Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.45□□□□□ -1.7
GABRA4P48169 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
GABRA4P48169 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
GABRA4P48169 OR14L1P-202ENST00000641545 3009 ntBASIC4.45□□□□□ -1.7
GABRA4P48169 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.45□□□□□ -1.7
GABRA4P48169 AC093909.5-201ENST00000621839 1799 ntBASIC4.45□□□□□ -1.7
GABRA4P48169 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.45□□□□□ -1.7
GABRA4P48169 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
GABRA4P48169 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
GABRA4P48169 AL592148.3-201ENST00000608771 2646 ntBASIC4.44□□□□□ -1.7
GABRA4P48169 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
GABRA4P48169 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.44□□□□□ -1.7
GABRA4P48169 AL592182.3-201ENST00000642132 3304 ntBASIC4.44□□□□□ -1.7
GABRA4P48169 AC021146.4-201ENST00000309229 279 ntBASIC4.44□□□□□ -1.7
GABRA4P48169 MIR129-1-201ENST00000384972 72 ntBASIC4.44□□□□□ -1.7
GABRA4P48169 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC4.44□□□□□ -1.7
GABRA4P48169 AC006065.1-201ENST00000422539 802 ntBASIC4.44□□□□□ -1.7
GABRA4P48169 RPEP3-201ENST00000425462 676 ntBASIC4.44□□□□□ -1.7
GABRA4P48169 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.44□□□□□ -1.7
GABRA4P48169 AC004938.1-201ENST00000438468 308 ntBASIC4.44□□□□□ -1.7
GABRA4P48169 TPT1P13-201ENST00000449760 499 ntBASIC4.44□□□□□ -1.7
GABRA4P48169 CYCSP42-201ENST00000450823 238 ntBASIC4.44□□□□□ -1.7
GABRA4P48169 AC009220.1-201ENST00000451614 275 ntBASIC4.44□□□□□ -1.7
GABRA4P48169 SCARNA10-201ENST00000459255 330 ntBASIC4.44□□□□□ -1.7
GABRA4P48169 RNU7-157P-201ENST00000459600 66 ntBASIC4.44□□□□□ -1.7
GABRA4P48169 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.44□□□□□ -1.7
GABRA4P48169 AK3P4-201ENST00000504283 583 ntBASIC4.44□□□□□ -1.7
GABRA4P48169 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.44□□□□□ -1.7
GABRA4P48169 RNA5SP249-201ENST00000516127 99 ntBASIC4.44□□□□□ -1.7
GABRA4P48169 RN7SKP92-201ENST00000517266 244 ntBASIC4.44□□□□□ -1.7
GABRA4P48169 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.44□□□□□ -1.7
GABRA4P48169 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.44□□□□□ -1.7
GABRA4P48169 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.44□□□□□ -1.7
GABRA4P48169 AC107918.3-201ENST00000533272 382 ntBASIC4.44□□□□□ -1.7
GABRA4P48169 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC4.44□□□□□ -1.7
GABRA4P48169 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.44□□□□□ -1.7
GABRA4P48169 GSTP1P1-201ENST00000548078 319 ntBASIC4.44□□□□□ -1.7
GABRA4P48169 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.44□□□□□ -1.7
GABRA4P48169 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.44□□□□□ -1.7
GABRA4P48169 AP005119.2-201ENST00000579735 1105 ntBASIC4.44□□□□□ -1.7
GABRA4P48169 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.44□□□□□ -1.7
GABRA4P48169 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.44□□□□□ -1.7
GABRA4P48169 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.44□□□□□ -1.7
GABRA4P48169 AL034374.2-201ENST00000605281 548 ntBASIC4.44□□□□□ -1.7
GABRA4P48169 OR7A19P-201ENST00000608051 733 ntBASIC4.44□□□□□ -1.7
GABRA4P48169 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.44□□□□□ -1.7
GABRA4P48169 AC019193.2-201ENST00000610012 634 ntBASIC4.44□□□□□ -1.7
GABRA4P48169 AC011815.3-201ENST00000624194 473 ntBASIC4.44□□□□□ -1.7
GABRA4P48169 U3.53-201ENST00000628922 216 ntBASIC4.44□□□□□ -1.7
GABRA4P48169 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.44□□□□□ -1.7
GABRA4P48169 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
GABRA4P48169 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.44□□□□□ -1.7
GABRA4P48169 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
GABRA4P48169 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
GABRA4P48169 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
GABRA4P48169 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.44□□□□□ -1.7
GABRA4P48169 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
GABRA4P48169 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
GABRA4P48169 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.43□□□□□ -1.7
GABRA4P48169 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
GABRA4P48169 MTCO1P22-201ENST00000604619 1360 ntBASIC4.43□□□□□ -1.7
GABRA4P48169 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
GABRA4P48169 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC4.43□□□□□ -1.7
GABRA4P48169 ZNF137P-201ENST00000456718 1920 ntBASIC4.43□□□□□ -1.7
GABRA4P48169 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.43□□□□□ -1.7
GABRA4P48169 MIR141-201ENST00000384975 95 ntBASIC4.43□□□□□ -1.7
GABRA4P48169 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.43□□□□□ -1.7
GABRA4P48169 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.43□□□□□ -1.7
GABRA4P48169 HMGB1P32-201ENST00000425971 565 ntBASIC4.43□□□□□ -1.7
GABRA4P48169 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.43□□□□□ -1.7
GABRA4P48169 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.43□□□□□ -1.7
GABRA4P48169 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
GABRA4P48169 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.43□□□□□ -1.7
GABRA4P48169 AC112184.1-201ENST00000505179 312 ntBASIC4.43□□□□□ -1.7
GABRA4P48169 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.43□□□□□ -1.7
GABRA4P48169 OR51K1P-201ENST00000510214 950 ntBASIC4.43□□□□□ -1.7
GABRA4P48169 AP001781.1-201ENST00000530977 207 ntBASIC4.43□□□□□ -1.7
GABRA4P48169 MIR4715-201ENST00000584117 79 ntBASIC4.43□□□□□ -1.7
GABRA4P48169 AC020915.5-201ENST00000596836 964 ntBASIC4.43□□□□□ -1.7
GABRA4P48169 AC100847.1-201ENST00000611316 481 ntBASIC4.43□□□□□ -1.7
GABRA4P48169 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.43□□□□□ -1.7
GABRA4P48169 AC015804.1-201ENST00000622935 435 ntBASIC4.43□□□□□ -1.7
GABRA4P48169 AC010435.1-201ENST00000623353 1177 ntBASIC4.43□□□□□ -1.7
GABRA4P48169 AL672167.1-204ENST00000641875 3017 ntBASIC4.43□□□□□ -1.7
GABRA4P48169 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
GABRA4P48169 NEAT1-202ENST00000501122 22743 ntBASIC4.43□□□□□ -1.7
GABRA4P48169 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.43□□□□□ -1.7
GABRA4P48169 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.43□□□□□ -1.7
GABRA4P48169 AC135352.1-201ENST00000506173 1418 ntBASIC4.43□□□□□ -1.7
GABRA4P48169 CASC19-206ENST00000641028 1430 ntBASIC4.43□□□□□ -1.7
GABRA4P48169 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
GABRA4P48169 NAMPTP1-201ENST00000440465 2514 ntBASIC4.43□□□□□ -1.7
GABRA4P48169 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
GABRA4P48169 THAP12P8-201ENST00000447914 2115 ntBASIC4.43□□□□□ -1.7
GABRA4P48169 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
GABRA4P48169 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
GABRA4P48169 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.43□□□□□ -1.7
GABRA4P48169 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
GABRA4P48169 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
GABRA4P48169 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms