Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 AP006222.1-205ENST00000450734 457 ntBASIC5.43□□□□□ -1.54
PROM1O43490 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PROM1O43490 AC002553.2-201ENST00000453217 340 ntBASIC5.43□□□□□ -1.54
PROM1O43490 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PROM1O43490 COX6B1P2-201ENST00000489624 230 ntBASIC5.43□□□□□ -1.54
PROM1O43490 AC009120.1-201ENST00000493458 473 ntBASIC5.43□□□□□ -1.54
PROM1O43490 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.43□□□□□ -1.54
PROM1O43490 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.43□□□□□ -1.54
PROM1O43490 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.43□□□□□ -1.54
PROM1O43490 OR5BM1P-201ENST00000512021 366 ntBASIC5.43□□□□□ -1.54
PROM1O43490 RNU6-1129P-201ENST00000515964 104 ntBASIC5.43□□□□□ -1.54
PROM1O43490 SCARNA6.1-201ENST00000516989 238 ntBASIC5.43□□□□□ -1.54
PROM1O43490 AC013701.1-201ENST00000522657 465 ntBASIC5.43□□□□□ -1.54
PROM1O43490 AP003461.1-201ENST00000528866 78 ntBASIC5.43□□□□□ -1.54
PROM1O43490 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.43□□□□□ -1.54
PROM1O43490 AP002373.2-201ENST00000541631 1060 ntBASIC5.43□□□□□ -1.54
PROM1O43490 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.43□□□□□ -1.54
PROM1O43490 AC090695.1-201ENST00000561269 1222 ntBASIC5.43□□□□□ -1.54
PROM1O43490 ZNF322P1-201ENST00000568013 1209 ntBASIC5.43□□□□□ -1.54
PROM1O43490 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC5.43□□□□□ -1.54
PROM1O43490 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5.43□□□□□ -1.54
PROM1O43490 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC5.43□□□□□ -1.54
PROM1O43490 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.43□□□□□ -1.54
PROM1O43490 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PROM1O43490 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PROM1O43490 AC009237.15-201ENST00000610252 501 ntBASIC5.43□□□□□ -1.54
PROM1O43490 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC5.43□□□□□ -1.54
PROM1O43490 AL035661.1-201ENST00000620459 1144 ntBASIC5.43□□□□□ -1.54
PROM1O43490 AC067852.7-201ENST00000623270 535 ntBASIC5.43□□□□□ -1.54
PROM1O43490 AP003497.2-201ENST00000624220 967 ntBASIC5.43□□□□□ -1.54
PROM1O43490 AC007671.2-201ENST00000637344 619 ntBASIC5.43□□□□□ -1.54
PROM1O43490 AL049767.1-202ENST00000637826 242 ntBASIC5.43□□□□□ -1.54
PROM1O43490 AC103706.2-201ENST00000638080 240 ntBASIC5.43□□□□□ -1.54
PROM1O43490 CASC19-222ENST00000641321 1173 ntBASIC5.43□□□□□ -1.54
PROM1O43490 LINC02211-204ENST00000642024 1070 ntBASIC5.43□□□□□ -1.54
PROM1O43490 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
PROM1O43490 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
PROM1O43490 AC005005.4-201ENST00000623789 16698 ntBASIC5.43□□□□□ -1.54
PROM1O43490 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PROM1O43490 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PROM1O43490 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
PROM1O43490 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.43□□□□□ -1.54
PROM1O43490 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.43□□□□□ -1.54
PROM1O43490 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.43□□□□□ -1.54
PROM1O43490 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PROM1O43490 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PROM1O43490 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC5.43□□□□□ -1.54
PROM1O43490 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
PROM1O43490 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.42□□□□□ -1.54
PROM1O43490 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
PROM1O43490 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PROM1O43490 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
PROM1O43490 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PROM1O43490 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
PROM1O43490 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
PROM1O43490 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PROM1O43490 UGT2B26P-201ENST00000508672 1613 ntBASIC5.42□□□□□ -1.54
PROM1O43490 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PROM1O43490 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PROM1O43490 RNA5SP187-201ENST00000384400 119 ntBASIC5.42□□□□□ -1.54
PROM1O43490 AL590084.1-201ENST00000407885 387 ntBASIC5.42□□□□□ -1.54
PROM1O43490 RNU4-74P-201ENST00000411280 161 ntBASIC5.42□□□□□ -1.54
PROM1O43490 BTF3L4P1-201ENST00000413813 468 ntBASIC5.42□□□□□ -1.54
PROM1O43490 RPS7P9-201ENST00000414704 586 ntBASIC5.42□□□□□ -1.54
PROM1O43490 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.42□□□□□ -1.54
PROM1O43490 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC5.42□□□□□ -1.54
PROM1O43490 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC5.42□□□□□ -1.54
PROM1O43490 C1DP1-201ENST00000426049 402 ntBASIC5.42□□□□□ -1.54
PROM1O43490 AL589823.1-201ENST00000429577 183 ntBASIC5.42□□□□□ -1.54
PROM1O43490 ETF1P3-201ENST00000430422 1160 ntBASIC5.42□□□□□ -1.54
PROM1O43490 FGF7P5-201ENST00000441829 291 ntBASIC5.42□□□□□ -1.54
PROM1O43490 RPL34P26-201ENST00000445636 354 ntBASIC5.42□□□□□ -1.54
PROM1O43490 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC5.42□□□□□ -1.54
PROM1O43490 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC5.42□□□□□ -1.54
PROM1O43490 MEMO1P4-201ENST00000453590 386 ntBASIC5.42□□□□□ -1.54
PROM1O43490 MRPL35P4-201ENST00000453682 566 ntBASIC5.42□□□□□ -1.54
PROM1O43490 NECAP1P2-201ENST00000455668 727 ntBASIC5.42□□□□□ -1.54
PROM1O43490 AL133244.1-201ENST00000456007 258 ntBASIC5.42□□□□□ -1.54
PROM1O43490 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.42□□□□□ -1.54
PROM1O43490 RPL31P3-201ENST00000458430 332 ntBASIC5.42□□□□□ -1.54
PROM1O43490 AC023141.9-201ENST00000458734 412 ntBASIC5.42□□□□□ -1.54
PROM1O43490 RPS20P4-201ENST00000461659 355 ntBASIC5.42□□□□□ -1.54
PROM1O43490 RPS23P2-201ENST00000463671 415 ntBASIC5.42□□□□□ -1.54
PROM1O43490 AC011476.1-201ENST00000466725 307 ntBASIC5.42□□□□□ -1.54
PROM1O43490 AC069528.1-202ENST00000482888 637 ntBASIC5.42□□□□□ -1.54
PROM1O43490 AC073610.1-201ENST00000489971 396 ntBASIC5.42□□□□□ -1.54
PROM1O43490 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC5.42□□□□□ -1.54
PROM1O43490 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.42□□□□□ -1.54
PROM1O43490 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.42□□□□□ -1.54
PROM1O43490 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.42□□□□□ -1.54
PROM1O43490 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.42□□□□□ -1.54
PROM1O43490 AL117351.2-201ENST00000513571 157 ntBASIC5.42□□□□□ -1.54
PROM1O43490 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.42□□□□□ -1.54
PROM1O43490 HMGB1P1-201ENST00000522557 636 ntBASIC5.42□□□□□ -1.54
PROM1O43490 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC5.42□□□□□ -1.54
PROM1O43490 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.42□□□□□ -1.54
PROM1O43490 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC5.42□□□□□ -1.54
PROM1O43490 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.42□□□□□ -1.54
PROM1O43490 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.42□□□□□ -1.54
PROM1O43490 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms