Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
COPS3Q9UNS2 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
COPS3Q9UNS2 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.33□□□□□ -1.72
COPS3Q9UNS2 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.33□□□□□ -1.72
COPS3Q9UNS2 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
COPS3Q9UNS2 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.33□□□□□ -1.72
COPS3Q9UNS2 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
COPS3Q9UNS2 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
COPS3Q9UNS2 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
COPS3Q9UNS2 RNU1-83P-201ENST00000363426 164 ntBASIC4.33□□□□□ -1.72
COPS3Q9UNS2 RNU4-7P-201ENST00000364758 141 ntBASIC4.33□□□□□ -1.72
COPS3Q9UNS2 AL139039.2-201ENST00000407436 479 ntBASIC4.33□□□□□ -1.72
COPS3Q9UNS2 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.33□□□□□ -1.72
COPS3Q9UNS2 GAPDHP49-201ENST00000421421 961 ntBASIC4.33□□□□□ -1.72
COPS3Q9UNS2 RPL23AP4-201ENST00000427757 463 ntBASIC4.33□□□□□ -1.72
COPS3Q9UNS2 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.33□□□□□ -1.72
COPS3Q9UNS2 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.33□□□□□ -1.72
COPS3Q9UNS2 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.33□□□□□ -1.72
COPS3Q9UNS2 NMNAT1P2-201ENST00000435192 860 ntBASIC4.33□□□□□ -1.72
COPS3Q9UNS2 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.33□□□□□ -1.72
COPS3Q9UNS2 RHOT1P3-201ENST00000436571 331 ntBASIC4.33□□□□□ -1.72
COPS3Q9UNS2 AL391987.1-201ENST00000441025 200 ntBASIC4.33□□□□□ -1.72
COPS3Q9UNS2 AL606490.8-201ENST00000441624 319 ntBASIC4.33□□□□□ -1.72
COPS3Q9UNS2 OR7E125P-201ENST00000443450 846 ntBASIC4.33□□□□□ -1.72
COPS3Q9UNS2 TDGF1P1-201ENST00000445734 527 ntBASIC4.33□□□□□ -1.72
COPS3Q9UNS2 AL035551.1-201ENST00000446931 348 ntBASIC4.33□□□□□ -1.72
COPS3Q9UNS2 BUD31P2-201ENST00000449374 300 ntBASIC4.33□□□□□ -1.72
COPS3Q9UNS2 NPM1P39-201ENST00000449818 867 ntBASIC4.33□□□□□ -1.72
COPS3Q9UNS2 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.33□□□□□ -1.72
COPS3Q9UNS2 AC010469.1-201ENST00000463864 576 ntBASIC4.33□□□□□ -1.72
COPS3Q9UNS2 OR2AO1P-201ENST00000476497 403 ntBASIC4.33□□□□□ -1.72
COPS3Q9UNS2 STRADBP1-201ENST00000478954 1281 ntBASIC4.33□□□□□ -1.72
COPS3Q9UNS2 RPS21P4-201ENST00000487122 248 ntBASIC4.33□□□□□ -1.72
COPS3Q9UNS2 AC011411.1-201ENST00000509592 876 ntBASIC4.33□□□□□ -1.72
COPS3Q9UNS2 AC106872.4-201ENST00000510050 523 ntBASIC4.33□□□□□ -1.72
COPS3Q9UNS2 RNA5SP43-201ENST00000516559 110 ntBASIC4.33□□□□□ -1.72
COPS3Q9UNS2 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.33□□□□□ -1.72
COPS3Q9UNS2 IGKV3D-34-201ENST00000522638 302 ntBASIC4.33□□□□□ -1.72
COPS3Q9UNS2 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.33□□□□□ -1.72
COPS3Q9UNS2 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.33□□□□□ -1.72
COPS3Q9UNS2 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.33□□□□□ -1.72
COPS3Q9UNS2 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.33□□□□□ -1.72
COPS3Q9UNS2 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.33□□□□□ -1.72
COPS3Q9UNS2 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
COPS3Q9UNS2 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.33□□□□□ -1.72
COPS3Q9UNS2 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.33□□□□□ -1.72
COPS3Q9UNS2 AL627230.1-201ENST00000613077 211 ntBASIC4.33□□□□□ -1.72
COPS3Q9UNS2 AL591926.8-201ENST00000616876 211 ntBASIC4.33□□□□□ -1.72
COPS3Q9UNS2 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC4.33□□□□□ -1.72
COPS3Q9UNS2 AC009704.2-201ENST00000618739 483 ntBASIC4.33□□□□□ -1.72
COPS3Q9UNS2 AL022401.1-201ENST00000619498 108 ntBASIC4.33□□□□□ -1.72
COPS3Q9UNS2 AC015804.1-201ENST00000622935 435 ntBASIC4.33□□□□□ -1.72
COPS3Q9UNS2 AC099494.2-201ENST00000623371 978 ntBASIC4.33□□□□□ -1.72
COPS3Q9UNS2 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.33□□□□□ -1.72
COPS3Q9UNS2 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
COPS3Q9UNS2 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.33□□□□□ -1.72
COPS3Q9UNS2 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
COPS3Q9UNS2 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
COPS3Q9UNS2 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
COPS3Q9UNS2 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
COPS3Q9UNS2 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
COPS3Q9UNS2 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
COPS3Q9UNS2 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.32□□□□□ -1.72
COPS3Q9UNS2 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.32□□□□□ -1.72
COPS3Q9UNS2 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
COPS3Q9UNS2 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
COPS3Q9UNS2 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
COPS3Q9UNS2 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
COPS3Q9UNS2 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
COPS3Q9UNS2 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
COPS3Q9UNS2 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
COPS3Q9UNS2 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.32□□□□□ -1.72
COPS3Q9UNS2 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
COPS3Q9UNS2 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
COPS3Q9UNS2 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.32□□□□□ -1.72
COPS3Q9UNS2 MAPK10-303ENST00000641324 3959 ntBASIC4.32□□□□□ -1.72
COPS3Q9UNS2 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
COPS3Q9UNS2 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
COPS3Q9UNS2 ST13P16-201ENST00000401760 781 ntBASIC4.32□□□□□ -1.72
COPS3Q9UNS2 AL136116.2-201ENST00000404020 785 ntBASIC4.32□□□□□ -1.72
COPS3Q9UNS2 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.32□□□□□ -1.72
COPS3Q9UNS2 AL590806.1-201ENST00000415818 853 ntBASIC4.32□□□□□ -1.72
COPS3Q9UNS2 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.32□□□□□ -1.72
COPS3Q9UNS2 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
COPS3Q9UNS2 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
COPS3Q9UNS2 NDUFA5P1-201ENST00000433858 341 ntBASIC4.32□□□□□ -1.72
COPS3Q9UNS2 PA2G4P6-201ENST00000438325 1197 ntBASIC4.32□□□□□ -1.72
COPS3Q9UNS2 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.32□□□□□ -1.72
COPS3Q9UNS2 AC005008.1-201ENST00000456151 612 ntBASIC4.32□□□□□ -1.72
COPS3Q9UNS2 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.32□□□□□ -1.72
COPS3Q9UNS2 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.32□□□□□ -1.72
COPS3Q9UNS2 EIF2S2P4-201ENST00000461070 984 ntBASIC4.32□□□□□ -1.72
COPS3Q9UNS2 AC097484.1-201ENST00000471148 389 ntBASIC4.32□□□□□ -1.72
COPS3Q9UNS2 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.32□□□□□ -1.72
COPS3Q9UNS2 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.32□□□□□ -1.72
COPS3Q9UNS2 AC024558.1-201ENST00000505008 528 ntBASIC4.32□□□□□ -1.72
COPS3Q9UNS2 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.32□□□□□ -1.72
COPS3Q9UNS2 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.32□□□□□ -1.72
COPS3Q9UNS2 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.32□□□□□ -1.72
COPS3Q9UNS2 PDCD5P1-201ENST00000543528 309 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms