Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.6
CHMP24386 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
CHMP24386 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.09□□□□□ -1.6
CHMP24386 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.09□□□□□ -1.6
CHMP24386 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
CHMP24386 ZNF849P-201ENST00000594711 1566 ntBASIC5.08□□□□□ -1.6
CHMP24386 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
CHMP24386 AL451142.2-201ENST00000429076 2090 ntBASIC5.08□□□□□ -1.6
CHMP24386 BTBD10P1-201ENST00000549824 1352 ntBASIC5.08□□□□□ -1.6
CHMP24386 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
CHMP24386 AC235565.1-201ENST00000456962 1325 ntBASIC5.08□□□□□ -1.6
CHMP24386 AC104446.1-201ENST00000613728 1321 ntBASIC5.08□□□□□ -1.6
CHMP24386 ADAM5-202ENST00000399789 1942 ntBASIC5.08□□□□□ -1.6
CHMP24386 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CHMP24386 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.08□□□□□ -1.6
CHMP24386 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.08□□□□□ -1.6
CHMP24386 RNU6-1339P-201ENST00000363574 91 ntBASIC5.08□□□□□ -1.6
CHMP24386 RN7SKP124-201ENST00000364730 341 ntBASIC5.08□□□□□ -1.6
CHMP24386 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CHMP24386 DNAJC19P6-201ENST00000401853 280 ntBASIC5.08□□□□□ -1.6
CHMP24386 PPIAP9-201ENST00000403866 498 ntBASIC5.08□□□□□ -1.6
CHMP24386 AL512430.2-201ENST00000406786 339 ntBASIC5.08□□□□□ -1.6
CHMP24386 RPL31P52-201ENST00000407532 367 ntBASIC5.08□□□□□ -1.6
CHMP24386 RN7SKP229-201ENST00000410465 302 ntBASIC5.08□□□□□ -1.6
CHMP24386 AC019050.1-201ENST00000418508 492 ntBASIC5.08□□□□□ -1.6
CHMP24386 AC246680.2-201ENST00000422106 389 ntBASIC5.08□□□□□ -1.6
CHMP24386 RPL12P34-201ENST00000424532 479 ntBASIC5.08□□□□□ -1.6
CHMP24386 AL158073.1-201ENST00000426848 1104 ntBASIC5.08□□□□□ -1.6
CHMP24386 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.08□□□□□ -1.6
CHMP24386 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC5.08□□□□□ -1.6
CHMP24386 AC006335.2-201ENST00000437993 330 ntBASIC5.08□□□□□ -1.6
CHMP24386 TCEA1P3-201ENST00000443005 880 ntBASIC5.08□□□□□ -1.6
CHMP24386 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.08□□□□□ -1.6
CHMP24386 SPRYD7P1-201ENST00000443861 570 ntBASIC5.08□□□□□ -1.6
CHMP24386 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.08□□□□□ -1.6
CHMP24386 AC044797.1-201ENST00000445744 679 ntBASIC5.08□□□□□ -1.6
CHMP24386 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.08□□□□□ -1.6
CHMP24386 DNAJC19P8-201ENST00000452887 259 ntBASIC5.08□□□□□ -1.6
CHMP24386 RN7SL515P-201ENST00000463999 297 ntBASIC5.08□□□□□ -1.6
CHMP24386 MTND6P6-201ENST00000478031 263 ntBASIC5.08□□□□□ -1.6
CHMP24386 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.08□□□□□ -1.6
CHMP24386 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.08□□□□□ -1.6
CHMP24386 DUTP7-201ENST00000507982 486 ntBASIC5.08□□□□□ -1.6
CHMP24386 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC5.08□□□□□ -1.6
CHMP24386 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
CHMP24386 BX510359.5-201ENST00000515651 304 ntBASIC5.08□□□□□ -1.6
CHMP24386 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.08□□□□□ -1.6
CHMP24386 AP003066.2-201ENST00000529375 555 ntBASIC5.08□□□□□ -1.6
CHMP24386 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.08□□□□□ -1.6
CHMP24386 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC5.08□□□□□ -1.6
CHMP24386 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.08□□□□□ -1.6
CHMP24386 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.08□□□□□ -1.6
CHMP24386 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.08□□□□□ -1.6
CHMP24386 MRPS21P7-201ENST00000566937 238 ntBASIC5.08□□□□□ -1.6
CHMP24386 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.08□□□□□ -1.6
CHMP24386 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.08□□□□□ -1.6
CHMP24386 AC100847.1-201ENST00000611316 481 ntBASIC5.08□□□□□ -1.6
CHMP24386 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.08□□□□□ -1.6
CHMP24386 CDRT1-208ENST00000630868 794 ntBASIC5.08□□□□□ -1.6
CHMP24386 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CHMP24386 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.08□□□□□ -1.6
CHMP24386 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CHMP24386 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
CHMP24386 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
CHMP24386 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CHMP24386 AC100757.1-201ENST00000616872 1835 ntBASIC5.08□□□□□ -1.6
CHMP24386 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.08□□□□□ -1.6
CHMP24386 AL360270.2-201ENST00000562952 5985 ntBASIC5.08□□□□□ -1.6
CHMP24386 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CHMP24386 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CHMP24386 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.08□□□□□ -1.6
CHMP24386 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CHMP24386 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.08□□□□□ -1.6
CHMP24386 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CHMP24386 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.08□□□□□ -1.6
CHMP24386 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CHMP24386 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.08□□□□□ -1.6
CHMP24386 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CHMP24386 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.08□□□□□ -1.6
CHMP24386 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CHMP24386 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CHMP24386 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CHMP24386 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
CHMP24386 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CHMP24386 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CHMP24386 USP9YP4-201ENST00000424401 1745 ntBASIC5.07□□□□□ -1.6
CHMP24386 AC114546.3-201ENST00000623582 1734 ntBASIC5.07□□□□□ -1.6
CHMP24386 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CHMP24386 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.07□□□□□ -1.6
CHMP24386 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CHMP24386 RN7SKP160-201ENST00000363804 340 ntBASIC5.07□□□□□ -1.6
CHMP24386 RN7SKP224-201ENST00000364140 325 ntBASIC5.07□□□□□ -1.6
CHMP24386 RNU4-2-201ENST00000365668 141 ntBASIC5.07□□□□□ -1.6
CHMP24386 U6.112-201ENST00000384129 70 ntBASIC5.07□□□□□ -1.6
CHMP24386 MIR551A-201ENST00000385042 96 ntBASIC5.07□□□□□ -1.6
CHMP24386 SNORD65C-201ENST00000390962 71 ntBASIC5.07□□□□□ -1.6
CHMP24386 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC5.07□□□□□ -1.6
CHMP24386 RPSAP35-201ENST00000413753 818 ntBASIC5.07□□□□□ -1.6
CHMP24386 COX5BP7-201ENST00000414780 274 ntBASIC5.07□□□□□ -1.6
CHMP24386 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms