Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC7.33□□□□□ -1.24
RNF135Q8IUD6 IGKV3D-34-201ENST00000522638 302 ntBASIC7.33□□□□□ -1.24
RNF135Q8IUD6 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC7.33□□□□□ -1.24
RNF135Q8IUD6 RN7SL199P-201ENST00000578752 281 ntBASIC7.33□□□□□ -1.24
RNF135Q8IUD6 RN7SL656P-201ENST00000579044 281 ntBASIC7.33□□□□□ -1.24
RNF135Q8IUD6 RN7SL270P-201ENST00000579643 281 ntBASIC7.33□□□□□ -1.24
RNF135Q8IUD6 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC7.33□□□□□ -1.24
RNF135Q8IUD6 NRBF2P1-201ENST00000587407 859 ntBASIC7.33□□□□□ -1.24
RNF135Q8IUD6 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC7.33□□□□□ -1.24
RNF135Q8IUD6 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC7.33□□□□□ -1.24
RNF135Q8IUD6 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC7.33□□□□□ -1.24
RNF135Q8IUD6 PACRG-211ENST00000621363 360 ntTSL 5 BASIC7.33□□□□□ -1.24
RNF135Q8IUD6 AC005514.1-201ENST00000623521 208 ntBASIC7.33□□□□□ -1.24
RNF135Q8IUD6 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
RNF135Q8IUD6 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
RNF135Q8IUD6 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
RNF135Q8IUD6 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RNF135Q8IUD6 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RNF135Q8IUD6 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC7.33□□□□□ -1.24
RNF135Q8IUD6 ARHGAP42P4-201ENST00000549782 2934 ntBASIC7.33□□□□□ -1.24
RNF135Q8IUD6 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
RNF135Q8IUD6 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RNF135Q8IUD6 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RNF135Q8IUD6 C1D-202ENST00000407324 1379 ntTSL 3 BASIC7.33□□□□□ -1.24
RNF135Q8IUD6 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC7.33□□□□□ -1.24
RNF135Q8IUD6 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RNF135Q8IUD6 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
RNF135Q8IUD6 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
RNF135Q8IUD6 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
RNF135Q8IUD6 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
RNF135Q8IUD6 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
RNF135Q8IUD6 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
RNF135Q8IUD6 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC7.32□□□□□ -1.24
RNF135Q8IUD6 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC7.32□□□□□ -1.24
RNF135Q8IUD6 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
RNF135Q8IUD6 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
RNF135Q8IUD6 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC7.32□□□□□ -1.24
RNF135Q8IUD6 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
RNF135Q8IUD6 SNRPEP2-201ENST00000397592 279 ntBASIC7.32□□□□□ -1.24
RNF135Q8IUD6 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC7.32□□□□□ -1.24
RNF135Q8IUD6 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC7.32□□□□□ -1.24
RNF135Q8IUD6 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC7.32□□□□□ -1.24
RNF135Q8IUD6 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC7.32□□□□□ -1.24
RNF135Q8IUD6 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC7.32□□□□□ -1.24
RNF135Q8IUD6 AL513304.1-201ENST00000432987 359 ntTSL 3 BASIC7.32□□□□□ -1.24
RNF135Q8IUD6 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC7.32□□□□□ -1.24
RNF135Q8IUD6 ANAPC5-204ENST00000441917 2147 ntTSL 5 BASIC7.32□□□□□ -1.24
RNF135Q8IUD6 CALM1P1-201ENST00000442082 433 ntBASIC7.32□□□□□ -1.24
RNF135Q8IUD6 USP9YP15-201ENST00000442391 422 ntBASIC7.32□□□□□ -1.24
RNF135Q8IUD6 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC7.32□□□□□ -1.24
RNF135Q8IUD6 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC7.32□□□□□ -1.24
RNF135Q8IUD6 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC7.32□□□□□ -1.24
RNF135Q8IUD6 RPL23P10-201ENST00000468780 412 ntBASIC7.32□□□□□ -1.24
RNF135Q8IUD6 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC7.32□□□□□ -1.24
RNF135Q8IUD6 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
RNF135Q8IUD6 RN7SKP196-201ENST00000516267 345 ntBASIC7.32□□□□□ -1.24
RNF135Q8IUD6 RPL10P18-201ENST00000519384 309 ntBASIC7.32□□□□□ -1.24
RNF135Q8IUD6 HIGD1AP6-201ENST00000521833 279 ntBASIC7.32□□□□□ -1.24
RNF135Q8IUD6 IGLVI-42-201ENST00000522485 381 ntBASIC7.32□□□□□ -1.24
RNF135Q8IUD6 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC7.32□□□□□ -1.24
RNF135Q8IUD6 AL845552.1-201ENST00000556820 323 ntBASIC7.32□□□□□ -1.24
RNF135Q8IUD6 AC013283.1-201ENST00000557282 492 ntBASIC7.32□□□□□ -1.24
RNF135Q8IUD6 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC7.32□□□□□ -1.24
RNF135Q8IUD6 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC7.32□□□□□ -1.24
RNF135Q8IUD6 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
RNF135Q8IUD6 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
RNF135Q8IUD6 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC7.32□□□□□ -1.24
RNF135Q8IUD6 RPL12P25-202ENST00000598100 674 ntBASIC7.32□□□□□ -1.24
RNF135Q8IUD6 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC7.32□□□□□ -1.24
RNF135Q8IUD6 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
RNF135Q8IUD6 AL365204.3-201ENST00000612448 685 ntBASIC7.32□□□□□ -1.24
RNF135Q8IUD6 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC7.32□□□□□ -1.24
RNF135Q8IUD6 MAPK10-241ENST00000639234 2985 ntTSL 5 BASIC7.32□□□□□ -1.24
RNF135Q8IUD6 RNF6P1-201ENST00000444889 1784 ntBASIC7.32□□□□□ -1.24
RNF135Q8IUD6 CFAP65-201ENST00000295729 2259 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
RNF135Q8IUD6 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
RNF135Q8IUD6 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC7.32□□□□□ -1.24
RNF135Q8IUD6 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
RNF135Q8IUD6 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
RNF135Q8IUD6 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
RNF135Q8IUD6 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
RNF135Q8IUD6 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
RNF135Q8IUD6 ASNSP1-204ENST00000641977 1664 ntBASIC7.32□□□□□ -1.24
RNF135Q8IUD6 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
RNF135Q8IUD6 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
RNF135Q8IUD6 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
RNF135Q8IUD6 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC7.31□□□□□ -1.24
RNF135Q8IUD6 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC7.31□□□□□ -1.24
RNF135Q8IUD6 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
RNF135Q8IUD6 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
RNF135Q8IUD6 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
RNF135Q8IUD6 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC7.31□□□□□ -1.24
RNF135Q8IUD6 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
RNF135Q8IUD6 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
RNF135Q8IUD6 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
RNF135Q8IUD6 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC7.31□□□□□ -1.24
RNF135Q8IUD6 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC7.31□□□□□ -1.24
RNF135Q8IUD6 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
RNF135Q8IUD6 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
RNF135Q8IUD6 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms