54
CCNA1P78396 OR52H1-202ENST00000641796 1061 ntBASIC5.43□□□□□ -1.54
CCNA1P78396 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCNA1P78396 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.43□□□□□ -1.54
CCNA1P78396 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
CCNA1P78396 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CCNA1P78396 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.42□□□□□ -1.54
CCNA1P78396 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.42□□□□□ -1.54
CCNA1P78396 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
CCNA1P78396 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCNA1P78396 AP001029.2-203ENST00000589795 4910 ntBASIC5.42□□□□□ -1.54
CCNA1P78396 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCNA1P78396 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCNA1P78396 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCNA1P78396 RNA5SP509-201ENST00000364577 119 ntBASIC5.42□□□□□ -1.54
CCNA1P78396 GAPDHP49-201ENST00000421421 961 ntBASIC5.42□□□□□ -1.54
CCNA1P78396 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.42□□□□□ -1.54
CCNA1P78396 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.42□□□□□ -1.54
CCNA1P78396 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCNA1P78396 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCNA1P78396 NDUFA5P1-201ENST00000433858 341 ntBASIC5.42□□□□□ -1.54
CCNA1P78396 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.42□□□□□ -1.54
CCNA1P78396 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms