Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.33□□□□□ -1.56
HOXC13P31276 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.33□□□□□ -1.56
HOXC13P31276 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HOXC13P31276 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HOXC13P31276 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
HOXC13P31276 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.33□□□□□ -1.56
HOXC13P31276 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
HOXC13P31276 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
HOXC13P31276 RNA5SP87-201ENST00000384155 118 ntBASIC5.33□□□□□ -1.56
HOXC13P31276 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
HOXC13P31276 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
HOXC13P31276 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC5.33□□□□□ -1.56
HOXC13P31276 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HOXC13P31276 COX6B1P1-201ENST00000415962 213 ntBASIC5.33□□□□□ -1.56
HOXC13P31276 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.33□□□□□ -1.56
HOXC13P31276 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.33□□□□□ -1.56
HOXC13P31276 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC5.33□□□□□ -1.56
HOXC13P31276 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
HOXC13P31276 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.33□□□□□ -1.56
HOXC13P31276 AC108157.1-201ENST00000510511 539 ntBASIC5.33□□□□□ -1.56
HOXC13P31276 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.33□□□□□ -1.56
HOXC13P31276 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.33□□□□□ -1.56
HOXC13P31276 OR5AN2P-201ENST00000534535 896 ntBASIC5.33□□□□□ -1.56
HOXC13P31276 AC063949.1-201ENST00000552900 865 ntBASIC5.33□□□□□ -1.56
HOXC13P31276 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.33□□□□□ -1.56
HOXC13P31276 AC009117.1-201ENST00000563948 554 ntBASIC5.33□□□□□ -1.56
HOXC13P31276 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.33□□□□□ -1.56
HOXC13P31276 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.33□□□□□ -1.56
HOXC13P31276 AL133247.2-201ENST00000603236 482 ntBASIC5.33□□□□□ -1.56
HOXC13P31276 AL049844.2-201ENST00000604280 628 ntBASIC5.33□□□□□ -1.56
HOXC13P31276 AC104687.2-201ENST00000604442 342 ntBASIC5.33□□□□□ -1.56
HOXC13P31276 AC009318.3-201ENST00000616916 503 ntBASIC5.33□□□□□ -1.56
HOXC13P31276 uc_338.9-201ENST00000617424 182 ntBASIC5.33□□□□□ -1.56
HOXC13P31276 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.33□□□□□ -1.56
HOXC13P31276 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HOXC13P31276 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HOXC13P31276 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
HOXC13P31276 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
HOXC13P31276 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
HOXC13P31276 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.33□□□□□ -1.56
HOXC13P31276 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HOXC13P31276 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.32□□□□□ -1.56
HOXC13P31276 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
HOXC13P31276 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
HOXC13P31276 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
HOXC13P31276 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HOXC13P31276 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HOXC13P31276 SNORA5.1-201ENST00000384275 131 ntBASIC5.32□□□□□ -1.56
HOXC13P31276 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.32□□□□□ -1.56
HOXC13P31276 RPL5P25-201ENST00000441148 775 ntBASIC5.32□□□□□ -1.56
HOXC13P31276 RPL36AP15-201ENST00000444514 266 ntBASIC5.32□□□□□ -1.56
HOXC13P31276 AC012512.1-201ENST00000446594 718 ntBASIC5.32□□□□□ -1.56
HOXC13P31276 AC239809.1-201ENST00000450470 217 ntBASIC5.32□□□□□ -1.56
HOXC13P31276 RPL23AP12-201ENST00000467573 473 ntBASIC5.32□□□□□ -1.56
HOXC13P31276 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.32□□□□□ -1.56
HOXC13P31276 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC5.32□□□□□ -1.56
HOXC13P31276 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC5.32□□□□□ -1.56
HOXC13P31276 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC5.32□□□□□ -1.56
HOXC13P31276 RNU6-889P-201ENST00000517189 103 ntBASIC5.32□□□□□ -1.56
HOXC13P31276 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.32□□□□□ -1.56
HOXC13P31276 RAB9BP1-201ENST00000519581 626 ntBASIC5.32□□□□□ -1.56
HOXC13P31276 AC008083.2-201ENST00000546707 476 ntBASIC5.32□□□□□ -1.56
HOXC13P31276 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HOXC13P31276 AC084757.1-201ENST00000559987 490 ntBASIC5.32□□□□□ -1.56
HOXC13P31276 MIR4716-201ENST00000579628 84 ntBASIC5.32□□□□□ -1.56
HOXC13P31276 AC083809.1-201ENST00000615051 472 ntBASIC5.32□□□□□ -1.56
HOXC13P31276 AC108359.1-201ENST00000616451 1211 ntBASIC5.32□□□□□ -1.56
HOXC13P31276 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.32□□□□□ -1.56
HOXC13P31276 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC5.32□□□□□ -1.56
HOXC13P31276 OR5AC4P-202ENST00000642086 985 ntBASIC5.32□□□□□ -1.56
HOXC13P31276 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.32□□□□□ -1.56
HOXC13P31276 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HOXC13P31276 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HOXC13P31276 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
HOXC13P31276 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HOXC13P31276 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
HOXC13P31276 AL049555.1-201ENST00000562834 1933 ntBASIC5.32□□□□□ -1.56
HOXC13P31276 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HOXC13P31276 AC022893.2-201ENST00000564832 3296 ntBASIC5.32□□□□□ -1.56
HOXC13P31276 AC004656.1-201ENST00000568479 4951 ntBASIC5.32□□□□□ -1.56
HOXC13P31276 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
HOXC13P31276 AC092376.2-201ENST00000622621 4116 ntBASIC5.32□□□□□ -1.56
HOXC13P31276 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
HOXC13P31276 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.31□□□□□ -1.56
HOXC13P31276 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
HOXC13P31276 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HOXC13P31276 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
HOXC13P31276 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.31□□□□□ -1.56
HOXC13P31276 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.31□□□□□ -1.56
HOXC13P31276 THAP12P4-201ENST00000528321 2266 ntBASIC5.31□□□□□ -1.56
HOXC13P31276 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HOXC13P31276 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
HOXC13P31276 MIR192-201ENST00000384915 110 ntBASIC5.31□□□□□ -1.56
HOXC13P31276 MIR92A2-201ENST00000385299 75 ntBASIC5.31□□□□□ -1.56
HOXC13P31276 CHEK2P3-201ENST00000416118 248 ntBASIC5.31□□□□□ -1.56
HOXC13P31276 P2RY10P2-201ENST00000416730 913 ntBASIC5.31□□□□□ -1.56
HOXC13P31276 DDX39BP1-205ENST00000422507 192 ntBASIC5.31□□□□□ -1.56
HOXC13P31276 C4BPAP2-201ENST00000428434 478 ntBASIC5.31□□□□□ -1.56
HOXC13P31276 AC245517.2-201ENST00000442890 346 ntBASIC5.31□□□□□ -1.56
HOXC13P31276 KNOP1P3-201ENST00000446933 426 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms