Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AL390862.1-201ENST00000635467 1469 ntBASIC5.33□□□□□ -1.56
AMBRA1Q9C0C7 AC083899.1-201ENST00000454465 3819 ntBASIC5.33□□□□□ -1.56
AMBRA1Q9C0C7 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.33□□□□□ -1.56
AMBRA1Q9C0C7 SEC63P2-201ENST00000503863 1939 ntBASIC5.33□□□□□ -1.56
AMBRA1Q9C0C7 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
AMBRA1Q9C0C7 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
AMBRA1Q9C0C7 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
AMBRA1Q9C0C7 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
AMBRA1Q9C0C7 METTL21EP-201ENST00000298105 713 ntBASIC5.33□□□□□ -1.56
AMBRA1Q9C0C7 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
AMBRA1Q9C0C7 Y_RNA.436-201ENST00000384097 102 ntBASIC5.33□□□□□ -1.56
AMBRA1Q9C0C7 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.33□□□□□ -1.56
AMBRA1Q9C0C7 VTA1P1-201ENST00000414044 866 ntBASIC5.33□□□□□ -1.56
AMBRA1Q9C0C7 TEX41-202ENST00000414256 604 ntTSL 5 BASIC5.33□□□□□ -1.56
AMBRA1Q9C0C7 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC5.33□□□□□ -1.56
AMBRA1Q9C0C7 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.33□□□□□ -1.56
AMBRA1Q9C0C7 AC079355.1-201ENST00000421770 223 ntBASIC5.33□□□□□ -1.56
AMBRA1Q9C0C7 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.33□□□□□ -1.56
AMBRA1Q9C0C7 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.33□□□□□ -1.56
AMBRA1Q9C0C7 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC5.33□□□□□ -1.56
AMBRA1Q9C0C7 AC234781.2-201ENST00000426370 994 ntBASIC5.33□□□□□ -1.56
AMBRA1Q9C0C7 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
AMBRA1Q9C0C7 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC5.33□□□□□ -1.56
AMBRA1Q9C0C7 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC5.33□□□□□ -1.56
AMBRA1Q9C0C7 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.33□□□□□ -1.56
AMBRA1Q9C0C7 ACA64.1-201ENST00000459171 127 ntBASIC5.33□□□□□ -1.56
AMBRA1Q9C0C7 RPS7P6-201ENST00000485777 579 ntBASIC5.33□□□□□ -1.56
AMBRA1Q9C0C7 OR2A20P-203ENST00000498397 1268 ntBASIC5.33□□□□□ -1.56
AMBRA1Q9C0C7 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.33□□□□□ -1.56
AMBRA1Q9C0C7 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.33□□□□□ -1.56
AMBRA1Q9C0C7 AC138866.2-201ENST00000508650 584 ntBASIC5.33□□□□□ -1.56
AMBRA1Q9C0C7 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC5.33□□□□□ -1.56
AMBRA1Q9C0C7 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.33□□□□□ -1.56
AMBRA1Q9C0C7 SCARNA18.1-201ENST00000516330 83 ntBASIC5.33□□□□□ -1.56
AMBRA1Q9C0C7 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.33□□□□□ -1.56
AMBRA1Q9C0C7 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.33□□□□□ -1.56
AMBRA1Q9C0C7 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC5.33□□□□□ -1.56
AMBRA1Q9C0C7 AC138832.1-201ENST00000522871 556 ntBASIC5.33□□□□□ -1.56
AMBRA1Q9C0C7 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC5.33□□□□□ -1.56
AMBRA1Q9C0C7 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.33□□□□□ -1.56
AMBRA1Q9C0C7 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC5.33□□□□□ -1.56
AMBRA1Q9C0C7 AC137627.1-201ENST00000545761 289 ntBASIC5.33□□□□□ -1.56
AMBRA1Q9C0C7 AC090022.1-201ENST00000546569 311 ntBASIC5.33□□□□□ -1.56
AMBRA1Q9C0C7 AC008126.1-201ENST00000549019 480 ntBASIC5.33□□□□□ -1.56
AMBRA1Q9C0C7 AL359219.2-201ENST00000555184 348 ntBASIC5.33□□□□□ -1.56
AMBRA1Q9C0C7 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.33□□□□□ -1.56
AMBRA1Q9C0C7 AC007225.2-201ENST00000562529 256 ntBASIC5.33□□□□□ -1.56
AMBRA1Q9C0C7 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
AMBRA1Q9C0C7 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.33□□□□□ -1.56
AMBRA1Q9C0C7 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.33□□□□□ -1.56
AMBRA1Q9C0C7 MIR4433B-201ENST00000581329 102 ntBASIC5.33□□□□□ -1.56
AMBRA1Q9C0C7 AC100767.2-201ENST00000604840 693 ntBASIC5.33□□□□□ -1.56
AMBRA1Q9C0C7 AC010632.3-201ENST00000611377 369 ntBASIC5.33□□□□□ -1.56
AMBRA1Q9C0C7 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
AMBRA1Q9C0C7 AC245014.3-201ENST00000618589 347 ntBASIC5.33□□□□□ -1.56
AMBRA1Q9C0C7 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.33□□□□□ -1.56
AMBRA1Q9C0C7 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.33□□□□□ -1.56
AMBRA1Q9C0C7 AL157770.1-201ENST00000623049 439 ntBASIC5.33□□□□□ -1.56
AMBRA1Q9C0C7 AP000550.3-201ENST00000637734 379 ntBASIC5.33□□□□□ -1.56
AMBRA1Q9C0C7 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.33□□□□□ -1.56
AMBRA1Q9C0C7 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.33□□□□□ -1.56
AMBRA1Q9C0C7 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
AMBRA1Q9C0C7 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
AMBRA1Q9C0C7 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
AMBRA1Q9C0C7 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
AMBRA1Q9C0C7 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
AMBRA1Q9C0C7 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
AMBRA1Q9C0C7 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
AMBRA1Q9C0C7 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
AMBRA1Q9C0C7 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
AMBRA1Q9C0C7 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
AMBRA1Q9C0C7 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 AL137141.1-201ENST00000624622 4836 ntBASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 AC008549.2-201ENST00000333482 706 ntBASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 SNORA40.2-201ENST00000390847 128 ntBASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 AL035419.1-201ENST00000397037 564 ntBASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 AP000357.1-201ENST00000409926 1165 ntBASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 HMGN2P27-201ENST00000427352 270 ntBASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 DEFA9P-201ENST00000433042 285 ntBASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 USP9YP28-201ENST00000435142 589 ntBASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 RPL23AP19-201ENST00000436229 369 ntBASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 AC092393.1-201ENST00000439625 742 ntBASIC5.32□□□□□ -1.56
AMBRA1Q9C0C7 AC118469.1-201ENST00000442943 488 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms