Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 AL137072.1-201ENST00000603444 466 ntBASIC4.95□□□□□ -1.62
HOXA9P31269 AL133338.2-201ENST00000604292 736 ntBASIC4.95□□□□□ -1.62
HOXA9P31269 OR7A19P-201ENST00000608051 733 ntBASIC4.95□□□□□ -1.62
HOXA9P31269 MLECP1-201ENST00000615893 709 ntBASIC4.95□□□□□ -1.62
HOXA9P31269 MIR6830-201ENST00000636015 70 ntBASIC4.95□□□□□ -1.62
HOXA9P31269 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HOXA9P31269 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.95□□□□□ -1.62
HOXA9P31269 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.95□□□□□ -1.62
HOXA9P31269 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
HOXA9P31269 AP000756.2-201ENST00000624168 2567 ntBASIC4.95□□□□□ -1.62
HOXA9P31269 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
HOXA9P31269 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
HOXA9P31269 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
HOXA9P31269 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HOXA9P31269 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HOXA9P31269 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HOXA9P31269 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HOXA9P31269 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.94□□□□□ -1.62
HOXA9P31269 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HOXA9P31269 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HOXA9P31269 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
HOXA9P31269 AL590762.2-201ENST00000395798 571 ntBASIC4.94□□□□□ -1.62
HOXA9P31269 Z98745.1-201ENST00000402553 494 ntBASIC4.94□□□□□ -1.62
HOXA9P31269 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HOXA9P31269 OR5M12P-201ENST00000423388 929 ntBASIC4.94□□□□□ -1.62
HOXA9P31269 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.94□□□□□ -1.62
HOXA9P31269 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC4.94□□□□□ -1.62
HOXA9P31269 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.94□□□□□ -1.62
HOXA9P31269 YWHAZP2-201ENST00000440317 728 ntBASIC4.94□□□□□ -1.62
HOXA9P31269 CYCSP24-201ENST00000445119 316 ntBASIC4.94□□□□□ -1.62
HOXA9P31269 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.94□□□□□ -1.62
HOXA9P31269 PPIAP21-201ENST00000464473 501 ntBASIC4.94□□□□□ -1.62
HOXA9P31269 AC023424.1-201ENST00000496058 459 ntBASIC4.94□□□□□ -1.62
HOXA9P31269 AC025164.1-201ENST00000496249 478 ntBASIC4.94□□□□□ -1.62
HOXA9P31269 AC083829.1-201ENST00000503756 657 ntBASIC4.94□□□□□ -1.62
HOXA9P31269 AC025674.1-201ENST00000507074 324 ntBASIC4.94□□□□□ -1.62
HOXA9P31269 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HOXA9P31269 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC4.94□□□□□ -1.62
HOXA9P31269 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.94□□□□□ -1.62
HOXA9P31269 AP001781.1-201ENST00000530977 207 ntBASIC4.94□□□□□ -1.62
HOXA9P31269 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
HOXA9P31269 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.94□□□□□ -1.62
HOXA9P31269 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.94□□□□□ -1.62
HOXA9P31269 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HOXA9P31269 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.94□□□□□ -1.62
HOXA9P31269 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.94□□□□□ -1.62
HOXA9P31269 AC092653.1-201ENST00000608509 531 ntBASIC4.94□□□□□ -1.62
HOXA9P31269 AC005962.2-201ENST00000611427 652 ntBASIC4.94□□□□□ -1.62
HOXA9P31269 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HOXA9P31269 MIR6716-201ENST00000613413 80 ntBASIC4.94□□□□□ -1.62
HOXA9P31269 U3.53-201ENST00000628922 216 ntBASIC4.94□□□□□ -1.62
HOXA9P31269 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.94□□□□□ -1.62
HOXA9P31269 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HOXA9P31269 AC009643.2-201ENST00000603543 1448 ntBASIC4.94□□□□□ -1.62
HOXA9P31269 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HOXA9P31269 AC104623.2-202ENST00000623477 4002 ntBASIC4.94□□□□□ -1.62
HOXA9P31269 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HOXA9P31269 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HOXA9P31269 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HOXA9P31269 CR382285.2-201ENST00000624662 1495 ntBASIC4.94□□□□□ -1.62
HOXA9P31269 OR14L1P-202ENST00000641545 3009 ntBASIC4.94□□□□□ -1.62
HOXA9P31269 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
HOXA9P31269 AC009951.1-201ENST00000623674 2614 ntBASIC4.93□□□□□ -1.62
HOXA9P31269 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
HOXA9P31269 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.93□□□□□ -1.62
HOXA9P31269 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
HOXA9P31269 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HOXA9P31269 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HOXA9P31269 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HOXA9P31269 FAM3C2-201ENST00000312214 681 ntBASIC4.93□□□□□ -1.62
HOXA9P31269 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
HOXA9P31269 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
HOXA9P31269 SDHCP2-201ENST00000398565 501 ntBASIC4.93□□□□□ -1.62
HOXA9P31269 SNORA11-201ENST00000408789 128 ntBASIC4.93□□□□□ -1.62
HOXA9P31269 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.93□□□□□ -1.62
HOXA9P31269 TET1P1-201ENST00000426627 2301 ntBASIC4.93□□□□□ -1.62
HOXA9P31269 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.93□□□□□ -1.62
HOXA9P31269 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.93□□□□□ -1.62
HOXA9P31269 NDUFA5P1-201ENST00000433858 341 ntBASIC4.93□□□□□ -1.62
HOXA9P31269 AC108463.1-201ENST00000450258 347 ntBASIC4.93□□□□□ -1.62
HOXA9P31269 AC009963.2-201ENST00000453431 138 ntBASIC4.93□□□□□ -1.62
HOXA9P31269 AC093166.2-201ENST00000455969 1017 ntBASIC4.93□□□□□ -1.62
HOXA9P31269 AC098583.1-201ENST00000480875 255 ntBASIC4.93□□□□□ -1.62
HOXA9P31269 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.93□□□□□ -1.62
HOXA9P31269 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.93□□□□□ -1.62
HOXA9P31269 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.93□□□□□ -1.62
HOXA9P31269 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.93□□□□□ -1.62
HOXA9P31269 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.93□□□□□ -1.62
HOXA9P31269 AC068831.4-201ENST00000556118 109 ntBASIC4.93□□□□□ -1.62
HOXA9P31269 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.93□□□□□ -1.62
HOXA9P31269 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.93□□□□□ -1.62
HOXA9P31269 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.93□□□□□ -1.62
HOXA9P31269 SS18L2P2-201ENST00000583960 235 ntBASIC4.93□□□□□ -1.62
HOXA9P31269 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
HOXA9P31269 AL133243.1-201ENST00000614487 366 ntBASIC4.93□□□□□ -1.62
HOXA9P31269 AC068831.8-201ENST00000620171 435 ntBASIC4.93□□□□□ -1.62
HOXA9P31269 AP005019.3-201ENST00000620418 560 ntBASIC4.93□□□□□ -1.62
HOXA9P31269 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.93□□□□□ -1.62
HOXA9P31269 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HOXA9P31269 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms