Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
COPAP53621 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
COPAP53621 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.63□□□□□ -1.51
COPAP53621 ZNF849P-201ENST00000594711 1566 ntBASIC5.63□□□□□ -1.51
COPAP53621 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
COPAP53621 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
COPAP53621 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
COPAP53621 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
COPAP53621 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
COPAP53621 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
COPAP53621 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
COPAP53621 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
COPAP53621 RNU4-44P-201ENST00000363050 141 ntBASIC5.63□□□□□ -1.51
COPAP53621 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
COPAP53621 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.63□□□□□ -1.51
COPAP53621 AL133482.1-201ENST00000415988 498 ntBASIC5.63□□□□□ -1.51
COPAP53621 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC5.63□□□□□ -1.51
COPAP53621 SLC35E1P1-201ENST00000419313 864 ntBASIC5.63□□□□□ -1.51
COPAP53621 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.63□□□□□ -1.51
COPAP53621 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC5.63□□□□□ -1.51
COPAP53621 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.63□□□□□ -1.51
COPAP53621 AC092447.3-201ENST00000426027 686 ntBASIC5.63□□□□□ -1.51
COPAP53621 AC009784.1-201ENST00000426484 460 ntBASIC5.63□□□□□ -1.51
COPAP53621 NANOGP4-201ENST00000427230 913 ntBASIC5.63□□□□□ -1.51
COPAP53621 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.63□□□□□ -1.51
COPAP53621 AL035246.1-201ENST00000433554 1255 ntBASIC5.63□□□□□ -1.51
COPAP53621 CYCSP6-201ENST00000434498 302 ntBASIC5.63□□□□□ -1.51
COPAP53621 PTMAP6-201ENST00000439110 327 ntBASIC5.63□□□□□ -1.51
COPAP53621 AL359265.1-201ENST00000440296 795 ntBASIC5.63□□□□□ -1.51
COPAP53621 FHP1-201ENST00000442741 703 ntBASIC5.63□□□□□ -1.51
COPAP53621 ELOCP13-201ENST00000443934 329 ntBASIC5.63□□□□□ -1.51
COPAP53621 HSFY3P-201ENST00000444242 1191 ntBASIC5.63□□□□□ -1.51
COPAP53621 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC5.63□□□□□ -1.51
COPAP53621 AC243772.1-201ENST00000451620 410 ntBASIC5.63□□□□□ -1.51
COPAP53621 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.63□□□□□ -1.51
COPAP53621 CCNB1IP1P3-201ENST00000454702 829 ntBASIC5.63□□□□□ -1.51
COPAP53621 RN7SL172P-201ENST00000460535 303 ntBASIC5.63□□□□□ -1.51
COPAP53621 AC005532.2-201ENST00000467154 373 ntBASIC5.63□□□□□ -1.51
COPAP53621 AC004815.1-201ENST00000484185 331 ntBASIC5.63□□□□□ -1.51
COPAP53621 CDC42P3-201ENST00000518493 633 ntBASIC5.63□□□□□ -1.51
COPAP53621 EEF1A1P37-201ENST00000522748 715 ntBASIC5.63□□□□□ -1.51
COPAP53621 AC138832.1-201ENST00000522871 556 ntBASIC5.63□□□□□ -1.51
COPAP53621 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.63□□□□□ -1.51
COPAP53621 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.63□□□□□ -1.51
COPAP53621 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.63□□□□□ -1.51
COPAP53621 AC126177.5-201ENST00000549599 178 ntBASIC5.63□□□□□ -1.51
COPAP53621 AL132857.1-201ENST00000555180 708 ntBASIC5.63□□□□□ -1.51
COPAP53621 AC044860.2-201ENST00000561005 179 ntBASIC5.63□□□□□ -1.51
COPAP53621 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC5.63□□□□□ -1.51
COPAP53621 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC5.63□□□□□ -1.51
COPAP53621 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC5.63□□□□□ -1.51
COPAP53621 AP001160.4-201ENST00000596971 382 ntBASIC5.63□□□□□ -1.51
COPAP53621 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.63□□□□□ -1.51
COPAP53621 AP002906.1-201ENST00000603405 233 ntBASIC5.63□□□□□ -1.51
COPAP53621 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC5.63□□□□□ -1.51
COPAP53621 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.63□□□□□ -1.51
COPAP53621 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.63□□□□□ -1.51
COPAP53621 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
COPAP53621 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
COPAP53621 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.63□□□□□ -1.51
COPAP53621 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
COPAP53621 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
COPAP53621 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
COPAP53621 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.63□□□□□ -1.51
COPAP53621 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
COPAP53621 MAPK10-338ENST00000641647 3362 ntBASIC5.63□□□□□ -1.51
COPAP53621 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.62□□□□□ -1.51
COPAP53621 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.62□□□□□ -1.51
COPAP53621 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
COPAP53621 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.62□□□□□ -1.51
COPAP53621 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
COPAP53621 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COPAP53621 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.62□□□□□ -1.51
COPAP53621 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COPAP53621 RNA5SP27-201ENST00000363839 119 ntBASIC5.62□□□□□ -1.51
COPAP53621 BMS1P3-201ENST00000372011 932 ntBASIC5.62□□□□□ -1.51
COPAP53621 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
COPAP53621 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.62□□□□□ -1.51
COPAP53621 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COPAP53621 RNU6-185P-201ENST00000384421 107 ntBASIC5.62□□□□□ -1.51
COPAP53621 SNORA70-201ENST00000384436 135 ntBASIC5.62□□□□□ -1.51
COPAP53621 AL390774.1-201ENST00000411924 246 ntBASIC5.62□□□□□ -1.51
COPAP53621 HMGB3P31-201ENST00000413333 595 ntBASIC5.62□□□□□ -1.51
COPAP53621 SSR1P2-201ENST00000415208 787 ntBASIC5.62□□□□□ -1.51
COPAP53621 LIPT1P1-201ENST00000415870 1186 ntBASIC5.62□□□□□ -1.51
COPAP53621 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC5.62□□□□□ -1.51
COPAP53621 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.62□□□□□ -1.51
COPAP53621 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC5.62□□□□□ -1.51
COPAP53621 AL139148.1-201ENST00000427122 680 ntBASIC5.62□□□□□ -1.51
COPAP53621 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.62□□□□□ -1.51
COPAP53621 MTCO1P52-201ENST00000433928 531 ntBASIC5.62□□□□□ -1.51
COPAP53621 CLUHP1-201ENST00000435012 1190 ntBASIC5.62□□□□□ -1.51
COPAP53621 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.62□□□□□ -1.51
COPAP53621 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.62□□□□□ -1.51
COPAP53621 EEF1B2P5-201ENST00000444820 548 ntBASIC5.62□□□□□ -1.51
COPAP53621 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.62□□□□□ -1.51
COPAP53621 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC5.62□□□□□ -1.51
COPAP53621 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.62□□□□□ -1.51
COPAP53621 SBDSP1-204ENST00000453858 737 ntBASIC5.62□□□□□ -1.51
COPAP53621 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms