Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.96□□□□□ -1.62
TRIM4Q9C037 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
TRIM4Q9C037 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.96□□□□□ -1.62
TRIM4Q9C037 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
TRIM4Q9C037 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
TRIM4Q9C037 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
TRIM4Q9C037 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.96□□□□□ -1.62
TRIM4Q9C037 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
TRIM4Q9C037 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
TRIM4Q9C037 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
TRIM4Q9C037 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
TRIM4Q9C037 AC027290.2-201ENST00000623210 18662 ntBASIC4.96□□□□□ -1.62
TRIM4Q9C037 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
TRIM4Q9C037 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TRIM4Q9C037 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TRIM4Q9C037 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TRIM4Q9C037 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TRIM4Q9C037 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TRIM4Q9C037 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TRIM4Q9C037 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TRIM4Q9C037 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.95□□□□□ -1.62
TRIM4Q9C037 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
TRIM4Q9C037 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.95□□□□□ -1.62
TRIM4Q9C037 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.95□□□□□ -1.62
TRIM4Q9C037 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TRIM4Q9C037 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
TRIM4Q9C037 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.95□□□□□ -1.62
TRIM4Q9C037 RNA5SP87-201ENST00000384155 118 ntBASIC4.95□□□□□ -1.62
TRIM4Q9C037 GLULP6-201ENST00000399502 913 ntBASIC4.95□□□□□ -1.62
TRIM4Q9C037 AL049693.1-201ENST00000402760 611 ntBASIC4.95□□□□□ -1.62
TRIM4Q9C037 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.95□□□□□ -1.62
TRIM4Q9C037 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.95□□□□□ -1.62
TRIM4Q9C037 OR2AM1P-201ENST00000422137 422 ntBASIC4.95□□□□□ -1.62
TRIM4Q9C037 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.95□□□□□ -1.62
TRIM4Q9C037 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
TRIM4Q9C037 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.95□□□□□ -1.62
TRIM4Q9C037 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.95□□□□□ -1.62
TRIM4Q9C037 DEFB109F-201ENST00000491870 277 ntBASIC4.95□□□□□ -1.62
TRIM4Q9C037 DUBR-205ENST00000495228 411 ntTSL 2 BASIC4.95□□□□□ -1.62
TRIM4Q9C037 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TRIM4Q9C037 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.95□□□□□ -1.62
TRIM4Q9C037 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.95□□□□□ -1.62
TRIM4Q9C037 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.95□□□□□ -1.62
TRIM4Q9C037 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.95□□□□□ -1.62
TRIM4Q9C037 AC068831.8-201ENST00000620171 435 ntBASIC4.95□□□□□ -1.62
TRIM4Q9C037 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.95□□□□□ -1.62
TRIM4Q9C037 AC074101.1-201ENST00000637861 241 ntBASIC4.95□□□□□ -1.62
TRIM4Q9C037 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
TRIM4Q9C037 AC138627.1-204ENST00000641894 765 ntBASIC4.95□□□□□ -1.62
TRIM4Q9C037 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TRIM4Q9C037 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TRIM4Q9C037 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TRIM4Q9C037 AC091046.3-201ENST00000631455 1574 ntBASIC4.95□□□□□ -1.62
TRIM4Q9C037 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
TRIM4Q9C037 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
TRIM4Q9C037 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.94□□□□□ -1.62
TRIM4Q9C037 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.94□□□□□ -1.62
TRIM4Q9C037 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
TRIM4Q9C037 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
TRIM4Q9C037 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.94□□□□□ -1.62
TRIM4Q9C037 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.94□□□□□ -1.62
TRIM4Q9C037 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
TRIM4Q9C037 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
TRIM4Q9C037 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC4.94□□□□□ -1.62
TRIM4Q9C037 MIR708-201ENST00000390708 88 ntBASIC4.94□□□□□ -1.62
TRIM4Q9C037 AC119751.6-201ENST00000416712 186 ntBASIC4.94□□□□□ -1.62
TRIM4Q9C037 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.94□□□□□ -1.62
TRIM4Q9C037 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC4.94□□□□□ -1.62
TRIM4Q9C037 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.94□□□□□ -1.62
TRIM4Q9C037 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC4.94□□□□□ -1.62
TRIM4Q9C037 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.94□□□□□ -1.62
TRIM4Q9C037 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC4.94□□□□□ -1.62
TRIM4Q9C037 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.94□□□□□ -1.62
TRIM4Q9C037 RPL7P16-201ENST00000479738 738 ntBASIC4.94□□□□□ -1.62
TRIM4Q9C037 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.94□□□□□ -1.62
TRIM4Q9C037 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
TRIM4Q9C037 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.94□□□□□ -1.62
TRIM4Q9C037 RNA5SP249-201ENST00000516127 99 ntBASIC4.94□□□□□ -1.62
TRIM4Q9C037 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
TRIM4Q9C037 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.94□□□□□ -1.62
TRIM4Q9C037 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.94□□□□□ -1.62
TRIM4Q9C037 AP000919.1-201ENST00000582850 985 ntBASIC4.94□□□□□ -1.62
TRIM4Q9C037 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.94□□□□□ -1.62
TRIM4Q9C037 AC011487.3-201ENST00000593607 453 ntBASIC4.94□□□□□ -1.62
TRIM4Q9C037 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.94□□□□□ -1.62
TRIM4Q9C037 AC093799.2-201ENST00000610062 578 ntBASIC4.94□□□□□ -1.62
TRIM4Q9C037 AC108359.1-201ENST00000616451 1211 ntBASIC4.94□□□□□ -1.62
TRIM4Q9C037 OR8G7P-201ENST00000616658 848 ntBASIC4.94□□□□□ -1.62
TRIM4Q9C037 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
TRIM4Q9C037 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
TRIM4Q9C037 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
TRIM4Q9C037 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
TRIM4Q9C037 MFSD8-220ENST00000641243 1422 ntBASIC4.94□□□□□ -1.62
TRIM4Q9C037 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
TRIM4Q9C037 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
TRIM4Q9C037 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.94□□□□□ -1.62
TRIM4Q9C037 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.94□□□□□ -1.62
TRIM4Q9C037 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
TRIM4Q9C037 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
TRIM4Q9C037 AC108751.5-201ENST00000492880 1336 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms