Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
CNOT4O95628 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC5.66□□□□□ -1.5
CNOT4O95628 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CNOT4O95628 PARP4P2-201ENST00000446672 3326 ntBASIC5.66□□□□□ -1.5
CNOT4O95628 DMD-222ENST00000474231 5209 ntTSL 5 BASIC5.66□□□□□ -1.5
CNOT4O95628 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CNOT4O95628 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CNOT4O95628 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CNOT4O95628 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
CNOT4O95628 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CNOT4O95628 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
CNOT4O95628 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.66□□□□□ -1.5
CNOT4O95628 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC5.66□□□□□ -1.5
CNOT4O95628 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
CNOT4O95628 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
CNOT4O95628 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CNOT4O95628 AC093311.1-201ENST00000506586 2021 ntBASIC5.66□□□□□ -1.5
CNOT4O95628 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CNOT4O95628 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CNOT4O95628 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CNOT4O95628 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC5.66□□□□□ -1.5
CNOT4O95628 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CNOT4O95628 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CNOT4O95628 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CNOT4O95628 AL035419.1-201ENST00000397037 564 ntBASIC5.66□□□□□ -1.5
CNOT4O95628 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
CNOT4O95628 YWHAZP6-201ENST00000399764 738 ntBASIC5.66□□□□□ -1.5
CNOT4O95628 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC5.66□□□□□ -1.5
CNOT4O95628 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.66□□□□□ -1.5
CNOT4O95628 AL157884.1-201ENST00000424561 454 ntBASIC5.66□□□□□ -1.5
CNOT4O95628 IPMKP1-201ENST00000425988 855 ntBASIC5.66□□□□□ -1.5
CNOT4O95628 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.66□□□□□ -1.5
CNOT4O95628 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.66□□□□□ -1.5
CNOT4O95628 MTCO3P21-201ENST00000430791 643 ntBASIC5.66□□□□□ -1.5
CNOT4O95628 AC108479.1-201ENST00000431142 427 ntBASIC5.66□□□□□ -1.5
CNOT4O95628 IGLV3-4-201ENST00000432300 244 ntBASIC5.66□□□□□ -1.5
CNOT4O95628 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.66□□□□□ -1.5
CNOT4O95628 AL451136.1-201ENST00000435399 325 ntBASIC5.66□□□□□ -1.5
CNOT4O95628 RPL23AP76-201ENST00000441860 458 ntBASIC5.66□□□□□ -1.5
CNOT4O95628 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.66□□□□□ -1.5
CNOT4O95628 RHEBP2-201ENST00000450289 600 ntBASIC5.66□□□□□ -1.5
CNOT4O95628 KATNBL1P6-201ENST00000453433 915 ntBASIC5.66□□□□□ -1.5
CNOT4O95628 Z83838.1-202ENST00000456225 839 ntBASIC5.66□□□□□ -1.5
CNOT4O95628 CDC42P1-201ENST00000456658 548 ntBASIC5.66□□□□□ -1.5
CNOT4O95628 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC5.66□□□□□ -1.5
CNOT4O95628 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC5.66□□□□□ -1.5
CNOT4O95628 RPL23AP12-201ENST00000467573 473 ntBASIC5.66□□□□□ -1.5
CNOT4O95628 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.66□□□□□ -1.5
CNOT4O95628 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC5.66□□□□□ -1.5
CNOT4O95628 FABP5P5-201ENST00000515537 406 ntBASIC5.66□□□□□ -1.5
CNOT4O95628 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CNOT4O95628 RNA5SP418-201ENST00000515951 117 ntBASIC5.66□□□□□ -1.5
CNOT4O95628 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.66□□□□□ -1.5
CNOT4O95628 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.66□□□□□ -1.5
CNOT4O95628 IGHV1-14-201ENST00000523391 241 ntBASIC5.66□□□□□ -1.5
CNOT4O95628 AC084337.1-201ENST00000524809 686 ntBASIC5.66□□□□□ -1.5
CNOT4O95628 AP001317.1-201ENST00000531194 960 ntBASIC5.66□□□□□ -1.5
CNOT4O95628 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC5.66□□□□□ -1.5
CNOT4O95628 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.66□□□□□ -1.5
CNOT4O95628 OR4G1P-201ENST00000588632 938 ntBASIC5.66□□□□□ -1.5
CNOT4O95628 AL356055.1-201ENST00000602528 446 ntBASIC5.66□□□□□ -1.5
CNOT4O95628 AC009237.12-201ENST00000604755 742 ntBASIC5.66□□□□□ -1.5
CNOT4O95628 AC018714.1-201ENST00000605028 208 ntBASIC5.66□□□□□ -1.5
CNOT4O95628 NDUFA8P1-201ENST00000605525 367 ntBASIC5.66□□□□□ -1.5
CNOT4O95628 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.66□□□□□ -1.5
CNOT4O95628 AC007684.1-201ENST00000609671 477 ntBASIC5.66□□□□□ -1.5
CNOT4O95628 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CNOT4O95628 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC5.66□□□□□ -1.5
CNOT4O95628 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CNOT4O95628 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CNOT4O95628 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CNOT4O95628 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.66□□□□□ -1.5
CNOT4O95628 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.66□□□□□ -1.5
CNOT4O95628 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
CNOT4O95628 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.66□□□□□ -1.5
CNOT4O95628 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC5.66□□□□□ -1.5
CNOT4O95628 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CNOT4O95628 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
CNOT4O95628 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.66□□□□□ -1.5
CNOT4O95628 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CNOT4O95628 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CNOT4O95628 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.65□□□□□ -1.5
CNOT4O95628 VN2R3P-201ENST00000422626 1412 ntBASIC5.65□□□□□ -1.5
CNOT4O95628 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.5
CNOT4O95628 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
CNOT4O95628 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CNOT4O95628 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CNOT4O95628 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CNOT4O95628 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.65□□□□□ -1.5
CNOT4O95628 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CNOT4O95628 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.5
CNOT4O95628 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.65□□□□□ -1.5
CNOT4O95628 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
CNOT4O95628 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CNOT4O95628 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CNOT4O95628 TINAG-202ENST00000370864 692 ntTSL 2 BASIC5.65□□□□□ -1.5
CNOT4O95628 RNU6-178P-201ENST00000384631 104 ntBASIC5.65□□□□□ -1.5
CNOT4O95628 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CNOT4O95628 EI24P3-201ENST00000399046 1062 ntBASIC5.65□□□□□ -1.5
CNOT4O95628 RN7SKP281-201ENST00000410472 352 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms