Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.52□□□□□ -1.53
PHGDHO43175 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
PHGDHO43175 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PHGDHO43175 CASC19-206ENST00000641028 1430 ntBASIC5.52□□□□□ -1.53
PHGDHO43175 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PHGDHO43175 NACA3P-201ENST00000359690 648 ntBASIC5.52□□□□□ -1.53
PHGDHO43175 CD2-201ENST00000369477 478 ntTSL 2 BASIC5.52□□□□□ -1.53
PHGDHO43175 SNORA40.2-201ENST00000390847 128 ntBASIC5.52□□□□□ -1.53
PHGDHO43175 ATP5F1P2-201ENST00000398143 760 ntBASIC5.52□□□□□ -1.53
PHGDHO43175 LRRC37BP1-201ENST00000398851 714 ntBASIC5.52□□□□□ -1.53
PHGDHO43175 AL009179.1-201ENST00000406085 265 ntBASIC5.52□□□□□ -1.53
PHGDHO43175 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC5.52□□□□□ -1.53
PHGDHO43175 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC5.52□□□□□ -1.53
PHGDHO43175 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC5.52□□□□□ -1.53
PHGDHO43175 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC5.52□□□□□ -1.53
PHGDHO43175 AC066692.1-201ENST00000421721 457 ntBASIC5.52□□□□□ -1.53
PHGDHO43175 AL035660.1-201ENST00000422041 222 ntBASIC5.52□□□□□ -1.53
PHGDHO43175 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.52□□□□□ -1.53
PHGDHO43175 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC5.52□□□□□ -1.53
PHGDHO43175 IGBP1P3-201ENST00000447449 1000 ntBASIC5.52□□□□□ -1.53
PHGDHO43175 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.52□□□□□ -1.53
PHGDHO43175 HLA-DPA3-207ENST00000454398 229 ntBASIC5.52□□□□□ -1.53
PHGDHO43175 BX248409.1-201ENST00000455497 255 ntBASIC5.52□□□□□ -1.53
PHGDHO43175 ACA64.1-201ENST00000459171 127 ntBASIC5.52□□□□□ -1.53
PHGDHO43175 RN7SL583P-201ENST00000475692 287 ntBASIC5.52□□□□□ -1.53
PHGDHO43175 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.52□□□□□ -1.53
PHGDHO43175 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC5.52□□□□□ -1.53
PHGDHO43175 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC5.52□□□□□ -1.53
PHGDHO43175 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC5.52□□□□□ -1.53
PHGDHO43175 SEPT10P1-201ENST00000517342 1162 ntBASIC5.52□□□□□ -1.53
PHGDHO43175 IGLVIV-64-201ENST00000518581 301 ntBASIC5.52□□□□□ -1.53
PHGDHO43175 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC5.52□□□□□ -1.53
PHGDHO43175 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC5.52□□□□□ -1.53
PHGDHO43175 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.52□□□□□ -1.53
PHGDHO43175 AP000648.1-201ENST00000529682 397 ntBASIC5.52□□□□□ -1.53
PHGDHO43175 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.52□□□□□ -1.53
PHGDHO43175 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.52□□□□□ -1.53
PHGDHO43175 AC092121.1-201ENST00000569452 202 ntBASIC5.52□□□□□ -1.53
PHGDHO43175 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.52□□□□□ -1.53
PHGDHO43175 AC090312.2-201ENST00000582687 378 ntBASIC5.52□□□□□ -1.53
PHGDHO43175 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.52□□□□□ -1.53
PHGDHO43175 AC009237.13-201ENST00000603193 276 ntBASIC5.52□□□□□ -1.53
PHGDHO43175 AL031601.1-201ENST00000605702 394 ntBASIC5.52□□□□□ -1.53
PHGDHO43175 AC099676.1-201ENST00000608886 657 ntBASIC5.52□□□□□ -1.53
PHGDHO43175 AL592148.2-201ENST00000612210 372 ntBASIC5.52□□□□□ -1.53
PHGDHO43175 AC006840.1-201ENST00000623069 542 ntBASIC5.52□□□□□ -1.53
PHGDHO43175 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
PHGDHO43175 AC087821.2-201ENST00000637086 450 ntBASIC5.52□□□□□ -1.53
PHGDHO43175 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.52□□□□□ -1.53
PHGDHO43175 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PHGDHO43175 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PHGDHO43175 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.52□□□□□ -1.53
PHGDHO43175 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PHGDHO43175 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PHGDHO43175 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.52□□□□□ -1.53
PHGDHO43175 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
PHGDHO43175 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.52□□□□□ -1.53
PHGDHO43175 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
PHGDHO43175 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PHGDHO43175 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PHGDHO43175 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
PHGDHO43175 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.51□□□□□ -1.53
PHGDHO43175 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PHGDHO43175 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
PHGDHO43175 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PHGDHO43175 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PHGDHO43175 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PHGDHO43175 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
PHGDHO43175 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
PHGDHO43175 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC5.51□□□□□ -1.53
PHGDHO43175 RN7SKP59-201ENST00000410520 314 ntBASIC5.51□□□□□ -1.53
PHGDHO43175 GPS2P1-201ENST00000411761 986 ntBASIC5.51□□□□□ -1.53
PHGDHO43175 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC5.51□□□□□ -1.53
PHGDHO43175 AL008987.1-201ENST00000415528 237 ntBASIC5.51□□□□□ -1.53
PHGDHO43175 ELOCP9-201ENST00000418624 239 ntBASIC5.51□□□□□ -1.53
PHGDHO43175 RIMKLBP2-201ENST00000424737 654 ntBASIC5.51□□□□□ -1.53
PHGDHO43175 KCTD9P1-201ENST00000430462 1167 ntBASIC5.51□□□□□ -1.53
PHGDHO43175 RPS6P15-201ENST00000431996 751 ntBASIC5.51□□□□□ -1.53
PHGDHO43175 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.51□□□□□ -1.53
PHGDHO43175 RPS7P5-201ENST00000441482 581 ntBASIC5.51□□□□□ -1.53
PHGDHO43175 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.51□□□□□ -1.53
PHGDHO43175 AC233982.1-201ENST00000451247 436 ntBASIC5.51□□□□□ -1.53
PHGDHO43175 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.51□□□□□ -1.53
PHGDHO43175 AC083899.1-201ENST00000454465 3819 ntBASIC5.51□□□□□ -1.53
PHGDHO43175 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.51□□□□□ -1.53
PHGDHO43175 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC5.51□□□□□ -1.53
PHGDHO43175 RN7SL188P-201ENST00000469842 285 ntBASIC5.51□□□□□ -1.53
PHGDHO43175 UBFD1P1-201ENST00000473259 814 ntBASIC5.51□□□□□ -1.53
PHGDHO43175 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.51□□□□□ -1.53
PHGDHO43175 AC084024.2-201ENST00000503480 791 ntBASIC5.51□□□□□ -1.53
PHGDHO43175 AC098799.3-201ENST00000506095 438 ntBASIC5.51□□□□□ -1.53
PHGDHO43175 AC006499.4-201ENST00000510947 694 ntBASIC5.51□□□□□ -1.53
PHGDHO43175 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.51□□□□□ -1.53
PHGDHO43175 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.51□□□□□ -1.53
PHGDHO43175 SNORA3.4-201ENST00000515969 96 ntBASIC5.51□□□□□ -1.53
PHGDHO43175 RNU6-416P-201ENST00000516265 103 ntBASIC5.51□□□□□ -1.53
PHGDHO43175 AC138832.1-201ENST00000522871 556 ntBASIC5.51□□□□□ -1.53
PHGDHO43175 MRPS16P1-201ENST00000523462 412 ntBASIC5.51□□□□□ -1.53
PHGDHO43175 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.51□□□□□ -1.53
PHGDHO43175 AP000859.1-201ENST00000525536 307 ntBASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms