Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.72□□□□□ -1.65
PDLIM1O00151 ECM1P2-201ENST00000503354 1577 ntBASIC4.72□□□□□ -1.65
PDLIM1O00151 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PDLIM1O00151 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.72□□□□□ -1.65
PDLIM1O00151 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PDLIM1O00151 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PDLIM1O00151 PABPC1P6-201ENST00000445594 1829 ntBASIC4.72□□□□□ -1.65
PDLIM1O00151 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PDLIM1O00151 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
PDLIM1O00151 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
PDLIM1O00151 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.71□□□□□ -1.65
PDLIM1O00151 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
PDLIM1O00151 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.71□□□□□ -1.65
PDLIM1O00151 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
PDLIM1O00151 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.71□□□□□ -1.66
PDLIM1O00151 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PDLIM1O00151 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.71□□□□□ -1.66
PDLIM1O00151 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
PDLIM1O00151 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PDLIM1O00151 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
PDLIM1O00151 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
PDLIM1O00151 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PDLIM1O00151 RNU6-171P-201ENST00000384354 107 ntBASIC4.71□□□□□ -1.66
PDLIM1O00151 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.71□□□□□ -1.66
PDLIM1O00151 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.71□□□□□ -1.66
PDLIM1O00151 AL391219.1-201ENST00000422570 483 ntBASIC4.71□□□□□ -1.66
PDLIM1O00151 RPL7P57-201ENST00000423238 740 ntBASIC4.71□□□□□ -1.66
PDLIM1O00151 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC4.71□□□□□ -1.66
PDLIM1O00151 AC108075.1-201ENST00000424692 529 ntBASIC4.71□□□□□ -1.66
PDLIM1O00151 AC093655.2-201ENST00000425735 631 ntBASIC4.71□□□□□ -1.66
PDLIM1O00151 NPM1P26-201ENST00000426339 738 ntBASIC4.71□□□□□ -1.66
PDLIM1O00151 NANOGP6-201ENST00000429190 847 ntBASIC4.71□□□□□ -1.66
PDLIM1O00151 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.71□□□□□ -1.66
PDLIM1O00151 OR52B5P-201ENST00000435337 951 ntBASIC4.71□□□□□ -1.66
PDLIM1O00151 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.71□□□□□ -1.66
PDLIM1O00151 NDUFA5P8-201ENST00000449019 346 ntBASIC4.71□□□□□ -1.66
PDLIM1O00151 PANCR-201ENST00000503456 493 ntTSL 5 BASIC4.71□□□□□ -1.66
PDLIM1O00151 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.71□□□□□ -1.66
PDLIM1O00151 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PDLIM1O00151 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.71□□□□□ -1.66
PDLIM1O00151 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.71□□□□□ -1.66
PDLIM1O00151 AL121834.1-201ENST00000572284 509 ntBASIC4.71□□□□□ -1.66
PDLIM1O00151 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.71□□□□□ -1.66
PDLIM1O00151 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.71□□□□□ -1.66
PDLIM1O00151 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.71□□□□□ -1.66
PDLIM1O00151 SLC25A36P1-201ENST00000590111 465 ntBASIC4.71□□□□□ -1.66
PDLIM1O00151 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.71□□□□□ -1.66
PDLIM1O00151 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC4.71□□□□□ -1.66
PDLIM1O00151 AC012213.4-201ENST00000606457 354 ntBASIC4.71□□□□□ -1.66
PDLIM1O00151 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.71□□□□□ -1.66
PDLIM1O00151 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC4.71□□□□□ -1.66
PDLIM1O00151 AC015922.4-201ENST00000612568 690 ntBASIC4.71□□□□□ -1.66
PDLIM1O00151 AC090527.3-201ENST00000619041 548 ntBASIC4.71□□□□□ -1.66
PDLIM1O00151 AC008115.4-201ENST00000619780 775 ntBASIC4.71□□□□□ -1.66
PDLIM1O00151 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.71□□□□□ -1.66
PDLIM1O00151 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC4.71□□□□□ -1.66
PDLIM1O00151 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.71□□□□□ -1.66
PDLIM1O00151 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
PDLIM1O00151 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.71□□□□□ -1.66
PDLIM1O00151 OR52B5P-202ENST00000641118 1110 ntBASIC4.71□□□□□ -1.66
PDLIM1O00151 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PDLIM1O00151 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PDLIM1O00151 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PDLIM1O00151 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
PDLIM1O00151 VPS35P1-201ENST00000563400 1518 ntBASIC4.71□□□□□ -1.66
PDLIM1O00151 AC139713.2-215ENST00000641428 5037 ntBASIC4.71□□□□□ -1.66
PDLIM1O00151 AL356317.1-201ENST00000396110 1436 ntBASIC4.71□□□□□ -1.66
PDLIM1O00151 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
PDLIM1O00151 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.71□□□□□ -1.66
PDLIM1O00151 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PDLIM1O00151 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
PDLIM1O00151 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
PDLIM1O00151 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PDLIM1O00151 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PDLIM1O00151 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PDLIM1O00151 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
PDLIM1O00151 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.7□□□□□ -1.66
PDLIM1O00151 SNORA2.3-201ENST00000383920 135 ntBASIC4.7□□□□□ -1.66
PDLIM1O00151 SNORA67-201ENST00000384423 137 ntBASIC4.7□□□□□ -1.66
PDLIM1O00151 RNU1-149P-201ENST00000390870 161 ntBASIC4.7□□□□□ -1.66
PDLIM1O00151 NPM1P10-201ENST00000398310 865 ntBASIC4.7□□□□□ -1.66
PDLIM1O00151 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.7□□□□□ -1.66
PDLIM1O00151 AL355433.1-201ENST00000422804 300 ntBASIC4.7□□□□□ -1.66
PDLIM1O00151 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.7□□□□□ -1.66
PDLIM1O00151 FAM96AP1-201ENST00000430879 482 ntBASIC4.7□□□□□ -1.66
PDLIM1O00151 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PDLIM1O00151 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.7□□□□□ -1.66
PDLIM1O00151 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.7□□□□□ -1.66
PDLIM1O00151 CNOT7P2-201ENST00000441051 832 ntBASIC4.7□□□□□ -1.66
PDLIM1O00151 AL163193.1-201ENST00000444895 788 ntBASIC4.7□□□□□ -1.66
PDLIM1O00151 AC004980.3-201ENST00000447046 365 ntBASIC4.7□□□□□ -1.66
PDLIM1O00151 AL606490.1-201ENST00000452266 765 ntBASIC4.7□□□□□ -1.66
PDLIM1O00151 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.7□□□□□ -1.66
PDLIM1O00151 APOOP2-201ENST00000461561 539 ntBASIC4.7□□□□□ -1.66
PDLIM1O00151 RN7SL727P-201ENST00000482164 296 ntBASIC4.7□□□□□ -1.66
PDLIM1O00151 RPS4XP1-201ENST00000482189 787 ntBASIC4.7□□□□□ -1.66
PDLIM1O00151 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC4.7□□□□□ -1.66
PDLIM1O00151 RN7SL629P-201ENST00000489622 285 ntBASIC4.7□□□□□ -1.66
PDLIM1O00151 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.7□□□□□ -1.66
PDLIM1O00151 RNA5SP34-201ENST00000516887 130 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms