Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 RPL7P38-201ENST00000488396 739 ntBASIC6.26□□□□□ -1.41
TRIM55Q9BYV6 DSTNP2-201ENST00000504533 515 ntBASIC6.26□□□□□ -1.41
TRIM55Q9BYV6 AC093870.1-201ENST00000506837 213 ntBASIC6.26□□□□□ -1.41
TRIM55Q9BYV6 AC025674.1-201ENST00000507074 324 ntBASIC6.26□□□□□ -1.41
TRIM55Q9BYV6 RPS27AP18-201ENST00000515536 459 ntBASIC6.26□□□□□ -1.41
TRIM55Q9BYV6 RNA5SP400-201ENST00000517155 111 ntBASIC6.26□□□□□ -1.41
TRIM55Q9BYV6 RNU6-1261P-201ENST00000517194 104 ntBASIC6.26□□□□□ -1.41
TRIM55Q9BYV6 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC6.26□□□□□ -1.41
TRIM55Q9BYV6 NAT2-202ENST00000520116 716 ntTSL 3 BASIC6.26□□□□□ -1.41
TRIM55Q9BYV6 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC6.26□□□□□ -1.41
TRIM55Q9BYV6 SMARCE1P4-201ENST00000523647 241 ntBASIC6.26□□□□□ -1.41
TRIM55Q9BYV6 AC084121.1-201ENST00000533882 835 ntBASIC6.26□□□□□ -1.41
TRIM55Q9BYV6 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC6.26□□□□□ -1.41
TRIM55Q9BYV6 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.26□□□□□ -1.41
TRIM55Q9BYV6 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC6.26□□□□□ -1.41
TRIM55Q9BYV6 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.26□□□□□ -1.41
TRIM55Q9BYV6 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC6.26□□□□□ -1.41
TRIM55Q9BYV6 AC016839.1-201ENST00000578162 867 ntBASIC6.26□□□□□ -1.41
TRIM55Q9BYV6 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC6.26□□□□□ -1.41
TRIM55Q9BYV6 AC091133.5-201ENST00000603088 301 ntBASIC6.26□□□□□ -1.41
TRIM55Q9BYV6 AC091946.2-201ENST00000606105 291 ntBASIC6.26□□□□□ -1.41
TRIM55Q9BYV6 AL355816.1-201ENST00000607951 118 ntBASIC6.26□□□□□ -1.41
TRIM55Q9BYV6 RN7SL261P-201ENST00000613441 282 ntBASIC6.26□□□□□ -1.41
TRIM55Q9BYV6 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC6.26□□□□□ -1.41
TRIM55Q9BYV6 AC003992.1-201ENST00000635364 557 ntBASIC6.26□□□□□ -1.41
TRIM55Q9BYV6 AC010325.3-201ENST00000641084 394 ntBASIC6.26□□□□□ -1.41
TRIM55Q9BYV6 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM55Q9BYV6 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM55Q9BYV6 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM55Q9BYV6 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.26□□□□□ -1.41
TRIM55Q9BYV6 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.26□□□□□ -1.41
TRIM55Q9BYV6 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.26□□□□□ -1.41
TRIM55Q9BYV6 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
TRIM55Q9BYV6 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM55Q9BYV6 CDR1-202ENST00000625883 1485 ntBASIC6.26□□□□□ -1.41
TRIM55Q9BYV6 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC6.26□□□□□ -1.41
TRIM55Q9BYV6 MRRFP1-201ENST00000435941 1675 ntBASIC6.26□□□□□ -1.41
TRIM55Q9BYV6 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM55Q9BYV6 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM55Q9BYV6 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
TRIM55Q9BYV6 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC6.25□□□□□ -1.41
TRIM55Q9BYV6 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
TRIM55Q9BYV6 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TRIM55Q9BYV6 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
TRIM55Q9BYV6 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TRIM55Q9BYV6 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TRIM55Q9BYV6 PPIAP24-201ENST00000328558 471 ntBASIC6.25□□□□□ -1.41
TRIM55Q9BYV6 RNU6-115P-201ENST00000364310 107 ntBASIC6.25□□□□□ -1.41
TRIM55Q9BYV6 RNA5SP77-201ENST00000365394 120 ntBASIC6.25□□□□□ -1.41
TRIM55Q9BYV6 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
TRIM55Q9BYV6 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
TRIM55Q9BYV6 SNORA26.8-201ENST00000391306 124 ntBASIC6.25□□□□□ -1.41
TRIM55Q9BYV6 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
TRIM55Q9BYV6 AL355379.1-201ENST00000405542 640 ntBASIC6.25□□□□□ -1.41
TRIM55Q9BYV6 GSTM3P2-201ENST00000412746 530 ntBASIC6.25□□□□□ -1.41
TRIM55Q9BYV6 AL590399.2-201ENST00000427536 309 ntBASIC6.25□□□□□ -1.41
TRIM55Q9BYV6 MTCYBP39-201ENST00000437562 491 ntBASIC6.25□□□□□ -1.41
TRIM55Q9BYV6 EIF5AP4-201ENST00000441206 465 ntBASIC6.25□□□□□ -1.41
TRIM55Q9BYV6 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TRIM55Q9BYV6 NDUFA5P7-201ENST00000452914 242 ntBASIC6.25□□□□□ -1.41
TRIM55Q9BYV6 MTCO3P11-201ENST00000455103 774 ntBASIC6.25□□□□□ -1.41
TRIM55Q9BYV6 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC6.25□□□□□ -1.41
TRIM55Q9BYV6 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC6.25□□□□□ -1.41
TRIM55Q9BYV6 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC6.25□□□□□ -1.41
TRIM55Q9BYV6 RPL5P14-201ENST00000494197 878 ntBASIC6.25□□□□□ -1.41
TRIM55Q9BYV6 AC008945.1-201ENST00000505144 499 ntBASIC6.25□□□□□ -1.41
TRIM55Q9BYV6 MTCO3P7-201ENST00000510008 774 ntBASIC6.25□□□□□ -1.41
TRIM55Q9BYV6 LTV1P1-201ENST00000510683 1237 ntBASIC6.25□□□□□ -1.41
TRIM55Q9BYV6 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.25□□□□□ -1.41
TRIM55Q9BYV6 RNY4P37-201ENST00000516225 96 ntBASIC6.25□□□□□ -1.41
TRIM55Q9BYV6 SNORA48.10-201ENST00000516965 160 ntBASIC6.25□□□□□ -1.41
TRIM55Q9BYV6 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC6.25□□□□□ -1.41
TRIM55Q9BYV6 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC6.25□□□□□ -1.41
TRIM55Q9BYV6 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TRIM55Q9BYV6 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.25□□□□□ -1.41
TRIM55Q9BYV6 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC6.25□□□□□ -1.41
TRIM55Q9BYV6 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC6.25□□□□□ -1.41
TRIM55Q9BYV6 MYLK-221ENST00000583087 678 ntTSL 4 BASIC6.25□□□□□ -1.41
TRIM55Q9BYV6 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC6.25□□□□□ -1.41
TRIM55Q9BYV6 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC6.25□□□□□ -1.41
TRIM55Q9BYV6 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC6.25□□□□□ -1.41
TRIM55Q9BYV6 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC6.25□□□□□ -1.41
TRIM55Q9BYV6 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC6.25□□□□□ -1.41
TRIM55Q9BYV6 RN7SKP299-201ENST00000606679 301 ntBASIC6.25□□□□□ -1.41
TRIM55Q9BYV6 AL008723.3-201ENST00000608926 449 ntBASIC6.25□□□□□ -1.41
TRIM55Q9BYV6 AL136097.3-201ENST00000611097 505 ntBASIC6.25□□□□□ -1.41
TRIM55Q9BYV6 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC6.25□□□□□ -1.41
TRIM55Q9BYV6 AL031667.3-201ENST00000620124 655 ntBASIC6.25□□□□□ -1.41
TRIM55Q9BYV6 PDCD6IPP1-202ENST00000622242 1064 ntBASIC6.25□□□□□ -1.41
TRIM55Q9BYV6 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC6.25□□□□□ -1.41
TRIM55Q9BYV6 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC6.25□□□□□ -1.41
TRIM55Q9BYV6 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC6.25□□□□□ -1.41
TRIM55Q9BYV6 AC026634.1-201ENST00000634369 198 ntBASIC6.25□□□□□ -1.41
TRIM55Q9BYV6 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TRIM55Q9BYV6 GUCY1B2-204ENST00000531898 1979 ntBASIC6.25□□□□□ -1.41
TRIM55Q9BYV6 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
TRIM55Q9BYV6 LINC01613-201ENST00000561476 2780 ntBASIC6.25□□□□□ -1.41
TRIM55Q9BYV6 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TRIM55Q9BYV6 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
TRIM55Q9BYV6 AC025470.1-201ENST00000510053 2032 ntBASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms