Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC1.85□□□□□ -2.11
MACF1Q9UPN3 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
MACF1Q9UPN3 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
MACF1Q9UPN3 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC1.85□□□□□ -2.11
MACF1Q9UPN3 UVSSA-202ENST00000389851 12605 ntAPPRIS P2 TSL 1 (best) BASIC1.85□□□□□ -2.11
MACF1Q9UPN3 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
MACF1Q9UPN3 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
MACF1Q9UPN3 AL035696.2-201ENST00000407941 709 ntBASIC1.85□□□□□ -2.11
MACF1Q9UPN3 AC016027.5-201ENST00000427227 210 ntBASIC1.85□□□□□ -2.11
MACF1Q9UPN3 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC1.85□□□□□ -2.11
MACF1Q9UPN3 AC022360.1-201ENST00000521058 340 ntBASIC1.85□□□□□ -2.11
MACF1Q9UPN3 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC1.85□□□□□ -2.11
MACF1Q9UPN3 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC1.85□□□□□ -2.11
MACF1Q9UPN3 AL360157.1-201ENST00000565962 87 ntBASIC1.85□□□□□ -2.11
MACF1Q9UPN3 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC1.85□□□□□ -2.11
MACF1Q9UPN3 AC006386.2-201ENST00000624491 75 ntBASIC1.85□□□□□ -2.11
MACF1Q9UPN3 AC012005.1-201ENST00000624575 75 ntBASIC1.85□□□□□ -2.11
MACF1Q9UPN3 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
MACF1Q9UPN3 CASC19-243ENST00000641588 1546 ntBASIC1.85□□□□□ -2.11
MACF1Q9UPN3 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC1.85□□□□□ -2.11
MACF1Q9UPN3 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
MACF1Q9UPN3 AC068733.2-201ENST00000605434 1418 ntBASIC1.85□□□□□ -2.11
MACF1Q9UPN3 GRIK3-201ENST00000373091 9101 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
MACF1Q9UPN3 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC1.84□□□□□ -2.11
MACF1Q9UPN3 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.11
MACF1Q9UPN3 AC116036.1-201ENST00000412199 367 ntBASIC1.84□□□□□ -2.11
MACF1Q9UPN3 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC1.84□□□□□ -2.11
MACF1Q9UPN3 AC010095.1-201ENST00000443543 144 ntBASIC1.84□□□□□ -2.11
MACF1Q9UPN3 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC1.84□□□□□ -2.11
MACF1Q9UPN3 AL049794.2-201ENST00000616301 365 ntBASIC1.84□□□□□ -2.11
MACF1Q9UPN3 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC1.84□□□□□ -2.11
MACF1Q9UPN3 PCDH9-202ENST00000377865 5709 ntAPPRIS P4 TSL 1 (best) BASIC1.84□□□□□ -2.11
MACF1Q9UPN3 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC1.84□□□□□ -2.11
MACF1Q9UPN3 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.11
MACF1Q9UPN3 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.11
MACF1Q9UPN3 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC1.84□□□□□ -2.11
MACF1Q9UPN3 FRY-202ENST00000380250 10688 ntTSL 5 BASIC1.84□□□□□ -2.11
MACF1Q9UPN3 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC1.84□□□□□ -2.11
MACF1Q9UPN3 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC1.84□□□□□ -2.11
MACF1Q9UPN3 CHD8-213ENST00000557364 8137 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
MACF1Q9UPN3 ICE2P1-201ENST00000512800 1849 ntBASIC1.84□□□□□ -2.11
MACF1Q9UPN3 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC1.84□□□□□ -2.11
MACF1Q9UPN3 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
MACF1Q9UPN3 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC1.84□□□□□ -2.11
MACF1Q9UPN3 SCARNA20.4-201ENST00000516969 131 ntBASIC1.84□□□□□ -2.11
MACF1Q9UPN3 AP000827.1-201ENST00000527814 258 ntBASIC1.84□□□□□ -2.11
MACF1Q9UPN3 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC1.84□□□□□ -2.11
MACF1Q9UPN3 GNRHR2P1-201ENST00000555315 631 ntBASIC1.84□□□□□ -2.11
MACF1Q9UPN3 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
MACF1Q9UPN3 AL033543.1-201ENST00000623440 13454 ntBASIC1.84□□□□□ -2.11
MACF1Q9UPN3 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
MACF1Q9UPN3 ZBTB40-204ENST00000404138 8992 ntAPPRIS P3 TSL 5 BASIC1.84□□□□□ -2.11
MACF1Q9UPN3 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC1.84□□□□□ -2.11
MACF1Q9UPN3 AC022034.1-201ENST00000512867 2156 ntBASIC1.84□□□□□ -2.11
MACF1Q9UPN3 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
MACF1Q9UPN3 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC1.84□□□□□ -2.11
MACF1Q9UPN3 SNORA38.1-201ENST00000364172 131 ntBASIC1.84□□□□□ -2.11
MACF1Q9UPN3 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
MACF1Q9UPN3 MIR3065-201ENST00000390137 79 ntBASIC1.84□□□□□ -2.11
MACF1Q9UPN3 RPL11P3-201ENST00000395256 523 ntBASIC1.84□□□□□ -2.11
MACF1Q9UPN3 AL390316.1-201ENST00000406279 553 ntBASIC1.84□□□□□ -2.11
MACF1Q9UPN3 AL591503.2-201ENST00000442314 1005 ntBASIC1.84□□□□□ -2.11
MACF1Q9UPN3 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC1.84□□□□□ -2.11
MACF1Q9UPN3 ARL6IP1P3-201ENST00000524544 560 ntBASIC1.84□□□□□ -2.11
MACF1Q9UPN3 AL049779.3-201ENST00000557141 606 ntBASIC1.84□□□□□ -2.11
MACF1Q9UPN3 RPL23AP97-201ENST00000568955 471 ntBASIC1.84□□□□□ -2.11
MACF1Q9UPN3 AL513548.2-201ENST00000602994 1207 ntBASIC1.84□□□□□ -2.11
MACF1Q9UPN3 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
MACF1Q9UPN3 ATE1-AS1-202ENST00000636460 506 ntBASIC1.84□□□□□ -2.11
MACF1Q9UPN3 NUP107-201ENST00000229179 6457 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
MACF1Q9UPN3 PRO1804-201ENST00000623780 2050 ntBASIC1.84□□□□□ -2.11
MACF1Q9UPN3 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
MACF1Q9UPN3 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC1.84□□□□□ -2.11
MACF1Q9UPN3 BMPR1APS1-201ENST00000403332 1598 ntBASIC1.84□□□□□ -2.11
MACF1Q9UPN3 ERC1-213ENST00000543086 9241 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
MACF1Q9UPN3 AC015813.3-201ENST00000584805 6113 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
MACF1Q9UPN3 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC1.84□□□□□ -2.11
MACF1Q9UPN3 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC1.84□□□□□ -2.11
MACF1Q9UPN3 LPP-208ENST00000448637 5835 ntTSL 5 BASIC1.84□□□□□ -2.11
MACF1Q9UPN3 CPM-201ENST00000338356 6636 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
MACF1Q9UPN3 AC108032.1-201ENST00000416706 207 ntBASIC1.84□□□□□ -2.11
MACF1Q9UPN3 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC1.84□□□□□ -2.11
MACF1Q9UPN3 ATP5G1P3-201ENST00000463301 410 ntBASIC1.84□□□□□ -2.11
MACF1Q9UPN3 RNA5SP519-201ENST00000516480 119 ntBASIC1.84□□□□□ -2.11
MACF1Q9UPN3 IGLVVI-25-1-201ENST00000521893 249 ntBASIC1.84□□□□□ -2.11
MACF1Q9UPN3 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
MACF1Q9UPN3 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC1.84□□□□□ -2.11
MACF1Q9UPN3 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC1.84□□□□□ -2.11
MACF1Q9UPN3 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
MACF1Q9UPN3 MTF1-201ENST00000373036 7972 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
MACF1Q9UPN3 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC1.84□□□□□ -2.12
MACF1Q9UPN3 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.12
MACF1Q9UPN3 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC1.84□□□□□ -2.12
MACF1Q9UPN3 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.12
MACF1Q9UPN3 DENND2C-201ENST00000393274 6163 ntTSL 5 BASIC1.84□□□□□ -2.12
MACF1Q9UPN3 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
MACF1Q9UPN3 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
MACF1Q9UPN3 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC1.84□□□□□ -2.12
MACF1Q9UPN3 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC1.84□□□□□ -2.12
MACF1Q9UPN3 MYL12BP2-201ENST00000503948 512 ntBASIC1.84□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms