Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC5.65□□□□□ -1.5
CCDC78A2IDD5 AC008565.1-201ENST00000509046 885 ntBASIC5.65□□□□□ -1.5
CCDC78A2IDD5 AC119751.1-201ENST00000513357 765 ntBASIC5.65□□□□□ -1.5
CCDC78A2IDD5 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC78A2IDD5 RNU6-1129P-201ENST00000515964 104 ntBASIC5.65□□□□□ -1.5
CCDC78A2IDD5 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC78A2IDD5 HMGB1P1-201ENST00000522557 636 ntBASIC5.65□□□□□ -1.5
CCDC78A2IDD5 MRPS16P1-201ENST00000523462 412 ntBASIC5.65□□□□□ -1.5
CCDC78A2IDD5 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC78A2IDD5 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC78A2IDD5 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC78A2IDD5 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC78A2IDD5 AC027544.3-201ENST00000535082 757 ntBASIC5.65□□□□□ -1.5
CCDC78A2IDD5 REXO2-218ENST00000544827 880 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC78A2IDD5 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC5.65□□□□□ -1.5
CCDC78A2IDD5 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC78A2IDD5 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC78A2IDD5 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC78A2IDD5 AC016180.1-201ENST00000567945 403 ntBASIC5.65□□□□□ -1.5
CCDC78A2IDD5 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC78A2IDD5 AL354943.1-201ENST00000572103 781 ntBASIC5.65□□□□□ -1.5
CCDC78A2IDD5 AC007448.1-201ENST00000582714 234 ntBASIC5.65□□□□□ -1.5
CCDC78A2IDD5 AC005377.1-201ENST00000605126 456 ntBASIC5.65□□□□□ -1.5
CCDC78A2IDD5 AC090425.2-201ENST00000608818 501 ntBASIC5.65□□□□□ -1.5
CCDC78A2IDD5 HULC.1-201ENST00000612720 240 ntBASIC5.65□□□□□ -1.5
CCDC78A2IDD5 AC015712.7-201ENST00000615211 635 ntBASIC5.65□□□□□ -1.5
CCDC78A2IDD5 RN7SL544P-201ENST00000617232 284 ntBASIC5.65□□□□□ -1.5
CCDC78A2IDD5 MIR6886-201ENST00000619864 61 ntBASIC5.65□□□□□ -1.5
CCDC78A2IDD5 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC78A2IDD5 RN7SL763P-201ENST00000620922 284 ntBASIC5.65□□□□□ -1.5
CCDC78A2IDD5 AC127024.6-201ENST00000621598 424 ntBASIC5.65□□□□□ -1.5
CCDC78A2IDD5 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC78A2IDD5 AC109454.4-201ENST00000623411 649 ntBASIC5.65□□□□□ -1.5
CCDC78A2IDD5 AC021106.3-201ENST00000623925 531 ntBASIC5.65□□□□□ -1.5
CCDC78A2IDD5 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC78A2IDD5 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC78A2IDD5 AC099654.6-201ENST00000636487 512 ntBASIC5.65□□□□□ -1.5
CCDC78A2IDD5 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.65□□□□□ -1.51
CCDC78A2IDD5 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
CCDC78A2IDD5 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CCDC78A2IDD5 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.51
CCDC78A2IDD5 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.65□□□□□ -1.51
CCDC78A2IDD5 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
CCDC78A2IDD5 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CCDC78A2IDD5 AC106872.5-201ENST00000508856 1416 ntBASIC5.65□□□□□ -1.51
CCDC78A2IDD5 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
CCDC78A2IDD5 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC78A2IDD5 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
CCDC78A2IDD5 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC78A2IDD5 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC78A2IDD5 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC78A2IDD5 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC78A2IDD5 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC78A2IDD5 MRRFP1-201ENST00000435941 1675 ntBASIC5.64□□□□□ -1.51
CCDC78A2IDD5 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC78A2IDD5 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC78A2IDD5 RN7SKP185-201ENST00000362813 326 ntBASIC5.64□□□□□ -1.51
CCDC78A2IDD5 SNORA70.6-201ENST00000383934 134 ntBASIC5.64□□□□□ -1.51
CCDC78A2IDD5 RNU6-1242P-201ENST00000391052 103 ntBASIC5.64□□□□□ -1.51
CCDC78A2IDD5 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC78A2IDD5 AC233289.1-201ENST00000403700 508 ntBASIC5.64□□□□□ -1.51
CCDC78A2IDD5 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC78A2IDD5 AL008987.1-201ENST00000415528 237 ntBASIC5.64□□□□□ -1.51
CCDC78A2IDD5 AC016907.1-201ENST00000419483 435 ntBASIC5.64□□□□□ -1.51
CCDC78A2IDD5 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC78A2IDD5 ZDHHC20P2-201ENST00000424108 429 ntBASIC5.64□□□□□ -1.51
CCDC78A2IDD5 OR10T1P-201ENST00000424327 947 ntBASIC5.64□□□□□ -1.51
CCDC78A2IDD5 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC78A2IDD5 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC78A2IDD5 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC78A2IDD5 AC138761.5-201ENST00000433967 325 ntBASIC5.64□□□□□ -1.51
CCDC78A2IDD5 AC006335.2-201ENST00000437993 330 ntBASIC5.64□□□□□ -1.51
CCDC78A2IDD5 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC78A2IDD5 CASP3P1-201ENST00000446037 609 ntBASIC5.64□□□□□ -1.51
CCDC78A2IDD5 AC092685.1-201ENST00000447960 1243 ntBASIC5.64□□□□□ -1.51
CCDC78A2IDD5 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC78A2IDD5 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC78A2IDD5 AC037198.2-201ENST00000478845 733 ntBASIC5.64□□□□□ -1.51
CCDC78A2IDD5 RPF2P2-201ENST00000504693 896 ntBASIC5.64□□□□□ -1.51
CCDC78A2IDD5 AC118282.2-201ENST00000508739 374 ntBASIC5.64□□□□□ -1.51
CCDC78A2IDD5 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC78A2IDD5 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
CCDC78A2IDD5 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC78A2IDD5 SNORA70.11-201ENST00000515987 138 ntBASIC5.64□□□□□ -1.51
CCDC78A2IDD5 SNORA70.13-201ENST00000516116 138 ntBASIC5.64□□□□□ -1.51
CCDC78A2IDD5 RNU6-1308P-201ENST00000516817 103 ntBASIC5.64□□□□□ -1.51
CCDC78A2IDD5 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC78A2IDD5 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.64□□□□□ -1.51
CCDC78A2IDD5 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.64□□□□□ -1.51
CCDC78A2IDD5 MTND2P26-201ENST00000528255 1029 ntBASIC5.64□□□□□ -1.51
CCDC78A2IDD5 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC78A2IDD5 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC78A2IDD5 AL049870.4-201ENST00000555741 486 ntBASIC5.64□□□□□ -1.51
CCDC78A2IDD5 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC78A2IDD5 AC002400.1-201ENST00000569310 726 ntBASIC5.64□□□□□ -1.51
CCDC78A2IDD5 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC78A2IDD5 OR2BH1P-201ENST00000608850 864 ntBASIC5.64□□□□□ -1.51
CCDC78A2IDD5 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC78A2IDD5 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC78A2IDD5 LINC02211-204ENST00000642024 1070 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms