Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC9.32□□□□□ -0.92
PHF8Q9UPP1 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC9.32□□□□□ -0.92
PHF8Q9UPP1 AC013283.1-201ENST00000557282 492 ntBASIC9.32□□□□□ -0.92
PHF8Q9UPP1 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC9.32□□□□□ -0.92
PHF8Q9UPP1 MIR98-201ENST00000606724 119 ntBASIC9.32□□□□□ -0.92
PHF8Q9UPP1 AL451049.1-201ENST00000608672 497 ntBASIC9.32□□□□□ -0.92
PHF8Q9UPP1 AC006924.1-201ENST00000610750 559 ntBASIC9.32□□□□□ -0.92
PHF8Q9UPP1 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC9.32□□□□□ -0.92
PHF8Q9UPP1 MIR6729-201ENST00000618194 65 ntBASIC9.32□□□□□ -0.92
PHF8Q9UPP1 MIR7854-201ENST00000620068 65 ntBASIC9.32□□□□□ -0.92
PHF8Q9UPP1 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
PHF8Q9UPP1 ADGRL3-209ENST00000508693 5009 ntTSL 5 BASIC9.32□□□□□ -0.92
PHF8Q9UPP1 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC9.32□□□□□ -0.92
PHF8Q9UPP1 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
PHF8Q9UPP1 ESRG-201ENST00000583516 3140 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
PHF8Q9UPP1 NT5DC1-201ENST00000319550 6923 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
PHF8Q9UPP1 KIF1B-202ENST00000377081 8746 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
PHF8Q9UPP1 LRRC4C-202ENST00000527150 3085 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
PHF8Q9UPP1 AC020978.6-201ENST00000571197 3177 ntBASIC9.32□□□□□ -0.92
PHF8Q9UPP1 AMOT-204ENST00000371962 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
PHF8Q9UPP1 ZNF840P-201ENST00000504759 1996 ntBASIC9.32□□□□□ -0.92
PHF8Q9UPP1 RSPH4A-201ENST00000229554 2825 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
PHF8Q9UPP1 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC9.31□□□□□ -0.92
PHF8Q9UPP1 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC9.31□□□□□ -0.92
PHF8Q9UPP1 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
PHF8Q9UPP1 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
PHF8Q9UPP1 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
PHF8Q9UPP1 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
PHF8Q9UPP1 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
PHF8Q9UPP1 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
PHF8Q9UPP1 CRB1-210ENST00000538660 3397 ntTSL 2 BASIC9.31□□□□□ -0.92
PHF8Q9UPP1 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC9.31□□□□□ -0.92
PHF8Q9UPP1 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
PHF8Q9UPP1 CDH12-202ENST00000504376 4160 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
PHF8Q9UPP1 CDH8-203ENST00000577390 9721 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
PHF8Q9UPP1 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
PHF8Q9UPP1 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
PHF8Q9UPP1 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
PHF8Q9UPP1 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC9.31□□□□□ -0.92
PHF8Q9UPP1 RNU6-702P-201ENST00000364982 107 ntBASIC9.31□□□□□ -0.92
PHF8Q9UPP1 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
PHF8Q9UPP1 RNU6-1297P-201ENST00000384415 104 ntBASIC9.31□□□□□ -0.92
PHF8Q9UPP1 CISD1P1-201ENST00000393907 327 ntBASIC9.31□□□□□ -0.92
PHF8Q9UPP1 FGFR1OP2P1-201ENST00000395943 500 ntBASIC9.31□□□□□ -0.92
PHF8Q9UPP1 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC9.31□□□□□ -0.92
PHF8Q9UPP1 RPA3-203ENST00000401447 414 ntTSL 3 BASIC9.31□□□□□ -0.92
PHF8Q9UPP1 OR51A3P-201ENST00000413596 924 ntBASIC9.31□□□□□ -0.92
PHF8Q9UPP1 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC9.31□□□□□ -0.92
PHF8Q9UPP1 HSPE1P16-201ENST00000426640 348 ntBASIC9.31□□□□□ -0.92
PHF8Q9UPP1 AC108479.1-201ENST00000431142 427 ntBASIC9.31□□□□□ -0.92
PHF8Q9UPP1 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC9.31□□□□□ -0.92
PHF8Q9UPP1 RPL7AP23-201ENST00000482625 776 ntBASIC9.31□□□□□ -0.92
PHF8Q9UPP1 SCG5-207ENST00000497208 949 ntTSL 5 BASIC9.31□□□□□ -0.92
PHF8Q9UPP1 AC006390.1-201ENST00000508068 283 ntBASIC9.31□□□□□ -0.92
PHF8Q9UPP1 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC9.31□□□□□ -0.92
PHF8Q9UPP1 SCOCP1-201ENST00000554676 349 ntBASIC9.31□□□□□ -0.92
PHF8Q9UPP1 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC9.31□□□□□ -0.92
PHF8Q9UPP1 AC002310.3-201ENST00000569728 723 ntBASIC9.31□□□□□ -0.92
PHF8Q9UPP1 AC006441.3-201ENST00000580121 456 ntTSL 4 BASIC9.31□□□□□ -0.92
PHF8Q9UPP1 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC9.31□□□□□ -0.92
PHF8Q9UPP1 AC011497.2-201ENST00000600255 639 ntBASIC9.31□□□□□ -0.92
PHF8Q9UPP1 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC9.31□□□□□ -0.92
PHF8Q9UPP1 AL732618.1-201ENST00000623251 301 ntBASIC9.31□□□□□ -0.92
PHF8Q9UPP1 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
PHF8Q9UPP1 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC9.31□□□□□ -0.92
PHF8Q9UPP1 AC025574.1-201ENST00000554784 1653 ntBASIC9.31□□□□□ -0.92
PHF8Q9UPP1 AL451064.2-201ENST00000623514 1654 ntBASIC9.31□□□□□ -0.92
PHF8Q9UPP1 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC9.31□□□□□ -0.92
PHF8Q9UPP1 ACKR2-202ENST00000442925 2879 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
PHF8Q9UPP1 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
PHF8Q9UPP1 AP2B1-213ENST00000612116 3483 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
PHF8Q9UPP1 SOX5-202ENST00000381381 3991 ntTSL 5 BASIC9.31□□□□□ -0.92
PHF8Q9UPP1 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
PHF8Q9UPP1 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
PHF8Q9UPP1 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC9.31□□□□□ -0.92
PHF8Q9UPP1 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC9.31□□□□□ -0.92
PHF8Q9UPP1 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC9.31□□□□□ -0.92
PHF8Q9UPP1 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
PHF8Q9UPP1 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
PHF8Q9UPP1 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC9.31□□□□□ -0.92
PHF8Q9UPP1 MAVS-201ENST00000416600 11596 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
PHF8Q9UPP1 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC9.3□□□□□ -0.92
PHF8Q9UPP1 CCDC62-203ENST00000392440 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
PHF8Q9UPP1 PABPC5-201ENST00000312600 3221 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
PHF8Q9UPP1 KCNMA1-212ENST00000406533 5639 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
PHF8Q9UPP1 DDX24-209ENST00000621632 5612 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
PHF8Q9UPP1 MYO10-201ENST00000274203 11456 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
PHF8Q9UPP1 GTF2IRD2P1-201ENST00000449689 2749 ntBASIC9.3□□□□□ -0.92
PHF8Q9UPP1 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
PHF8Q9UPP1 MTCO1P14-201ENST00000441695 1559 ntBASIC9.3□□□□□ -0.92
PHF8Q9UPP1 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
PHF8Q9UPP1 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC9.3□□□□□ -0.92
PHF8Q9UPP1 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC9.3□□□□□ -0.92
PHF8Q9UPP1 LPP-208ENST00000448637 5835 ntTSL 5 BASIC9.3□□□□□ -0.92
PHF8Q9UPP1 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
PHF8Q9UPP1 RNA5SP435-201ENST00000364044 108 ntBASIC9.3□□□□□ -0.92
PHF8Q9UPP1 RNU6-452P-201ENST00000384406 107 ntBASIC9.3□□□□□ -0.92
PHF8Q9UPP1 MIR188-201ENST00000385034 86 ntBASIC9.3□□□□□ -0.92
PHF8Q9UPP1 RPA3-204ENST00000406109 434 ntTSL 3 BASIC9.3□□□□□ -0.92
PHF8Q9UPP1 AL450338.1-201ENST00000407987 512 ntBASIC9.3□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms