Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
EFNA3P52797 MAPK10-263ENST00000641052 4307 ntBASIC4.51□□□□□ -1.69
EFNA3P52797 SMG1P6-201ENST00000532337 2930 ntBASIC4.51□□□□□ -1.69
EFNA3P52797 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
EFNA3P52797 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
EFNA3P52797 TLK1P1-201ENST00000456760 2440 ntBASIC4.51□□□□□ -1.69
EFNA3P52797 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.51□□□□□ -1.69
EFNA3P52797 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.5□□□□□ -1.69
EFNA3P52797 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
EFNA3P52797 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.5□□□□□ -1.69
EFNA3P52797 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
EFNA3P52797 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.5□□□□□ -1.69
EFNA3P52797 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.5□□□□□ -1.69
EFNA3P52797 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
EFNA3P52797 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
EFNA3P52797 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
EFNA3P52797 RNU6-398P-201ENST00000384143 109 ntBASIC4.5□□□□□ -1.69
EFNA3P52797 SNORA79B-201ENST00000410557 148 ntBASIC4.5□□□□□ -1.69
EFNA3P52797 NPM1P40-201ENST00000412758 733 ntBASIC4.5□□□□□ -1.69
EFNA3P52797 AC114755.2-201ENST00000413520 361 ntBASIC4.5□□□□□ -1.69
EFNA3P52797 LINC00993-201ENST00000420453 540 ntBASIC4.5□□□□□ -1.69
EFNA3P52797 AC007064.3-201ENST00000422608 359 ntBASIC4.5□□□□□ -1.69
EFNA3P52797 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.5□□□□□ -1.69
EFNA3P52797 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.5□□□□□ -1.69
EFNA3P52797 RSL24D1P2-201ENST00000445584 366 ntBASIC4.5□□□□□ -1.69
EFNA3P52797 MRPL35P2-201ENST00000448009 511 ntBASIC4.5□□□□□ -1.69
EFNA3P52797 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.5□□□□□ -1.69
EFNA3P52797 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.5□□□□□ -1.69
EFNA3P52797 TPT1P1-201ENST00000458495 518 ntBASIC4.5□□□□□ -1.69
EFNA3P52797 GYG1P1-201ENST00000460864 698 ntBASIC4.5□□□□□ -1.69
EFNA3P52797 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.5□□□□□ -1.69
EFNA3P52797 RN7SL459P-201ENST00000481078 302 ntBASIC4.5□□□□□ -1.69
EFNA3P52797 AC073073.1-201ENST00000493920 463 ntBASIC4.5□□□□□ -1.69
EFNA3P52797 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.5□□□□□ -1.69
EFNA3P52797 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.5□□□□□ -1.69
EFNA3P52797 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.5□□□□□ -1.69
EFNA3P52797 AC092593.2-201ENST00000513866 913 ntBASIC4.5□□□□□ -1.69
EFNA3P52797 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC4.5□□□□□ -1.69
EFNA3P52797 BUD31P1-201ENST00000521828 359 ntBASIC4.5□□□□□ -1.69
EFNA3P52797 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.5□□□□□ -1.69
EFNA3P52797 AC008147.3-201ENST00000548666 354 ntBASIC4.5□□□□□ -1.69
EFNA3P52797 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
EFNA3P52797 MIR3936-201ENST00000584304 110 ntBASIC4.5□□□□□ -1.69
EFNA3P52797 AL121932.1-201ENST00000605542 214 ntBASIC4.5□□□□□ -1.69
EFNA3P52797 AC020658.4-201ENST00000613987 684 ntBASIC4.5□□□□□ -1.69
EFNA3P52797 AP000346.3-201ENST00000622821 210 ntBASIC4.5□□□□□ -1.69
EFNA3P52797 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC4.5□□□□□ -1.69
EFNA3P52797 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC4.5□□□□□ -1.69
EFNA3P52797 AC245100.2-201ENST00000454544 1679 ntBASIC4.5□□□□□ -1.69
EFNA3P52797 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.5□□□□□ -1.69
EFNA3P52797 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.5□□□□□ -1.69
EFNA3P52797 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
EFNA3P52797 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.5□□□□□ -1.69
EFNA3P52797 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
EFNA3P52797 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
EFNA3P52797 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
EFNA3P52797 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.49□□□□□ -1.69
EFNA3P52797 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
EFNA3P52797 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
EFNA3P52797 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
EFNA3P52797 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
EFNA3P52797 AC233289.1-201ENST00000403700 508 ntBASIC4.49□□□□□ -1.69
EFNA3P52797 ARL4AP5-201ENST00000404372 599 ntBASIC4.49□□□□□ -1.69
EFNA3P52797 RNU6-564P-201ENST00000410983 104 ntBASIC4.49□□□□□ -1.69
EFNA3P52797 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC4.49□□□□□ -1.69
EFNA3P52797 BX510359.2-201ENST00000417920 305 ntBASIC4.49□□□□□ -1.69
EFNA3P52797 AC013429.2-201ENST00000418798 781 ntBASIC4.49□□□□□ -1.69
EFNA3P52797 PTP4A1P1-201ENST00000420539 515 ntBASIC4.49□□□□□ -1.69
EFNA3P52797 GLUD1P9-201ENST00000420997 1173 ntBASIC4.49□□□□□ -1.69
EFNA3P52797 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.49□□□□□ -1.69
EFNA3P52797 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.49□□□□□ -1.69
EFNA3P52797 AJ239321.1-201ENST00000424255 564 ntBASIC4.49□□□□□ -1.69
EFNA3P52797 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.49□□□□□ -1.69
EFNA3P52797 AL359265.2-201ENST00000434367 631 ntBASIC4.49□□□□□ -1.69
EFNA3P52797 AL392003.1-201ENST00000434394 243 ntBASIC4.49□□□□□ -1.69
EFNA3P52797 RPS17P8-201ENST00000434525 335 ntBASIC4.49□□□□□ -1.69
EFNA3P52797 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.49□□□□□ -1.69
EFNA3P52797 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.49□□□□□ -1.69
EFNA3P52797 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
EFNA3P52797 BTF3P6-201ENST00000448054 499 ntBASIC4.49□□□□□ -1.69
EFNA3P52797 CEACAMP6-201ENST00000452007 574 ntBASIC4.49□□□□□ -1.69
EFNA3P52797 RN7SL738P-201ENST00000470264 297 ntBASIC4.49□□□□□ -1.69
EFNA3P52797 AC006463.2-201ENST00000473326 348 ntBASIC4.49□□□□□ -1.69
EFNA3P52797 AC104971.1-201ENST00000495117 578 ntBASIC4.49□□□□□ -1.69
EFNA3P52797 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
EFNA3P52797 AC073358.1-201ENST00000505671 684 ntBASIC4.49□□□□□ -1.69
EFNA3P52797 RNU2-30P-201ENST00000516209 141 ntBASIC4.49□□□□□ -1.69
EFNA3P52797 RNU6-709P-201ENST00000517257 104 ntBASIC4.49□□□□□ -1.69
EFNA3P52797 AC105031.1-201ENST00000518550 476 ntBASIC4.49□□□□□ -1.69
EFNA3P52797 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.49□□□□□ -1.69
EFNA3P52797 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
EFNA3P52797 AC133555.2-201ENST00000550213 292 ntBASIC4.49□□□□□ -1.69
EFNA3P52797 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.49□□□□□ -1.69
EFNA3P52797 RN7SL690P-201ENST00000582087 240 ntBASIC4.49□□□□□ -1.69
EFNA3P52797 AC209154.1-201ENST00000582156 337 ntBASIC4.49□□□□□ -1.69
EFNA3P52797 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.49□□□□□ -1.69
EFNA3P52797 AC020915.5-201ENST00000596836 964 ntBASIC4.49□□□□□ -1.69
EFNA3P52797 AC012213.4-201ENST00000606457 354 ntBASIC4.49□□□□□ -1.69
EFNA3P52797 AC107308.1-201ENST00000615897 301 ntBASIC4.49□□□□□ -1.69
EFNA3P52797 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms