Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CHRNA1P02708 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.23□□□□□ -1.57
CHRNA1P02708 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CHRNA1P02708 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC5.23□□□□□ -1.57
CHRNA1P02708 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CHRNA1P02708 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CHRNA1P02708 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
CHRNA1P02708 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
CHRNA1P02708 RNU6-729P-201ENST00000384399 107 ntBASIC5.23□□□□□ -1.57
CHRNA1P02708 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CHRNA1P02708 RNU1-82P-201ENST00000390851 165 ntBASIC5.23□□□□□ -1.57
CHRNA1P02708 CCL7-202ENST00000394627 696 ntTSL 3 BASIC5.23□□□□□ -1.57
CHRNA1P02708 COX5BP7-201ENST00000414780 274 ntBASIC5.23□□□□□ -1.57
CHRNA1P02708 AL355994.1-201ENST00000424379 260 ntBASIC5.23□□□□□ -1.57
CHRNA1P02708 RPL12P28-201ENST00000430852 489 ntBASIC5.23□□□□□ -1.57
CHRNA1P02708 AC073143.1-201ENST00000436316 395 ntBASIC5.23□□□□□ -1.57
CHRNA1P02708 AL450263.2-201ENST00000439400 589 ntBASIC5.23□□□□□ -1.57
CHRNA1P02708 TXNP2-201ENST00000443918 295 ntBASIC5.23□□□□□ -1.57
CHRNA1P02708 EIF2S2P2-201ENST00000447161 982 ntBASIC5.23□□□□□ -1.57
CHRNA1P02708 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.23□□□□□ -1.57
CHRNA1P02708 RNU1-6P-201ENST00000516290 144 ntBASIC5.23□□□□□ -1.57
CHRNA1P02708 AC025857.1-201ENST00000525252 377 ntBASIC5.23□□□□□ -1.57
CHRNA1P02708 HNRNPRP2-201ENST00000528421 743 ntBASIC5.23□□□□□ -1.57
CHRNA1P02708 AC068831.4-201ENST00000556118 109 ntBASIC5.23□□□□□ -1.57
CHRNA1P02708 PARP1P2-201ENST00000556806 195 ntBASIC5.23□□□□□ -1.57
CHRNA1P02708 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC5.23□□□□□ -1.57
CHRNA1P02708 RN7SL652P-201ENST00000577769 300 ntBASIC5.23□□□□□ -1.57
CHRNA1P02708 AL356218.2-201ENST00000605264 187 ntBASIC5.23□□□□□ -1.57
CHRNA1P02708 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.23□□□□□ -1.57
CHRNA1P02708 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CHRNA1P02708 AC025574.1-201ENST00000554784 1653 ntBASIC5.23□□□□□ -1.57
CHRNA1P02708 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CHRNA1P02708 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CHRNA1P02708 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CHRNA1P02708 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
CHRNA1P02708 AL592148.3-201ENST00000608771 2646 ntBASIC5.23□□□□□ -1.57
CHRNA1P02708 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.22□□□□□ -1.57
CHRNA1P02708 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
CHRNA1P02708 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CHRNA1P02708 AC011447.7-201ENST00000624228 1590 ntBASIC5.22□□□□□ -1.57
CHRNA1P02708 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CHRNA1P02708 IGKV7-3-201ENST00000357453 298 ntBASIC5.22□□□□□ -1.57
CHRNA1P02708 RNA5SP447-201ENST00000363749 119 ntBASIC5.22□□□□□ -1.57
CHRNA1P02708 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC5.22□□□□□ -1.57
CHRNA1P02708 AC140479.3-201ENST00000418944 1126 ntBASIC5.22□□□□□ -1.57
CHRNA1P02708 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.22□□□□□ -1.57
CHRNA1P02708 AL592293.2-201ENST00000422292 996 ntBASIC5.22□□□□□ -1.57
CHRNA1P02708 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC5.22□□□□□ -1.57
CHRNA1P02708 MTND4LP12-201ENST00000448237 295 ntBASIC5.22□□□□□ -1.57
CHRNA1P02708 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.22□□□□□ -1.57
CHRNA1P02708 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5.22□□□□□ -1.57
CHRNA1P02708 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.22□□□□□ -1.57
CHRNA1P02708 AC023424.1-201ENST00000496058 459 ntBASIC5.22□□□□□ -1.57
CHRNA1P02708 AC025674.1-201ENST00000507074 324 ntBASIC5.22□□□□□ -1.57
CHRNA1P02708 Y_RNA.719-201ENST00000517156 106 ntBASIC5.22□□□□□ -1.57
CHRNA1P02708 RNU6-709P-201ENST00000517257 104 ntBASIC5.22□□□□□ -1.57
CHRNA1P02708 AP002981.1-201ENST00000517692 975 ntBASIC5.22□□□□□ -1.57
CHRNA1P02708 AC040958.1-201ENST00000561102 201 ntBASIC5.22□□□□□ -1.57
CHRNA1P02708 ATP5J2P6-201ENST00000565203 266 ntBASIC5.22□□□□□ -1.57
CHRNA1P02708 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.22□□□□□ -1.57
CHRNA1P02708 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC5.22□□□□□ -1.57
CHRNA1P02708 AL590392.1-201ENST00000604960 446 ntBASIC5.22□□□□□ -1.57
CHRNA1P02708 NF1P10-201ENST00000613227 742 ntBASIC5.22□□□□□ -1.57
CHRNA1P02708 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.22□□□□□ -1.57
CHRNA1P02708 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
CHRNA1P02708 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.22□□□□□ -1.57
CHRNA1P02708 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CHRNA1P02708 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CHRNA1P02708 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CHRNA1P02708 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CHRNA1P02708 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CHRNA1P02708 AC022417.1-201ENST00000624768 1303 ntBASIC5.22□□□□□ -1.57
CHRNA1P02708 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.22□□□□□ -1.57
CHRNA1P02708 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.21□□□□□ -1.57
CHRNA1P02708 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
CHRNA1P02708 ADAM5-202ENST00000399789 1942 ntBASIC5.21□□□□□ -1.57
CHRNA1P02708 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.21□□□□□ -1.58
CHRNA1P02708 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CHRNA1P02708 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC5.21□□□□□ -1.58
CHRNA1P02708 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CHRNA1P02708 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CHRNA1P02708 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CHRNA1P02708 RNU6-1331P-201ENST00000363658 106 ntBASIC5.21□□□□□ -1.58
CHRNA1P02708 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.21□□□□□ -1.58
CHRNA1P02708 OR51B3P-201ENST00000412287 913 ntBASIC5.21□□□□□ -1.58
CHRNA1P02708 PCNPP4-201ENST00000414817 517 ntBASIC5.21□□□□□ -1.58
CHRNA1P02708 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.21□□□□□ -1.58
CHRNA1P02708 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.21□□□□□ -1.58
CHRNA1P02708 RSL24D1P6-201ENST00000426934 401 ntBASIC5.21□□□□□ -1.58
CHRNA1P02708 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.21□□□□□ -1.58
CHRNA1P02708 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.21□□□□□ -1.58
CHRNA1P02708 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC5.21□□□□□ -1.58
CHRNA1P02708 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.21□□□□□ -1.58
CHRNA1P02708 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.21□□□□□ -1.58
CHRNA1P02708 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.21□□□□□ -1.58
CHRNA1P02708 MTND2P28-201ENST00000457540 1044 ntBASIC5.21□□□□□ -1.58
CHRNA1P02708 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC5.21□□□□□ -1.58
CHRNA1P02708 AC068587.1-201ENST00000483613 781 ntBASIC5.21□□□□□ -1.58
CHRNA1P02708 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.21□□□□□ -1.58
CHRNA1P02708 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms