Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 AC012507.3-201ENST00000603556 477 ntBASIC7.66□□□□□ -1.18
ALDH1A1P00352 AC245014.2-201ENST00000603689 287 ntBASIC7.66□□□□□ -1.18
ALDH1A1P00352 AC246785.4-201ENST00000605374 287 ntBASIC7.66□□□□□ -1.18
ALDH1A1P00352 SNORA74.4-201ENST00000607595 199 ntBASIC7.66□□□□□ -1.18
ALDH1A1P00352 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC7.66□□□□□ -1.18
ALDH1A1P00352 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC7.66□□□□□ -1.18
ALDH1A1P00352 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
ALDH1A1P00352 DRG1-207ENST00000629688 309 ntTSL 5 BASIC7.66□□□□□ -1.18
ALDH1A1P00352 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC7.66□□□□□ -1.18
ALDH1A1P00352 EEF1A1P42-201ENST00000613436 1331 ntBASIC7.66□□□□□ -1.18
ALDH1A1P00352 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
ALDH1A1P00352 CYP1D1P-201ENST00000416662 1433 ntBASIC7.66□□□□□ -1.18
ALDH1A1P00352 BRD8-203ENST00000402931 2982 ntTSL 5 BASIC7.66□□□□□ -1.18
ALDH1A1P00352 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
ALDH1A1P00352 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
ALDH1A1P00352 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
ALDH1A1P00352 ENOX1-AS1-201ENST00000444442 3907 ntTSL 5 BASIC7.66□□□□□ -1.18
ALDH1A1P00352 ARMC3-203ENST00000409049 2479 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
ALDH1A1P00352 BMX-203ENST00000357607 2598 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.18
ALDH1A1P00352 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
ALDH1A1P00352 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC7.65□□□□□ -1.18
ALDH1A1P00352 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
ALDH1A1P00352 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
ALDH1A1P00352 HKR1-201ENST00000324411 2929 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.18
ALDH1A1P00352 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
ALDH1A1P00352 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
ALDH1A1P00352 Y_RNA.157-201ENST00000363638 102 ntBASIC7.65□□□□□ -1.18
ALDH1A1P00352 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC7.65□□□□□ -1.18
ALDH1A1P00352 LAMP2-202ENST00000371335 4030 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
ALDH1A1P00352 Y_RNA.579-201ENST00000390939 94 ntBASIC7.65□□□□□ -1.18
ALDH1A1P00352 AL590762.1-201ENST00000391782 432 ntBASIC7.65□□□□□ -1.18
ALDH1A1P00352 HMGB3P18-201ENST00000406327 590 ntBASIC7.65□□□□□ -1.18
ALDH1A1P00352 RPL5P18-201ENST00000406671 891 ntBASIC7.65□□□□□ -1.18
ALDH1A1P00352 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC7.65□□□□□ -1.18
ALDH1A1P00352 AC007394.1-201ENST00000421941 531 ntBASIC7.65□□□□□ -1.18
ALDH1A1P00352 AC006065.1-201ENST00000422539 802 ntBASIC7.65□□□□□ -1.18
ALDH1A1P00352 Z82205.1-201ENST00000428456 297 ntBASIC7.65□□□□□ -1.18
ALDH1A1P00352 CYCSP11-201ENST00000436426 315 ntBASIC7.65□□□□□ -1.18
ALDH1A1P00352 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC7.65□□□□□ -1.18
ALDH1A1P00352 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC7.65□□□□□ -1.18
ALDH1A1P00352 AC079448.1-201ENST00000449377 373 ntBASIC7.65□□□□□ -1.18
ALDH1A1P00352 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC7.65□□□□□ -1.18
ALDH1A1P00352 CECR9-201ENST00000453421 199 ntBASIC7.65□□□□□ -1.18
ALDH1A1P00352 RNU7-157P-201ENST00000459600 66 ntBASIC7.65□□□□□ -1.18
ALDH1A1P00352 SNORD19B-201ENST00000459623 84 ntBASIC7.65□□□□□ -1.18
ALDH1A1P00352 AC023194.2-201ENST00000465398 406 ntBASIC7.65□□□□□ -1.18
ALDH1A1P00352 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
ALDH1A1P00352 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC7.65□□□□□ -1.18
ALDH1A1P00352 AC007998.1-201ENST00000474156 672 ntBASIC7.65□□□□□ -1.18
ALDH1A1P00352 AC006539.1-201ENST00000481419 501 ntBASIC7.65□□□□□ -1.18
ALDH1A1P00352 SETP14-201ENST00000497538 873 ntBASIC7.65□□□□□ -1.18
ALDH1A1P00352 AC116535.1-201ENST00000499765 2335 ntTSL 2 BASIC7.65□□□□□ -1.18
ALDH1A1P00352 AC114981.1-201ENST00000503897 678 ntBASIC7.65□□□□□ -1.18
ALDH1A1P00352 AC145138.1-201ENST00000512908 2851 ntBASIC7.65□□□□□ -1.18
ALDH1A1P00352 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
ALDH1A1P00352 AC026801.2-201ENST00000515352 425 ntBASIC7.65□□□□□ -1.18
ALDH1A1P00352 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC7.65□□□□□ -1.18
ALDH1A1P00352 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
ALDH1A1P00352 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC7.65□□□□□ -1.18
ALDH1A1P00352 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC7.65□□□□□ -1.18
ALDH1A1P00352 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC7.65□□□□□ -1.18
ALDH1A1P00352 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC7.65□□□□□ -1.18
ALDH1A1P00352 IGHVIII-67-4-201ENST00000524281 296 ntBASIC7.65□□□□□ -1.18
ALDH1A1P00352 AL133399.1-201ENST00000527476 298 ntBASIC7.65□□□□□ -1.18
ALDH1A1P00352 AC022878.1-201ENST00000530684 149 ntBASIC7.65□□□□□ -1.18
ALDH1A1P00352 HTATIP2-207ENST00000532081 774 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
ALDH1A1P00352 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC7.65□□□□□ -1.18
ALDH1A1P00352 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC7.65□□□□□ -1.18
ALDH1A1P00352 AC079905.1-201ENST00000549280 475 ntBASIC7.65□□□□□ -1.18
ALDH1A1P00352 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
ALDH1A1P00352 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC7.65□□□□□ -1.18
ALDH1A1P00352 AC136618.2-201ENST00000575091 400 ntBASIC7.65□□□□□ -1.18
ALDH1A1P00352 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC7.65□□□□□ -1.18
ALDH1A1P00352 KPNA2P3-201ENST00000584190 848 ntBASIC7.65□□□□□ -1.18
ALDH1A1P00352 AC009977.1-201ENST00000586015 570 ntBASIC7.65□□□□□ -1.18
ALDH1A1P00352 AC011453.2-201ENST00000603737 729 ntBASIC7.65□□□□□ -1.18
ALDH1A1P00352 AL391646.1-201ENST00000603860 190 ntBASIC7.65□□□□□ -1.18
ALDH1A1P00352 AC112191.3-201ENST00000604371 277 ntBASIC7.65□□□□□ -1.18
ALDH1A1P00352 AC004890.3-201ENST00000605566 1095 ntBASIC7.65□□□□□ -1.18
ALDH1A1P00352 AC090948.2-201ENST00000607363 564 ntBASIC7.65□□□□□ -1.18
ALDH1A1P00352 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC7.65□□□□□ -1.18
ALDH1A1P00352 AC073488.2-201ENST00000631903 751 ntBASIC7.65□□□□□ -1.18
ALDH1A1P00352 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.19
ALDH1A1P00352 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
ALDH1A1P00352 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC7.65□□□□□ -1.19
ALDH1A1P00352 GPM6A-202ENST00000393658 2821 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
ALDH1A1P00352 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC7.65□□□□□ -1.19
ALDH1A1P00352 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.19
ALDH1A1P00352 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC7.65□□□□□ -1.19
ALDH1A1P00352 NAPEPLD-209ENST00000465647 2380 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
ALDH1A1P00352 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC7.64□□□□□ -1.19
ALDH1A1P00352 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC7.64□□□□□ -1.19
ALDH1A1P00352 USPL1-201ENST00000255304 3814 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
ALDH1A1P00352 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
ALDH1A1P00352 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
ALDH1A1P00352 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
ALDH1A1P00352 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
ALDH1A1P00352 PART1-203ENST00000515734 2569 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
ALDH1A1P00352 GINS4-201ENST00000276533 3841 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
ALDH1A1P00352 MIR369-201ENST00000362155 70 ntBASIC7.64□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms