Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HIST1H1AQ02539 MIR365B-201ENST00000362317 111 ntBASIC3.67□□□□□ -1.82
HIST1H1AQ02539 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
HIST1H1AQ02539 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HIST1H1AQ02539 AL391361.1-201ENST00000405580 489 ntBASIC3.67□□□□□ -1.82
HIST1H1AQ02539 U3.35-201ENST00000408405 208 ntBASIC3.67□□□□□ -1.82
HIST1H1AQ02539 U3.36-201ENST00000408418 213 ntBASIC3.67□□□□□ -1.82
HIST1H1AQ02539 AF186996.5-201ENST00000418098 904 ntBASIC3.67□□□□□ -1.82
HIST1H1AQ02539 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC3.67□□□□□ -1.82
HIST1H1AQ02539 AL353597.2-202ENST00000434901 373 ntBASIC3.67□□□□□ -1.82
HIST1H1AQ02539 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HIST1H1AQ02539 AL163193.1-201ENST00000444895 788 ntBASIC3.67□□□□□ -1.82
HIST1H1AQ02539 AC099063.2-201ENST00000446360 662 ntBASIC3.67□□□□□ -1.82
HIST1H1AQ02539 KNOP1P3-201ENST00000446933 426 ntBASIC3.67□□□□□ -1.82
HIST1H1AQ02539 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC3.67□□□□□ -1.82
HIST1H1AQ02539 AC022431.1-201ENST00000450941 438 ntBASIC3.67□□□□□ -1.82
HIST1H1AQ02539 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC3.67□□□□□ -1.82
HIST1H1AQ02539 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC3.67□□□□□ -1.82
HIST1H1AQ02539 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC3.67□□□□□ -1.82
HIST1H1AQ02539 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC3.67□□□□□ -1.82
HIST1H1AQ02539 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HIST1H1AQ02539 AC079841.1-201ENST00000481228 950 ntBASIC3.67□□□□□ -1.82
HIST1H1AQ02539 RN7SL558P-201ENST00000497468 299 ntBASIC3.67□□□□□ -1.82
HIST1H1AQ02539 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC3.67□□□□□ -1.82
HIST1H1AQ02539 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
HIST1H1AQ02539 MTHFD2P4-201ENST00000515074 1025 ntBASIC3.67□□□□□ -1.82
HIST1H1AQ02539 RNA5SP43-201ENST00000516559 110 ntBASIC3.67□□□□□ -1.82
HIST1H1AQ02539 snoU109.6-201ENST00000516831 118 ntBASIC3.67□□□□□ -1.82
HIST1H1AQ02539 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC3.67□□□□□ -1.82
HIST1H1AQ02539 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC3.67□□□□□ -1.82
HIST1H1AQ02539 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC3.67□□□□□ -1.82
HIST1H1AQ02539 OR11J2P-201ENST00000555298 907 ntBASIC3.67□□□□□ -1.82
HIST1H1AQ02539 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HIST1H1AQ02539 AC010547.7-201ENST00000570323 333 ntBASIC3.67□□□□□ -1.82
HIST1H1AQ02539 SNORA74C-1-201ENST00000580726 201 ntBASIC3.67□□□□□ -1.82
HIST1H1AQ02539 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC3.67□□□□□ -1.82
HIST1H1AQ02539 ELOCP28-201ENST00000590044 317 ntBASIC3.67□□□□□ -1.82
HIST1H1AQ02539 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
HIST1H1AQ02539 MIR6768-201ENST00000610734 72 ntBASIC3.67□□□□□ -1.82
HIST1H1AQ02539 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HIST1H1AQ02539 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC3.67□□□□□ -1.82
HIST1H1AQ02539 AC004232.3-201ENST00000622977 525 ntBASIC3.67□□□□□ -1.82
HIST1H1AQ02539 AC005086.4-201ENST00000623065 213 ntBASIC3.67□□□□□ -1.82
HIST1H1AQ02539 AC243960.7-201ENST00000623532 707 ntBASIC3.67□□□□□ -1.82
HIST1H1AQ02539 AC087821.1-201ENST00000623639 567 ntBASIC3.67□□□□□ -1.82
HIST1H1AQ02539 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HIST1H1AQ02539 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HIST1H1AQ02539 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
HIST1H1AQ02539 PABPC1P6-201ENST00000445594 1829 ntBASIC3.67□□□□□ -1.82
HIST1H1AQ02539 AL356489.2-201ENST00000566968 3528 ntBASIC3.67□□□□□ -1.82
HIST1H1AQ02539 HCFC2P1-201ENST00000392864 1592 ntBASIC3.67□□□□□ -1.82
HIST1H1AQ02539 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HIST1H1AQ02539 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HIST1H1AQ02539 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.66□□□□□ -1.82
HIST1H1AQ02539 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HIST1H1AQ02539 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
HIST1H1AQ02539 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HIST1H1AQ02539 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
HIST1H1AQ02539 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HIST1H1AQ02539 AL451142.2-201ENST00000429076 2090 ntBASIC3.66□□□□□ -1.82
HIST1H1AQ02539 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HIST1H1AQ02539 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
HIST1H1AQ02539 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
HIST1H1AQ02539 RPL23P2-201ENST00000320371 421 ntBASIC3.66□□□□□ -1.82
HIST1H1AQ02539 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
HIST1H1AQ02539 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
HIST1H1AQ02539 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.66□□□□□ -1.82
HIST1H1AQ02539 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC3.66□□□□□ -1.82
HIST1H1AQ02539 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC3.66□□□□□ -1.82
HIST1H1AQ02539 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC3.66□□□□□ -1.82
HIST1H1AQ02539 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.66□□□□□ -1.82
HIST1H1AQ02539 RGS17P1-201ENST00000423358 553 ntBASIC3.66□□□□□ -1.82
HIST1H1AQ02539 RPS27P18-201ENST00000431701 247 ntBASIC3.66□□□□□ -1.82
HIST1H1AQ02539 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC3.66□□□□□ -1.82
HIST1H1AQ02539 AC004938.1-201ENST00000438468 308 ntBASIC3.66□□□□□ -1.82
HIST1H1AQ02539 RPL34P20-201ENST00000442771 351 ntBASIC3.66□□□□□ -1.82
HIST1H1AQ02539 AC104306.1-201ENST00000449702 371 ntBASIC3.66□□□□□ -1.82
HIST1H1AQ02539 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.66□□□□□ -1.82
HIST1H1AQ02539 ATP5A1P7-201ENST00000453978 1279 ntBASIC3.66□□□□□ -1.82
HIST1H1AQ02539 APOA2-207ENST00000470459 416 ntTSL 5 BASIC3.66□□□□□ -1.82
HIST1H1AQ02539 COPS8P2-201ENST00000473228 627 ntBASIC3.66□□□□□ -1.82
HIST1H1AQ02539 OR2A3P-201ENST00000493774 953 ntBASIC3.66□□□□□ -1.82
HIST1H1AQ02539 SNRPCP2-201ENST00000504370 475 ntBASIC3.66□□□□□ -1.82
HIST1H1AQ02539 RNA5SP392-201ENST00000516905 112 ntBASIC3.66□□□□□ -1.82
HIST1H1AQ02539 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC3.66□□□□□ -1.82
HIST1H1AQ02539 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC3.66□□□□□ -1.82
HIST1H1AQ02539 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC3.66□□□□□ -1.82
HIST1H1AQ02539 AC022832.1-201ENST00000530718 645 ntBASIC3.66□□□□□ -1.82
HIST1H1AQ02539 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC3.66□□□□□ -1.82
HIST1H1AQ02539 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC3.66□□□□□ -1.82
HIST1H1AQ02539 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC3.66□□□□□ -1.82
HIST1H1AQ02539 MIR4310-201ENST00000582950 57 ntBASIC3.66□□□□□ -1.82
HIST1H1AQ02539 AL139286.1-201ENST00000604465 483 ntBASIC3.66□□□□□ -1.82
HIST1H1AQ02539 IGKV2OR2-2-201ENST00000605025 300 ntBASIC3.66□□□□□ -1.82
HIST1H1AQ02539 AC004948.1-201ENST00000609858 672 ntBASIC3.66□□□□□ -1.82
HIST1H1AQ02539 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.66□□□□□ -1.82
HIST1H1AQ02539 AL159169.2-201ENST00000610061 1269 ntBASIC3.66□□□□□ -1.82
HIST1H1AQ02539 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HIST1H1AQ02539 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.66□□□□□ -1.82
HIST1H1AQ02539 AL669942.2-201ENST00000620352 697 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms